Accepting request 870477 from devel:languages:perl:autoupdate
- updated to 1.7.8 see /usr/share/doc/packages/perl-BioPerl/Changes 1.7.8 2021-02-02 23:02:18-06:00 America/Chicago * Bio::SeqIO::interpro has been moved to a separate repository to deal with issues with XML::DOM::XPath bitrot [#347] * Pull requests: * Adjust Swiss-Prot FT A..B lines [#348] from @smoe * Update %FTQUAL_NO_QUOTE: List of qualifiers without quote [#339] from @hdevillers OBS-URL: https://build.opensuse.org/request/show/870477 OBS-URL: https://build.opensuse.org/package/show/devel:languages:perl/perl-BioPerl?expand=0&rev=10
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version https://git-lfs.github.com/spec/v1
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oid sha256:730e2bd38b7550bf6bbd5bca50d019a70cca514559702c1389d770ff69cff1bb
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size 7532782
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3
BioPerl-1.7.8.tar.gz
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3
BioPerl-1.7.8.tar.gz
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version https://git-lfs.github.com/spec/v1
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oid sha256:c490a3be7715ea6e4305efd9710e5edab82dabc55fd786b6505b550a30d71738
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size 7527658
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@@ -1,3 +1,17 @@
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-------------------------------------------------------------------
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Thu Feb 4 03:08:07 UTC 2021 - Tina Müller <timueller+perl@suse.de>
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- updated to 1.7.8
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see /usr/share/doc/packages/perl-BioPerl/Changes
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1.7.8 2021-02-02 23:02:18-06:00 America/Chicago
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* Bio::SeqIO::interpro has been moved to a separate repository to
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deal with issues with XML::DOM::XPath bitrot [#347]
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* Pull requests:
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* Adjust Swiss-Prot FT A..B lines [#348] from @smoe
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* Update %FTQUAL_NO_QUOTE: List of qualifiers without quote [#339] from
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@hdevillers
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-------------------------------------------------------------------
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-------------------------------------------------------------------
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Sun Dec 8 03:12:41 UTC 2019 - <timueller+perl@suse.de>
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Sun Dec 8 03:12:41 UTC 2019 - <timueller+perl@suse.de>
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@@ -1,7 +1,7 @@
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#
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#
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# spec file for package perl-BioPerl
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# spec file for package perl-BioPerl
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#
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#
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# Copyright (c) 2019 SUSE LINUX GmbH, Nuernberg, Germany.
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# Copyright (c) 2021 SUSE LLC
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#
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#
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# All modifications and additions to the file contributed by third parties
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# All modifications and additions to the file contributed by third parties
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# remain the property of their copyright owners, unless otherwise agreed
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# remain the property of their copyright owners, unless otherwise agreed
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@@ -16,18 +16,16 @@
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#
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#
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Name: perl-BioPerl
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Version: 1.7.7
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Release: 0
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%define cpan_name BioPerl
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%define cpan_name BioPerl
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Name: perl-BioPerl
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Version: 1.7.8
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Release: 0
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Summary: Perl modules for biology
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Summary: Perl modules for biology
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License: Artistic-1.0 OR GPL-1.0-or-later
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License: Artistic-1.0 OR GPL-1.0-or-later
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Group: Development/Libraries/Perl
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URL: https://metacpan.org/release/%{cpan_name}
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Url: https://metacpan.org/release/%{cpan_name}
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Source0: https://cpan.metacpan.org/authors/id/C/CJ/CJFIELDS/%{cpan_name}-%{version}.tar.gz
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Source0: https://cpan.metacpan.org/authors/id/C/CJ/CJFIELDS/%{cpan_name}-%{version}.tar.gz
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Source1: cpanspec.yml
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Source1: cpanspec.yml
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BuildArch: noarch
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BuildArch: noarch
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BuildRoot: %{_tmppath}/%{name}-%{version}-build
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BuildRequires: perl
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BuildRequires: perl
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BuildRequires: perl-macros
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BuildRequires: perl-macros
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BuildRequires: perl(Data::Stag)
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BuildRequires: perl(Data::Stag)
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@@ -48,7 +46,6 @@ BuildRequires: perl(Test::RequiresInternet)
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BuildRequires: perl(Test::Weaken)
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BuildRequires: perl(Test::Weaken)
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BuildRequires: perl(URI)
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BuildRequires: perl(URI)
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BuildRequires: perl(XML::DOM)
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BuildRequires: perl(XML::DOM)
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BuildRequires: perl(XML::DOM::XPath)
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BuildRequires: perl(XML::LibXML)
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BuildRequires: perl(XML::LibXML)
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BuildRequires: perl(XML::LibXML::Reader)
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BuildRequires: perl(XML::LibXML::Reader)
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BuildRequires: perl(XML::Parser::PerlSAX)
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BuildRequires: perl(XML::Parser::PerlSAX)
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@@ -76,7 +73,6 @@ Requires: perl(Test::Most)
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Requires: perl(Test::RequiresInternet)
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Requires: perl(Test::RequiresInternet)
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Requires: perl(URI)
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Requires: perl(URI)
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Requires: perl(XML::DOM)
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Requires: perl(XML::DOM)
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Requires: perl(XML::DOM::XPath)
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Requires: perl(XML::LibXML)
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Requires: perl(XML::LibXML)
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Requires: perl(XML::LibXML::Reader)
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Requires: perl(XML::LibXML::Reader)
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Requires: perl(XML::Parser::PerlSAX)
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Requires: perl(XML::Parser::PerlSAX)
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@@ -119,12 +115,12 @@ or related to the core BioPerl effort. Check the site for useful code ideas
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and contribute your own if possible.
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and contribute your own if possible.
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%prep
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%prep
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%setup -q -n %{cpan_name}-%{version}
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%autosetup -n %{cpan_name}-%{version}
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find . -type f ! -path "*/t/*" ! -name "*.pl" ! -path "*/bin/*" ! -path "*/script/*" ! -name "configure" -print0 | xargs -0 chmod 644
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find . -type f ! -path "*/t/*" ! -name "*.pl" ! -path "*/bin/*" ! -path "*/script/*" ! -name "configure" -print0 | xargs -0 chmod 644
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%build
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%build
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perl Makefile.PL INSTALLDIRS=vendor
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perl Makefile.PL INSTALLDIRS=vendor
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make %{?_smp_mflags}
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%make_build
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%check
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%check
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make test
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make test
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@@ -135,7 +131,6 @@ make test
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%perl_gen_filelist
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%perl_gen_filelist
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%files -f %{name}.files
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%files -f %{name}.files
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%defattr(-,root,root,755)
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%doc AUTHORS Changes examples HACKING.md README.md
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%doc AUTHORS Changes examples HACKING.md README.md
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%license LICENSE
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%license LICENSE
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