ujmp/ujmp.spec

#
# spec file for package ujmp
#
# Copyright (c) 2024 SUSE LLC
#
# All modifications and additions to the file contributed by third parties
# remain the property of their copyright owners, unless otherwise agreed
# upon. The license for this file, and modifications and additions to the
# file, is the same license as for the pristine package itself (unless the
# license for the pristine package is not an Open Source License, in which
# case the license is the MIT License). An "Open Source License" is a
# license that conforms to the Open Source Definition (Version 1.9)
# published by the Open Source Initiative.

# Please submit bugfixes or comments via https://bugs.opensuse.org/
#


Name:           ujmp
Version:        0.3.0
Release:        0
Summary:        Java Library for dense and sparse matrix computations and linear algebra
License:        LGPL-3.0-only
Group:          Development/Libraries/Java
URL:            https://ujmp.org/
Source0:        https://github.com/ujmp/universal-java-matrix-package/archive/refs/tags/%{version}.tar.gz
Patch0:         00-java8.patch
BuildRequires:  fdupes
BuildRequires:  maven-local
BuildRequires:  mvn(colt:colt)
BuildRequires:  mvn(com.itextpdf:itextpdf)
BuildRequires:  mvn(com.jcraft:jsch)
BuildRequires:  mvn(com.jcraft:jzlib)
BuildRequires:  mvn(gov.nist.math:jama)
BuildRequires:  mvn(javax.mail:mail)
BuildRequires:  mvn(javax.vecmath:vecmath)
BuildRequires:  mvn(org.apache.commons:commons-math3)
BuildRequires:  mvn(org.apache.pdfbox:pdfbox)
BuildRequires:  mvn(org.eclipse.jetty:jetty-server)
BuildRequires:  mvn(org.jblas:jblas)
BuildRequires:  mvn(org.jfree:jfreechart)
BuildRequires:  mvn(org.json:json)
BuildRequires:  mvn(org.la4j:la4j)
BuildArch:      noarch

%description
The Universal Java Matrix Package (UJMP) is an open source library for dense
and sparse matrix computations and linear algebra in Java. In addition to the
basic operations like matrix multiplication, matrix inverse or matrix
decomposition, it also supports visualization, JDBC import/export and many
other useful functions such as mean, correlation, standard deviation, mutual
information, or the replacement of missing values.

It’s a swiss army knife for data processing in Java, tailored to machine
learning applications.

In a Nutshell:

• Dense and sparse matrices in multiple dimensions
• Matrix inverse, pseudo inverse, determinant, SVD, LU, QR, Cholesky,
  Eigenvalue decomposition
• Multi-threaded and lighting fast
• Handle terabyte-sized matrices on disk
• Visualize and edit as heatmap, graph, plot
• Treat every type of data as a matrix
• TXT, CSV, PNG, JPG, HTML, XLS, XLSX, PDF, LaTeX, Matlab, MDB
• Free and open source (LGPL)

%package javadoc
Summary:        API documentation for %{name}
Group:          Documentation/HTML

%description javadoc
API documentation for %{name}.

%prep
%setup -q -n universal-java-matrix-package-%{version}
%patch -P 0 -p1

mkdir -p .mvn

sed -i -e 's/import org.apache.pdfbox.util.PDFTextStripper/import org.apache.pdfbox.text.PDFTextStripper/' \
	ujmp-pdfbox/src/main/java/org/ujmp/pdfbox/{ImportMatrixPDF,PdfUtil}.java

sed -i -e 's/setBaseShapesVisible/setDefaultShapesVisible/' \
	ujmp-jfreechart/src/main/java/org/ujmp/jfreechart/MatrixChartPanel.java

%pom_xpath_remove 'pom:addClasspath' %{name}
%pom_xpath_remove 'pom:plugin[pom:artifactId="maven-compiler-plugin"]/pom:configuration' %{name}

%pom_disable_module ../%{name}-ehcache %{name}
%pom_disable_module ../%{name}-ejml %{name}
%pom_disable_module ../%{name}-elasticsearch %{name}
%pom_disable_module ../%{name}-examples %{name}
%pom_disable_module ../%{name}-jung %{name}
%pom_disable_module ../%{name}-hadoop %{name}
%pom_disable_module ../%{name}-jackcess %{name}
%pom_disable_module ../%{name}-jmatio %{name}
%pom_disable_module ../%{name}-jsci %{name}
%pom_disable_module ../%{name}-jscience %{name}
%pom_disable_module ../%{name}-lucene %{name}
%pom_disable_module ../%{name}-mtj %{name}
%pom_disable_module ../%{name}-ojalgo %{name}
%pom_disable_module ../%{name}-parallelcolt %{name}
%pom_disable_module ../%{name}-poi %{name}
%pom_disable_module ../%{name}-complete %{name}

%pom_remove_plugin :maven-source-plugin %{name}

%pom_change_dep :vecmath javax.vecmath:vecmath %{name}-vecmath

%pom_remove_dep org.apache.derby:derby %{name}-jdbc
%pom_remove_dep org.hsqldb:hsqldb %{name}-jdbc
%pom_remove_dep postgresql:postgresql %{name}-jdbc
%pom_remove_dep mysql:mysql-connector-java %{name}-jdbc
%pom_remove_dep com.h2database:h2 %{name}-jdbc
%pom_remove_dep org.xerial:sqlite-jdbc %{name}-jdbc

%build
pushd %{name}
%{mvn_build} -f -- \
%if %{?pkg_vcmp:%pkg_vcmp java-devel >= 9}%{!?pkg_vcmp:0}
	-Dmaven.compiler.release=8 \
%endif
	-Dsource=8
popd

%install
pushd %{name}
%mvn_install
%fdupes %{buildroot}%{_javadocdir}/%{name}
popd

%files -f %{name}/.mfiles
%license LICENSE.md
%doc README.md

%files javadoc -f %{name}/.mfiles-javadoc
%license LICENSE.md

%changelog