Atri Bhattacharya
8f96ba228b
Add diy-glibc2.34-drop-SIGSTKSZ.patch to compile against glibc >= 2.34 which no longer defines SIGSTKSZ as constant (see, for instance, gh#catchorg/Catch2#/2178). OBS-URL: https://build.opensuse.org/request/show/926483 OBS-URL: https://build.opensuse.org/package/show/science/diy?expand=0&rev=7
141 lines
4.5 KiB
RPMSpec
141 lines
4.5 KiB
RPMSpec
#
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# spec file for package diy
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#
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# Copyright (c) 2021 SUSE LLC
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#
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# All modifications and additions to the file contributed by third parties
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# remain the property of their copyright owners, unless otherwise agreed
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# upon. The license for this file, and modifications and additions to the
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# file, is the same license as for the pristine package itself (unless the
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# license for the pristine package is not an Open Source License, in which
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# case the license is the MIT License). An "Open Source License" is a
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# license that conforms to the Open Source Definition (Version 1.9)
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# published by the Open Source Initiative.
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# Please submit bugfixes or comments via https://bugs.opensuse.org/
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#
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# SECTION Multibuild Definitions
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%global flavor @BUILD_FLAVOR@%{nil}
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%define pname diy
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%if "%{flavor}" == ""
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%undefine mpi_flavor
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%endif
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%if "%{flavor}" == "mpich"
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%global mpi_flavor mpich
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%global mpi_min_ver 3.3.0
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%endif
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%{?mpi_flavor:%{bcond_without mpi}}%{!?mpi_flavor:%{bcond_with mpi}}
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%{?with_mpi:%{!?mpi_flavor:error "No MPI family specified!"}}
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%if %{with mpi}
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%define my_prefix %{_libdir}/mpi/gcc/%{mpi_flavor}%{?mpi_ext}
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%define my_bindir %{my_prefix}/bin
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%define my_libdir %{my_prefix}/%{_lib}
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%define my_incdir %{my_prefix}/include
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%define my_suffix -%{mpi_flavor}%{?mpi_ext}
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%else
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%define my_prefix %{_prefix}
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%define my_bindir %{_bindir}
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%define my_libdir %{_libdir}
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%define my_incdir %{_includedir}
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%endif
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# /SECTION
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%define package_name %{pname}%{?my_suffix}
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Name: %{package_name}
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Version: 3.5.0
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Release: 0
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Summary: A block-parallel library
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License: BSD-3-Clause
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URL: https://github.com/diatomic/diy
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Source: https://github.com/diatomic/diy/archive/%{version}.tar.gz#/%{pname}-%{version}.tar.gz
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# PATCH-FIX-UPSTREAM diy-disable-memory-heavy-tests.patch badshah400@gmail.com -- Disable a few tests requiring more than 10 GB memory
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Patch0: diy-disable-memory-heavy-tests.patch
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# PATCH-FIX-UPSTREAM diy-include-stdexcept.patch badshah400@gmail.com -- Include a missing header flagged by GCC 10
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Patch1: diy-include-stdexcept.patch
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# PATCH-FIX-UPSTREAM diy-glibc2.34-drop-SIGSTKSZ.patch gh#catchorg/Catch2#2178 badshah400@gmail.com -- Replace SIGSTKSZ by hard-coded 32kb to allow compilation against glibc 2.34 where SIGSTKSZ is no longer a constant
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Patch2: diy-glibc2.34-drop-SIGSTKSZ.patch
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BuildRequires: cmake >= 3.2
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BuildRequires: gcc-c++
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%if %{with mpi}
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BuildRequires: %{mpi_flavor}%{?mpi_ext}-devel
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%endif
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ExclusiveArch: x86_64
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%description
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Diy is a block-parallel library for implementing scalable algorithms
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that can execute both in-core and out-of-core. The same program can be
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executed with one or more threads per MPI process, seamlessly
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combining distributed-memory message passing with shared-memory thread
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parallelism. The abstraction enabling these capabilities is block
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parallelism; blocks and their message queues are mapped onto
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processing elements (MPI processes or threads) and are migrated
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between memory and storage by the diy runtime. Complex communication
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patterns, including neighbor exchange, merge reduction, swap
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reduction, and all-to-all exchange, are possible in- and out-of-core
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in diy.
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%package devel
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Summary: A block-parallel library
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%description devel
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Diy is a block-parallel library for implementing scalable
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algorithms that can execute both in-core and out-of-core. The same
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program can be executed with one or more threads per MPI process,
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seamlessly combining distributed-memory message passing with
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shared-memory thread parallelism. The abstraction enabling these
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capabilities is block parallelism; blocks and their message queues
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are mapped onto processing elements (MPI processes or threads) and
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are migrated between memory and storage by the diy runtime. Complex
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communication patterns, including neighbor exchange, merge reduction,
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swap reduction, and all-to-all exchange, are possible in- and
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out-of-core in diy.
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This package provides the header files for development with diy.
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%prep
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%autosetup -p1 -n %{pname}-%{version}
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%build
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%if %{with mpi}
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source %{my_bindir}/mpivars.sh
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export CC=mpicc
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export CXX=mpicxx
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%else
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export CC=gcc
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export CXX=g++
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%endif
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export CFLAGS="%{optflags}"
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export CXXFLAGS="%{optflags}"
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%cmake \
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-DCMAKE_INSTALL_PREFIX:PATH=%{my_prefix} \
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-Dmpi:BOOL=%{?with_mpi:ON}%{!?with_mpi=OFF} \
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-Dwrapped_mpi:BOOL=%{?with_mpi:ON}%{!?with_mpi=OFF}
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%cmake_build
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%install
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%cmake_install
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%check
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%if %{with mpi}
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source %{my_bindir}/mpivars.sh
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%endif
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%ctest
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%files devel
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%doc README.md
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%license LICENSE.txt LEGAL.txt
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%{my_incdir}/*
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%changelog
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