Accepting request 870477 from devel:languages:perl:autoupdate

- updated to 1.7.8
   see /usr/share/doc/packages/perl-BioPerl/Changes
  1.7.8     2021-02-02 23:02:18-06:00 America/Chicago
      * Bio::SeqIO::interpro has been moved to a separate repository to
        deal with issues with XML::DOM::XPath bitrot [#347]
      * Pull requests:
        * Adjust Swiss-Prot FT A..B lines [#348] from @smoe
        * Update %FTQUAL_NO_QUOTE: List of qualifiers without quote [#339] from
          @hdevillers

OBS-URL: https://build.opensuse.org/request/show/870477
OBS-URL: https://build.opensuse.org/package/show/devel:languages:perl/perl-BioPerl?expand=0&rev=10
This commit is contained in:
2021-02-11 11:27:21 +00:00
committed by Git OBS Bridge
parent dc8a12333e
commit 264eb6f075
4 changed files with 24 additions and 15 deletions

View File

@@ -1,3 +0,0 @@
version https://git-lfs.github.com/spec/v1
oid sha256:730e2bd38b7550bf6bbd5bca50d019a70cca514559702c1389d770ff69cff1bb
size 7532782

3
BioPerl-1.7.8.tar.gz Normal file
View File

@@ -0,0 +1,3 @@
version https://git-lfs.github.com/spec/v1
oid sha256:c490a3be7715ea6e4305efd9710e5edab82dabc55fd786b6505b550a30d71738
size 7527658

View File

@@ -1,3 +1,17 @@
-------------------------------------------------------------------
Thu Feb 4 03:08:07 UTC 2021 - Tina Müller <timueller+perl@suse.de>
- updated to 1.7.8
see /usr/share/doc/packages/perl-BioPerl/Changes
1.7.8 2021-02-02 23:02:18-06:00 America/Chicago
* Bio::SeqIO::interpro has been moved to a separate repository to
deal with issues with XML::DOM::XPath bitrot [#347]
* Pull requests:
* Adjust Swiss-Prot FT A..B lines [#348] from @smoe
* Update %FTQUAL_NO_QUOTE: List of qualifiers without quote [#339] from
@hdevillers
------------------------------------------------------------------- -------------------------------------------------------------------
Sun Dec 8 03:12:41 UTC 2019 - <timueller+perl@suse.de> Sun Dec 8 03:12:41 UTC 2019 - <timueller+perl@suse.de>

View File

@@ -1,7 +1,7 @@
# #
# spec file for package perl-BioPerl # spec file for package perl-BioPerl
# #
# Copyright (c) 2019 SUSE LINUX GmbH, Nuernberg, Germany. # Copyright (c) 2021 SUSE LLC
# #
# All modifications and additions to the file contributed by third parties # All modifications and additions to the file contributed by third parties
# remain the property of their copyright owners, unless otherwise agreed # remain the property of their copyright owners, unless otherwise agreed
@@ -16,18 +16,16 @@
# #
Name: perl-BioPerl
Version: 1.7.7
Release: 0
%define cpan_name BioPerl %define cpan_name BioPerl
Name: perl-BioPerl
Version: 1.7.8
Release: 0
Summary: Perl modules for biology Summary: Perl modules for biology
License: Artistic-1.0 OR GPL-1.0-or-later License: Artistic-1.0 OR GPL-1.0-or-later
Group: Development/Libraries/Perl URL: https://metacpan.org/release/%{cpan_name}
Url: https://metacpan.org/release/%{cpan_name}
Source0: https://cpan.metacpan.org/authors/id/C/CJ/CJFIELDS/%{cpan_name}-%{version}.tar.gz Source0: https://cpan.metacpan.org/authors/id/C/CJ/CJFIELDS/%{cpan_name}-%{version}.tar.gz
Source1: cpanspec.yml Source1: cpanspec.yml
BuildArch: noarch BuildArch: noarch
BuildRoot: %{_tmppath}/%{name}-%{version}-build
BuildRequires: perl BuildRequires: perl
BuildRequires: perl-macros BuildRequires: perl-macros
BuildRequires: perl(Data::Stag) BuildRequires: perl(Data::Stag)
@@ -48,7 +46,6 @@ BuildRequires: perl(Test::RequiresInternet)
BuildRequires: perl(Test::Weaken) BuildRequires: perl(Test::Weaken)
BuildRequires: perl(URI) BuildRequires: perl(URI)
BuildRequires: perl(XML::DOM) BuildRequires: perl(XML::DOM)
BuildRequires: perl(XML::DOM::XPath)
BuildRequires: perl(XML::LibXML) BuildRequires: perl(XML::LibXML)
BuildRequires: perl(XML::LibXML::Reader) BuildRequires: perl(XML::LibXML::Reader)
BuildRequires: perl(XML::Parser::PerlSAX) BuildRequires: perl(XML::Parser::PerlSAX)
@@ -76,7 +73,6 @@ Requires: perl(Test::Most)
Requires: perl(Test::RequiresInternet) Requires: perl(Test::RequiresInternet)
Requires: perl(URI) Requires: perl(URI)
Requires: perl(XML::DOM) Requires: perl(XML::DOM)
Requires: perl(XML::DOM::XPath)
Requires: perl(XML::LibXML) Requires: perl(XML::LibXML)
Requires: perl(XML::LibXML::Reader) Requires: perl(XML::LibXML::Reader)
Requires: perl(XML::Parser::PerlSAX) Requires: perl(XML::Parser::PerlSAX)
@@ -119,12 +115,12 @@ or related to the core BioPerl effort. Check the site for useful code ideas
and contribute your own if possible. and contribute your own if possible.
%prep %prep
%setup -q -n %{cpan_name}-%{version} %autosetup -n %{cpan_name}-%{version}
find . -type f ! -path "*/t/*" ! -name "*.pl" ! -path "*/bin/*" ! -path "*/script/*" ! -name "configure" -print0 | xargs -0 chmod 644 find . -type f ! -path "*/t/*" ! -name "*.pl" ! -path "*/bin/*" ! -path "*/script/*" ! -name "configure" -print0 | xargs -0 chmod 644
%build %build
perl Makefile.PL INSTALLDIRS=vendor perl Makefile.PL INSTALLDIRS=vendor
make %{?_smp_mflags} %make_build
%check %check
make test make test
@@ -135,7 +131,6 @@ make test
%perl_gen_filelist %perl_gen_filelist
%files -f %{name}.files %files -f %{name}.files
%defattr(-,root,root,755)
%doc AUTHORS Changes examples HACKING.md README.md %doc AUTHORS Changes examples HACKING.md README.md
%license LICENSE %license LICENSE