Atri Bhattacharya
83ead6ac22
Update to 1.3.1 OBS-URL: https://build.opensuse.org/request/show/977937 OBS-URL: https://build.opensuse.org/package/show/science/bowtie?expand=0&rev=10
56 lines
1.8 KiB
RPMSpec
56 lines
1.8 KiB
RPMSpec
#
|
|
# spec file for package bowtie
|
|
#
|
|
# Copyright (c) 2022 SUSE LLC
|
|
#
|
|
# All modifications and additions to the file contributed by third parties
|
|
# remain the property of their copyright owners, unless otherwise agreed
|
|
# upon. The license for this file, and modifications and additions to the
|
|
# file, is the same license as for the pristine package itself (unless the
|
|
# license for the pristine package is not an Open Source License, in which
|
|
# case the license is the MIT License). An "Open Source License" is a
|
|
# license that conforms to the Open Source Definition (Version 1.9)
|
|
# published by the Open Source Initiative.
|
|
|
|
# Please submit bugfixes or comments via https://bugs.opensuse.org/
|
|
#
|
|
|
|
|
|
Name: bowtie
|
|
Version: 1.3.1
|
|
Release: 0
|
|
Summary: Fast and memory-efficient short read aligner
|
|
License: Artistic-1.0
|
|
Group: Productivity/Scientific/Other
|
|
URL: http://bowtie-bio.sourceforge.net/index.shtml
|
|
Source: https://github.com/BenLangmead/%{name}/archive/v%{version}.tar.gz#/%{name}-%{version}.tar.gz
|
|
BuildRequires: gcc-c++
|
|
BuildRequires: pkgconfig
|
|
BuildRequires: tbb-devel
|
|
BuildRequires: pkgconfig(zlib)
|
|
ExclusiveArch: x86_64 aarch64
|
|
|
|
%description
|
|
Bowtie is an ultrafast, memory-efficient short read aligner. It aligns short
|
|
DNA sequences (reads) to the human genome at a rate of over 25 million 35-bp
|
|
reads per hour. Bowtie indexes the genome with a Burrows-Wheeler index to keep
|
|
its memory footprint small: typically about 2.2 GB for the human genome
|
|
(2.9 GB for paired-end).
|
|
|
|
%prep
|
|
%autosetup -p1
|
|
|
|
%build
|
|
%make_build
|
|
|
|
%install
|
|
%make_install prefix=%{_prefix}
|
|
sed -i '1{s|^#!.*env python|#!%{_bindir}/python|}' %{buildroot}%{_bindir}/bowtie*
|
|
|
|
%files
|
|
%doc README MANUAL AUTHORS NEWS TUTORIAL VERSION
|
|
%license LICENSE
|
|
%{_bindir}/*
|
|
|
|
%changelog
|