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boost/mpi_upstream.patch
Adam Majer e1c5a89560 Accepting request 489639 from home:adamm:branches:devel:libraries:c_c++ 
- New upstream version 1.64.0
  + process - new library providing cross platform methods to
    - create child processes
    - setup stream for child processes
    - sync and async communication streams with children
    - sync and async wait
    - process termination
  + geometry library had some breaking changes,
    - ublas_transformer is renamed to matrix_transformer
    - explicit modifier is added to constructors of rtree
      index::dynamic_* parameters
    - strategy::area::huiller replaced by strategy::area::spherical
  + context library updates
    - deprecated API:execution-context
    - fixed bad assembly for fcontext on ppc64/sysv/elf
  + Updated libraries: any, atomic, config, container, context,
    conversion, core, coroutine2, fiber, hash, interprocess,
    intrusive, lexicalcast, math, multi-index containers,
    multiprecision, predef, program options, regex, smart pointers,
    test ,typeindex, typetraits, unordered, variant
  + for details, see 
    http://www.boost.org/users/history/version_1_64_0.html
- Build PyNumpy module
  + add build requires on python-numpy
- test_lowcase.patch: upstreamed
- refreshed patches: boost-strict_aliasing.patch, gcc_path.patch,
  python_mpi.patch
- mpi_upstream.patch: pending upstream fixes to OpenMPI build
- python_library_name.patch: we are building python versions in
  different stagings so drop library renames.

OBS-URL: https://build.opensuse.org/request/show/489639
OBS-URL: https://build.opensuse.org/package/show/devel:libraries:c_c++/boost?expand=0&rev=194
2017-04-21 12:48:16 +00:00

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commit f5bdcc1ebfe954bb64835f2a0efd94471da42207
Author: Jonathan Wakely <github@kayari.org>
Date: Thu Feb 23 02:18:58 2017 +0000
Replace boost::serialization::detail::get_data function. (#39)
commit 947d17157304ceb93926ab961487e9c86fc7c2d2
Author: Jonathan Wakely <github@kayari.org>
Date: Thu Feb 23 02:19:45 2017 +0000
Add header for serialization::make_array (#40)
commit b21d95676028e45a6743be9898306f13fe715282
Author: Andrey Semashev <Lastique@users.noreply.github.com>
Date: Thu Feb 23 05:17:32 2017 +0300
Fix incorrect usage of auto_ptr to free an array (#38)
The `auto_ptr` would use `delete p` to free an array allocated with `operator new[]`, which could result in heap corruption. Replaced it with `scoped_array`.
commit 98c406a77f8506550276a8e81ad6ed0c961fca8f
Author: Alain Miniussi <alain.miniussi@oca.eu>
Date: Thu Feb 23 11:26:49 2017 +0100
documentation typo
Index: boost_1_64_0/boost/mpi/python/serialize.hpp
===================================================================
--- boost_1_64_0.orig/boost/mpi/python/serialize.hpp
+++ boost_1_64_0/boost/mpi/python/serialize.hpp
@@ -26,7 +26,6 @@
#include <boost/python/str.hpp>
#include <boost/python/extract.hpp>
-#include <memory>
#include <map>
#include <boost/function/function3.hpp>
@@ -36,6 +35,9 @@
#include <boost/serialization/split_free.hpp>
#include <boost/serialization/array.hpp>
+#include <boost/serialization/array_wrapper.hpp>
+
+#include <boost/smart_ptr/scoped_array.hpp>
#include <boost/assert.hpp>
@@ -441,7 +443,7 @@ load_impl(Archiver& ar, boost::python::o
int len;
ar >> len;
- std::auto_ptr<char> string(new char[len]);
+ boost::scoped_array<char> string(new char[len]);
ar >> boost::serialization::make_array(string.get(), len);
boost::python::str py_string(string.get(), len);
obj = boost::python::pickle::loads(py_string);
Index: boost_1_64_0/boost/mpi/detail/mpi_datatype_primitive.hpp
===================================================================
--- boost_1_64_0.orig/boost/mpi/detail/mpi_datatype_primitive.hpp
+++ boost_1_64_0/boost/mpi/detail/mpi_datatype_primitive.hpp
@@ -25,7 +25,6 @@ namespace std{
#include <boost/assert.hpp>
#include <boost/mpl/placeholders.hpp>
#include <boost/serialization/array.hpp>
-#include <boost/serialization/detail/get_data.hpp>
#include <stdexcept>
#include <iostream>
#include <vector>
@@ -80,18 +79,18 @@ public:
BOOST_MPI_CHECK_RESULT(MPI_Type_create_struct,
(
addresses.size(),
- boost::serialization::detail::get_data(lengths),
- boost::serialization::detail::get_data(addresses),
- boost::serialization::detail::get_data(types),
+ get_data(lengths),
+ get_data(addresses),
+ get_data(types),
&datatype_
));
#else
BOOST_MPI_CHECK_RESULT(MPI_Type_struct,
(
addresses.size(),
- boost::serialization::detail::get_data(lengths),
- boost::serialization::detail::get_data(addresses),
- boost::serialization::detail::get_data(types),
+ get_data(lengths),
+ get_data(addresses),
+ get_data(types),
&datatype_
));
#endif
@@ -129,6 +128,12 @@ private:
lengths.push_back(l);
}
+ template <class T>
+ static T* get_data(std::vector<T>& v)
+ {
+ return v.empty() ? 0 : &(v[0]);
+ }
+
std::vector<MPI_Aint> addresses;
std::vector<MPI_Datatype> types;
std::vector<int> lengths;
Index: boost_1_64_0/boost/mpi/detail/packed_iprimitive.hpp
===================================================================
--- boost_1_64_0.orig/boost/mpi/detail/packed_iprimitive.hpp
+++ boost_1_64_0/boost/mpi/detail/packed_iprimitive.hpp
@@ -16,7 +16,6 @@
#include <boost/mpi/exception.hpp>
#include <boost/assert.hpp>
#include <boost/serialization/array.hpp>
-#include <boost/serialization/detail/get_data.hpp>
#include <vector>
#include <boost/mpi/allocator.hpp>
@@ -104,7 +103,12 @@ private:
void load_impl(void * p, MPI_Datatype t, int l)
{
BOOST_MPI_CHECK_RESULT(MPI_Unpack,
- (const_cast<char*>(boost::serialization::detail::get_data(buffer_)), buffer_.size(), &position, p, l, t, comm));
+ (get_data(buffer_), buffer_.size(), &position, p, l, t, comm));
+ }
+
+ static buffer_type::value_type* get_data(buffer_type& b)
+ {
+ return b.empty() ? 0 : &(b[0]);
}
buffer_type & buffer_;
Index: boost_1_64_0/boost/mpi/detail/packed_oprimitive.hpp
===================================================================
--- boost_1_64_0.orig/boost/mpi/detail/packed_oprimitive.hpp
+++ boost_1_64_0/boost/mpi/detail/packed_oprimitive.hpp
@@ -15,7 +15,6 @@
#include <boost/mpi/datatype.hpp>
#include <boost/mpi/exception.hpp>
-#include <boost/serialization/detail/get_data.hpp>
#include <boost/serialization/array.hpp>
#include <boost/assert.hpp>
#include <vector>
@@ -98,13 +97,18 @@ private:
// pack the data into the buffer
BOOST_MPI_CHECK_RESULT(MPI_Pack,
- (const_cast<void*>(p), l, t, boost::serialization::detail::get_data(buffer_), buffer_.size(), &position, comm));
+ (const_cast<void*>(p), l, t, get_data(buffer_), buffer_.size(), &position, comm));
// reduce the buffer size if needed
BOOST_ASSERT(std::size_t(position) <= buffer_.size());
if (std::size_t(position) < buffer_.size())
buffer_.resize(position);
}
+ static buffer_type::value_type* get_data(buffer_type& b)
+ {
+ return b.empty() ? 0 : &(b[0]);
+ }
+
buffer_type& buffer_;
mutable std::size_t size_;
MPI_Comm comm;
Index: boost_1_64_0/boost/mpi/communicator.hpp
===================================================================
--- boost_1_64_0.orig/boost/mpi/communicator.hpp
+++ boost_1_64_0/boost/mpi/communicator.hpp
@@ -850,7 +850,7 @@ class BOOST_MPI_DECL communicator
optional<graph_communicator> as_graph_communicator() const;
/**
- * Determines whether this communicator has a Cartesian topology.
+ * Determines whether this communicator has a Graph topology.
*/
bool has_cartesian_topology() const;
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