diff --git a/BioPerl-1.7.6.tar.gz b/BioPerl-1.7.6.tar.gz deleted file mode 100644 index ee0227b..0000000 --- a/BioPerl-1.7.6.tar.gz +++ /dev/null @@ -1,3 +0,0 @@ -version https://git-lfs.github.com/spec/v1 -oid sha256:df2a3efc991b9b5d7cc9d038a1452c6dac910c9ad2a0e47e408dd692c111688d -size 7514084 diff --git a/BioPerl-1.7.7.tar.gz b/BioPerl-1.7.7.tar.gz new file mode 100644 index 0000000..2cd75f8 --- /dev/null +++ b/BioPerl-1.7.7.tar.gz @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:730e2bd38b7550bf6bbd5bca50d019a70cca514559702c1389d770ff69cff1bb +size 7532782 diff --git a/perl-BioPerl.changes b/perl-BioPerl.changes index 4ae67d4..04b0609 100644 --- a/perl-BioPerl.changes +++ b/perl-BioPerl.changes @@ -1,3 +1,25 @@ +------------------------------------------------------------------- +Sun Dec 8 03:12:41 UTC 2019 - + +- updated to 1.7.7 + see /usr/share/doc/packages/perl-BioPerl/Changes + + 1.7.7 2019-12-07 13:41:36-06:00 America/Chicago + + * The program bp_chaos_plot has been removed. + + * GD is now no longer a dependency, suggestion or requirement. + + * #321 - GenBank format fix for un-quoted features, text wrapping + + * Bio::DB::Query::WebQuery now includes methods for delay(), delay_policy(), + and a 'private' _sleep() function that mirror those from + Bio::DB::WebDBSeqI, primarily for compliance with potential website + restrictions for the number and frequency of queries (e.g. NCBI eUtils). + + * Fix bug #329, related to Bio::Tree::Statistics::transfer_bootstrap_expectation + in last release. + ------------------------------------------------------------------- Wed Sep 18 09:48:31 UTC 2019 - diff --git a/perl-BioPerl.spec b/perl-BioPerl.spec index ed30352..d9f0db6 100644 --- a/perl-BioPerl.spec +++ b/perl-BioPerl.spec @@ -17,14 +17,14 @@ Name: perl-BioPerl -Version: 1.7.6 +Version: 1.7.7 Release: 0 %define cpan_name BioPerl Summary: Perl modules for biology License: Artistic-1.0 OR GPL-1.0-or-later Group: Development/Libraries/Perl Url: https://metacpan.org/release/%{cpan_name} -Source0: https://cpan.metacpan.org/authors/id/C/CD/CDRAUG/%{cpan_name}-%{version}.tar.gz +Source0: https://cpan.metacpan.org/authors/id/C/CJ/CJFIELDS/%{cpan_name}-%{version}.tar.gz Source1: cpanspec.yml BuildArch: noarch BuildRoot: %{_tmppath}/%{name}-%{version}-build @@ -120,7 +120,7 @@ and contribute your own if possible. %prep %setup -q -n %{cpan_name}-%{version} -find . -type f ! -name \*.pl -print0 | xargs -0 chmod 644 +find . -type f ! -path "*/t/*" ! -name "*.pl" ! -path "*/bin/*" ! -path "*/script/*" ! -name "configure" -print0 | xargs -0 chmod 644 %build perl Makefile.PL INSTALLDIRS=vendor