Sync from SUSE:SLFO:Main python-Bottleneck revision 93f9b474d1e397b83ee2100ad6be3499
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## Default LFS
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*.7z filter=lfs diff=lfs merge=lfs -text
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*.bsp filter=lfs diff=lfs merge=lfs -text
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*.bz2 filter=lfs diff=lfs merge=lfs -text
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*.tgz filter=lfs diff=lfs merge=lfs -text
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*.txz filter=lfs diff=lfs merge=lfs -text
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*.whl filter=lfs diff=lfs merge=lfs -text
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*.xz filter=lfs diff=lfs merge=lfs -text
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*.zip filter=lfs diff=lfs merge=lfs -text
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*.zst filter=lfs diff=lfs merge=lfs -text
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BIN
Bottleneck-1.3.7.tar.gz
(Stored with Git LFS)
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BIN
Bottleneck-1.3.7.tar.gz
(Stored with Git LFS)
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282
python-Bottleneck.changes
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python-Bottleneck.changes
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-------------------------------------------------------------------
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||||||
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Tue Mar 14 22:42:33 UTC 2023 - Dirk Müller <dmueller@suse.com>
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||||||
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||||||
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- update to 1.3.7:
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||||||
|
* Python 3.11 wheel available
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||||||
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||||||
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-------------------------------------------------------------------
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||||||
|
Fri Jan 20 15:18:50 UTC 2023 - Dirk Müller <dmueller@suse.com>
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||||||
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|
||||||
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- update to 1.3.6:
|
||||||
|
* Fix ValueError: cannot convert float NaN to integer with new numpy
|
||||||
|
version
|
||||||
|
* Python 3.6 wheel won't be built anymore because of the deprecation in
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||||||
|
the associated Python Github action
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-------------------------------------------------------------------
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Fri Dec 23 17:21:43 UTC 2022 - Ben Greiner <code@bnavigator.de>
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||||||
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- Skip a failing test -- gh#pydata/bottleneck#423
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- Add rpmlintrc
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-------------------------------------------------------------------
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Sun Aug 14 15:00:35 UTC 2022 - Arun Persaud <arun@gmx.de>
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||||||
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|
||||||
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- update to version 1.3.5:
|
||||||
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* Bug Fixes
|
||||||
|
+ Fix numpy deprecation of non-tuple indices
|
||||||
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* Enhancements
|
||||||
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+ Switch build to manylinux_2_24_x86_64 using cibuildwheel
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||||||
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||||||
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-------------------------------------------------------------------
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Sat Mar 12 05:34:03 UTC 2022 - Arun Persaud <arun@gmx.de>
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|
||||||
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- specfile:
|
||||||
|
* update copyright year
|
||||||
|
|
||||||
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- update to version 1.3.4:
|
||||||
|
* Bug Fixes
|
||||||
|
+ Fix Memory leak with big-endian data
|
||||||
|
|
||||||
|
- changes from version 1.3.3:
|
||||||
|
* Bug Fixes
|
||||||
|
+ Fix Python 3.10 build
|
||||||
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* Enhancements
|
||||||
|
+ Provide pre-compiled wheels for most x86_64 architectures
|
||||||
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||||||
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-------------------------------------------------------------------
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||||||
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Wed Feb 17 22:59:05 UTC 2021 - Benjamin Greiner <code@bnavigator.de>
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||||||
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||||||
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- Skip python36 build: NumPy 1.20 in Tumbleweed does not provide
|
||||||
|
python36-numpy anymore (NEP 29).
|
||||||
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||||||
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-------------------------------------------------------------------
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||||||
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Mon Mar 30 07:02:07 UTC 2020 - John Vandenberg <jayvdb@gmail.com>
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||||||
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|
||||||
|
- Require numpy 1.16.0, removing Python 2 support which provides
|
||||||
|
a lower version
|
||||||
|
- Activate test suite
|
||||||
|
|
||||||
|
-------------------------------------------------------------------
|
||||||
|
Sat Mar 14 15:57:22 UTC 2020 - Arun Persaud <arun@gmx.de>
|
||||||
|
|
||||||
|
- specfile:
|
||||||
|
* update copyright year
|
||||||
|
|
||||||
|
- update to version 1.3.2:
|
||||||
|
* Bug Fixes
|
||||||
|
+ Explicitly declare numpy version dependency in pyproject.toml
|
||||||
|
for Python 3.8, fixing certain cases where pip install would
|
||||||
|
fail. Thanks to @goggle, @astrofrog, and @0xb0b for
|
||||||
|
reporting. (:issue:`277`)
|
||||||
|
|
||||||
|
-------------------------------------------------------------------
|
||||||
|
Fri Nov 22 06:15:40 UTC 2019 - Arun Persaud <arun@gmx.de>
|
||||||
|
|
||||||
|
- specfile:
|
||||||
|
* update copyright year
|
||||||
|
|
||||||
|
- update to version 1.3.1:
|
||||||
|
* Bug Fixes
|
||||||
|
+ Fix memory leak in :func:`bottleneck.nanmedian` with the default
|
||||||
|
argument of axis=None. Thanks to @jsmodic for reporting!
|
||||||
|
(:issue:`276`, :issue:`278`)
|
||||||
|
+ Add regression test for memory leak case (:issue:`279`)
|
||||||
|
|
||||||
|
- changes from version 1.3.0:
|
||||||
|
* Project Updates
|
||||||
|
+ Bottleneck has a new maintainer, Christopher Whelan (@qwhelan on
|
||||||
|
GitHub).
|
||||||
|
+ Documentation now hosted at https://bottleneck.readthedocs.io
|
||||||
|
+ 1.3.x will be the last release to support Python 2.7
|
||||||
|
+ Bottleneck now supports and is tested against Python 3.7 and
|
||||||
|
3.8. (:issue:`211`, :issue:`268`)
|
||||||
|
+ The LICENSE file has been restructured to only include the
|
||||||
|
license for the Bottleneck project to aid license audit
|
||||||
|
tools. There has been no change to the licensing of Bottleneck.
|
||||||
|
+ Licenses for other projects incorporated by Bottleneck are now
|
||||||
|
reproduced in full in separate files in the LICENSES/ directory
|
||||||
|
(eg, LICENSES/NUMPY_LICENSE)
|
||||||
|
+ All licenses have been updated. Notably, setuptools is now MIT
|
||||||
|
licensed and no longer under the ambiguous dual PSF/Zope
|
||||||
|
license.
|
||||||
|
+ Bottleneck now uses PEP 518 for specifying build dependencies,
|
||||||
|
with per Python version specifications (:issue:`247`)
|
||||||
|
* Enhancements
|
||||||
|
+ Remove numpydoc package from Bottleneck source distribution
|
||||||
|
+ :func:`bottleneck.slow.reduce.nansum` and
|
||||||
|
:func:`bottleneck.slow.reduce.ss` now longer coerce output to
|
||||||
|
have the same dtype as input
|
||||||
|
+ Test (tox, travis, appveyor) against latest numpy (in conda)
|
||||||
|
+ Performance benchmarking also available via asv
|
||||||
|
+ versioneer now used for versioning (:issue:`213`)
|
||||||
|
+ Test suite now uses pytest as nose is deprecated (:issue:`222`)
|
||||||
|
+ python setup.py build_ext --inplace is now incremental
|
||||||
|
(:issue:`224`)
|
||||||
|
+ python setup.py clean now cleans all artifacts (:issue:`226`)
|
||||||
|
+ Compiler feature support now identified by testing rather than
|
||||||
|
hardcoding (:issue:`227`)
|
||||||
|
+ The BN_OPT_3 macro allows selective use of -O3 at the function
|
||||||
|
level (:issue:`223`)
|
||||||
|
+ Contributors are now automatically cited in the release notes
|
||||||
|
(:issue:`244`)
|
||||||
|
* Performance
|
||||||
|
+ Speed up :func:`bottleneck.reduce.anynan` and
|
||||||
|
:func:`bottleneck.reduce.allnan` by 2x via BN_OPT_3
|
||||||
|
(:issue:`223`)
|
||||||
|
+ All functions covered by asv benchmarks
|
||||||
|
+ :func:`bottleneck.nonreduce.replace` speedup of 4x via more
|
||||||
|
explicit typing (:issue:`239`)
|
||||||
|
+ :func:`bottleneck.reduce.median` up to 2x faster for
|
||||||
|
Fortran-ordered arrays (:issue:`248`)
|
||||||
|
* Bug Fixes
|
||||||
|
+ Documentation fails to build on Python 3 (:issue:`170`)
|
||||||
|
+ :func:`bottleneck.benchmark.bench` crashes on python 3.6.3,
|
||||||
|
numpy 1.13.3 (:issue:`175`)
|
||||||
|
+ :func:`bottleneck.nonreduce_axis.push` raises when n=None is
|
||||||
|
explicitly passed (:issue:`178`)
|
||||||
|
+ :func:`bottleneck.reduce.nansum` wrong output when a =
|
||||||
|
np.ones((2, 2))[..., np.newaxis] same issue of other reduce
|
||||||
|
functions (:issue:`183`)
|
||||||
|
+ Silenced FutureWarning from NumPy in the slow version of move
|
||||||
|
functions (:issue:`194`)
|
||||||
|
+ Installing bottleneck onto a system that does not already have
|
||||||
|
Numpy (:issue:`195`)
|
||||||
|
+ Memory leaked when input was not a NumPy array (:issue:`201`)
|
||||||
|
+ Tautological comparison in :func:`bottleneck.move.move_rank`
|
||||||
|
removed (:issue:`207`, :issue:`212`)
|
||||||
|
* Cleanup
|
||||||
|
+ The ez_setup.py module is no longer packaged (:issue:`211`)
|
||||||
|
+ Building documentation is now self-contained in make doc
|
||||||
|
(:issue:`214`)
|
||||||
|
+ Codebase now flake8 compliant and run on every commit
|
||||||
|
+ Codebase now uses black for autoformatting (:issue:`253`)
|
||||||
|
|
||||||
|
-------------------------------------------------------------------
|
||||||
|
Wed Sep 27 22:20:10 UTC 2017 - arun@gmx.de
|
||||||
|
|
||||||
|
- update to version 1.2.1:
|
||||||
|
* #156 Installing bottleneck when two versions of NumPy are present
|
||||||
|
* #157 Compiling on Ubuntu 14.04 inside a Windows 7 WMware
|
||||||
|
* #159 Occasional segmentation fault in nanargmin, nanargmax,
|
||||||
|
median, and nanmedian when all of the following conditions are
|
||||||
|
met: axis is None, input array is 2d or greater, and input array
|
||||||
|
is not C contiguous.
|
||||||
|
* #163 Reducing np.array([2**31], dtype=np.int64) overflows on
|
||||||
|
Windows
|
||||||
|
|
||||||
|
-------------------------------------------------------------------
|
||||||
|
Wed Apr 19 18:37:17 UTC 2017 - toddrme2178@gmail.com
|
||||||
|
|
||||||
|
- Implement single-spec version.
|
||||||
|
|
||||||
|
-------------------------------------------------------------------
|
||||||
|
Mon Nov 14 14:24:23 UTC 2016 - dmueller@suse.com
|
||||||
|
|
||||||
|
- update to 1.2.0:
|
||||||
|
This release is a complete rewrite of Bottleneck.
|
||||||
|
- Bottleneck is now written in C
|
||||||
|
- Cython is no longer a dependency
|
||||||
|
- Source tarball size reduced by 80%
|
||||||
|
- Build time reduced by 66%
|
||||||
|
- Install size reduced by 45%
|
||||||
|
|
||||||
|
-------------------------------------------------------------------
|
||||||
|
Mon Apr 27 19:23:55 UTC 2015 - benoit.monin@gmx.fr
|
||||||
|
|
||||||
|
- update to version 1.0.0:
|
||||||
|
* "python setup.py build" is 18.7 times faster
|
||||||
|
* Function-call overhead cut in half---a big speed up for small
|
||||||
|
input arrays
|
||||||
|
* Arbitrary ndim input arrays accelerated; previously only 1d,
|
||||||
|
2d, and 3d
|
||||||
|
* bn.nanrankdata is twice as fast for float input arrays
|
||||||
|
* bn.move_max, bn.move_min are faster for int input arrays
|
||||||
|
* No speed penalty for reducing along all axes when input is
|
||||||
|
Fortran ordered
|
||||||
|
* Compiled binaries 14.1 times smaller
|
||||||
|
* Source tarball 4.7 times smaller
|
||||||
|
* 9.8 times less C code
|
||||||
|
* 4.3 times less Cython code
|
||||||
|
* 3.7 times less Python code
|
||||||
|
* Requires numpy 1.9.1
|
||||||
|
* Single API, e.g.: bn.nansum instead of bn.nansum and
|
||||||
|
nansum_2d_float64_axis0
|
||||||
|
* On 64-bit systems bn.nansum(int32) returns int32 instead of
|
||||||
|
int64
|
||||||
|
* bn.nansum now returns 0 for all NaN slices (as does numpy
|
||||||
|
1.9.1)
|
||||||
|
* Reducing over all axes returns, e.g., 6.0; previously
|
||||||
|
np.float64(6.0)
|
||||||
|
* bn.ss() now has default axis=None instead of axis=0
|
||||||
|
* bn.nn() is no longer in bottleneck
|
||||||
|
* Previous releases had moving window function pairs: move_sum,
|
||||||
|
move_nansum
|
||||||
|
* This release only has half of the pairs: move_sum
|
||||||
|
* Instead a new input parameter, min_count, has been added
|
||||||
|
* min_count=None same as old move_sum; min_count=1 same as old
|
||||||
|
move_nansum
|
||||||
|
* If # non-NaN values in window < min_count, then NaN assigned
|
||||||
|
to the window
|
||||||
|
* Exception: move_median does not take min_count as input
|
||||||
|
* Can now install bottleneck with pip even if numpy is not
|
||||||
|
already installed
|
||||||
|
* bn.move_max, bn.move_min now return float32 for float32 input
|
||||||
|
- increase required numpy version to 1.9.1
|
||||||
|
|
||||||
|
-------------------------------------------------------------------
|
||||||
|
Thu May 8 10:58:17 UTC 2014 - toddrme2178@gmail.com
|
||||||
|
|
||||||
|
- Update to version 0.8.0
|
||||||
|
- This version of Bottleneck requires NumPy 1.8
|
||||||
|
- nanargmin and nanargmax behave like the corresponding functions in NumPy 1.8
|
||||||
|
- nanargmax/nanargmin wrong for redundant max/min values in 1d int arrays
|
||||||
|
|
||||||
|
-------------------------------------------------------------------
|
||||||
|
Tue Oct 22 12:07:46 UTC 2013 - toddrme2178@gmail.com
|
||||||
|
|
||||||
|
- Update to version 0.7.0
|
||||||
|
+ bn.rankdata() is twice as fast (with input a = np.random.rand(1000000))
|
||||||
|
+ C files now included in github repo; cython not needed to try latest
|
||||||
|
+ C files are now generated with Cython 0.19.1 instead of 0.16
|
||||||
|
+ Test bottleneck across multiple python/numpy versions using tox
|
||||||
|
+ Source tarball size cut in half
|
||||||
|
|
||||||
|
-------------------------------------------------------------------
|
||||||
|
Fri Jun 22 13:11:43 UTC 2012 - saschpe@suse.de
|
||||||
|
|
||||||
|
- %py_requires is only needed for SLE_11_SP2 (and older), newer Python
|
||||||
|
package releases generate the RPM requires for the Python ABI automatically
|
||||||
|
|
||||||
|
-------------------------------------------------------------------
|
||||||
|
Fri Jun 22 12:25:12 UTC 2012 - saschpe@suse.de
|
||||||
|
|
||||||
|
- Update to version 0.6.0:
|
||||||
|
+ replace(arr, old, new), e.g, replace(arr, np.nan, 0)
|
||||||
|
+ nn(arr, arr0, axis) nearest neighbor and its index of 1d arr0 in 2d arr
|
||||||
|
+ anynan(arr, axis) faster alternative to np.isnan(arr).any(axis)
|
||||||
|
+ allnan(arr, axis) faster alternative to np.isnan(arr).all(axis)
|
||||||
|
+ Python 3.2 support (may work on earlier verions of Python 3)
|
||||||
|
+ C files are now generated with Cython 0.16 instead of 0.14.1
|
||||||
|
+ Upgrade numpydoc from 0.3.1 to 0.4 to support Sphinx 1.0.1
|
||||||
|
+ Support for Python 2.5 dropped
|
||||||
|
+ Default axis for benchmark suite is now axis=1 (was 0)
|
||||||
|
+ #31 Confusing error message in partsort and argpartsort
|
||||||
|
+ #32 Update path in MANIFEST.in
|
||||||
|
+ #35 Wrong output for very large (2**31) input arrays
|
||||||
|
|
||||||
|
-------------------------------------------------------------------
|
||||||
|
Fri Jun 1 09:05:36 UTC 2012 - toddrme2178@gmail.com
|
||||||
|
|
||||||
|
- spec file cleanups
|
||||||
|
- fix license tag
|
||||||
|
|
||||||
|
-------------------------------------------------------------------
|
||||||
|
Mon Feb 27 21:55:40 UTC 2012 - scorot@free.fr
|
||||||
|
|
||||||
|
- version 0.5.0
|
||||||
|
|
||||||
|
-------------------------------------------------------------------
|
||||||
|
Fri Jan 22 00:00:00 UTC 2011 - scorot@gtt.fr
|
||||||
|
|
||||||
|
- Initial release
|
||||||
2
python-Bottleneck.rpmlintrc
Normal file
2
python-Bottleneck.rpmlintrc
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@ -0,0 +1,2 @@
|
|||||||
|
# Required for testing the installed module
|
||||||
|
addFilter("devel-file-in-non-devel-package.*bottleneck/tests/data/template_test")
|
||||||
62
python-Bottleneck.spec
Normal file
62
python-Bottleneck.spec
Normal file
@ -0,0 +1,62 @@
|
|||||||
|
#
|
||||||
|
# spec file for package python-Bottleneck
|
||||||
|
#
|
||||||
|
# Copyright (c) 2023 SUSE LLC
|
||||||
|
#
|
||||||
|
# All modifications and additions to the file contributed by third parties
|
||||||
|
# remain the property of their copyright owners, unless otherwise agreed
|
||||||
|
# upon. The license for this file, and modifications and additions to the
|
||||||
|
# file, is the same license as for the pristine package itself (unless the
|
||||||
|
# license for the pristine package is not an Open Source License, in which
|
||||||
|
# case the license is the MIT License). An "Open Source License" is a
|
||||||
|
# license that conforms to the Open Source Definition (Version 1.9)
|
||||||
|
# published by the Open Source Initiative.
|
||||||
|
|
||||||
|
# Please submit bugfixes or comments via https://bugs.opensuse.org/
|
||||||
|
#
|
||||||
|
|
||||||
|
|
||||||
|
%define skip_python2 1
|
||||||
|
Name: python-Bottleneck
|
||||||
|
Version: 1.3.7
|
||||||
|
Release: 0
|
||||||
|
Summary: A collection of fast NumPy array functions
|
||||||
|
License: BSD-2-Clause AND BSD-3-Clause
|
||||||
|
URL: https://github.com/pydata/bottleneck
|
||||||
|
Source0: https://files.pythonhosted.org/packages/source/B/Bottleneck/Bottleneck-%{version}.tar.gz
|
||||||
|
Source99: python-Bottleneck.rpmlintrc
|
||||||
|
BuildRequires: %{python_module devel}
|
||||||
|
BuildRequires: %{python_module numpy-devel >= 1.16.0}
|
||||||
|
BuildRequires: %{python_module pytest}
|
||||||
|
BuildRequires: %{python_module setuptools}
|
||||||
|
BuildRequires: fdupes
|
||||||
|
BuildRequires: python-rpm-macros
|
||||||
|
Requires: python-numpy >= 1.16.0
|
||||||
|
%python_subpackages
|
||||||
|
|
||||||
|
%description
|
||||||
|
Bottleneck is a collection of fast NumPy array functions written in C.
|
||||||
|
|
||||||
|
%prep
|
||||||
|
%setup -q -n Bottleneck-%{version}
|
||||||
|
|
||||||
|
%build
|
||||||
|
export CFLAGS="%{optflags} -fno-strict-aliasing"
|
||||||
|
%python_build
|
||||||
|
|
||||||
|
%install
|
||||||
|
%python_install
|
||||||
|
%python_expand %fdupes %{buildroot}%{$python_sitearch}
|
||||||
|
|
||||||
|
%check
|
||||||
|
# https://github.com/pydata/bottleneck/issues/423
|
||||||
|
donttest="(move_test and test_move)"
|
||||||
|
%pytest_arch --pyargs bottleneck -k "not ($donttest)"
|
||||||
|
|
||||||
|
%files %{python_files}
|
||||||
|
%license LICENSE
|
||||||
|
%doc README.rst RELEASE.rst
|
||||||
|
%{python_sitearch}/bottleneck/
|
||||||
|
%{python_sitearch}/Bottleneck-%{version}*-info
|
||||||
|
|
||||||
|
%changelog
|
||||||
Loading…
Reference in New Issue
Block a user