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Accepting request 725246 from science

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- update to gsl 2.6:
  * add BLAS calls for multiple functions
  * Algorithm and implementation updates
  * deprecation of multiple functions
  * removal of multiple previously deprecated functions
  * add binary search tree module (gsl_bst); based on GNU libavl
  * remove -u flag to gsl-histogram
  * updated spmatrix module
  * add routines for banded Cholesky decomposition
- drop upstreamed patches:
  * gsl-1.6-initvars.diff 
  * gsl-wrap.diff
  * gsl-fsf_address.patch

OBS-URL: https://build.opensuse.org/request/show/725246
OBS-URL: https://build.opensuse.org/package/show/openSUSE:Factory/gsl?expand=0&rev=43
This commit is contained in:
Dominique Leuenberger 2019-08-27 08:12:48 +00:00 committed by Git OBS Bridge
commit b3d2cf5976
10 changed files with 25 additions and 99 deletions
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15
gsl-1.6-initvars.diff
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@ -1,15 +0,0 @@
Index: gsl-1.8/specfunc/coulomb.c
===================================================================
--- gsl-1.8.orig/specfunc/coulomb.c
+++ gsl-1.8/specfunc/coulomb.c
@@ -941,9 +941,9 @@ gsl_sf_coulomb_wave_FG_e(const double et
const int N = (int)(lam_F + 0.5);
const int span = GSL_MAX(k_lam_G, N);
const double lam_min = lam_F - N; /* -1/2 <= lam_min < 1/2 */
double F_lam_F, Fp_lam_F;
- double G_lam_G, Gp_lam_G;
+ double G_lam_G = 0.0, Gp_lam_G = 0.0;
double F_lam_F_err, Fp_lam_F_err;
double Fp_over_F_lam_F;
double F_sign_lam_F;
double F_lam_min_unnorm, Fp_lam_min_unnorm;

3
gsl-2.5.tar.gz
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@ -1,3 +0,0 @@
version https://git-lfs.github.com/spec/v1
oid sha256:0460ad7c2542caaddc6729762952d345374784100223995eb14d614861f2258d
size 7303881

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gsl-2.5.tar.gz.sig
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3
gsl-2.6.tar.gz Normal file
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@ -0,0 +1,3 @@
version https://git-lfs.github.com/spec/v1
oid sha256:b782339fc7a38fe17689cb39966c4d821236c28018b6593ddb6fd59ee40786a8
size 7398548

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gsl-2.6.tar.gz.sig Normal file
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28
gsl-fsf_address.patch
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@ -1,28 +0,0 @@
Index: cdf/gsl_cdf.h
===================================================================
--- cdf/gsl_cdf.h.orig 2010-12-26 18:57:08.000000000 +0100
+++ cdf/gsl_cdf.h 2012-03-28 18:06:52.241930192 +0200
@@ -13,8 +13,7 @@
* General Public License for more details.
*
* You should have received a copy of the GNU General Public License
- * along with this program; if not, write to the Free Software Foundation,
- * Inc., 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301, USA.
+ * along with this program; if not, see http://www.gnu.org/licenses/
*/
/* Author: J. Stover */
Index: specfunc/gsl_sf_mathieu.h
===================================================================
--- specfunc/gsl_sf_mathieu.h.orig 2010-12-26 18:57:08.000000000 +0100
+++ specfunc/gsl_sf_mathieu.h 2012-03-28 18:07:46.281645515 +0200
@@ -13,8 +13,7 @@
* General Public License for more details.
*
* You should have received a copy of the GNU General Public License
- * along with this program; if not, write to the Free Software
- * Foundation, Inc., 675 Mass Ave, Cambridge, MA 02139, USA.
+ * along with this program; if not, see see http://www.gnu.org/licenses/
*/
/* Author: L. Johnson */

44
gsl-wrap.diff
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@ -1,44 +0,0 @@
Index: gsl-1.11/sort/Makefile.am
===================================================================
--- gsl-1.11.orig/sort/Makefile.am
+++ gsl-1.11/sort/Makefile.am
@@ -10,7 +10,9 @@ noinst_HEADERS = sortvec_source.c sortve
TESTS = $(check_PROGRAMS)
check_PROGRAMS = test
+#test_source.lo_CFLAGS = -fwrapv
+
test_SOURCES = test.c
test_LDADD = libgslsort.la ../permutation/libgslpermutation.la ../vector/libgslvector.la ../block/libgslblock.la ../ieee-utils/libgslieeeutils.la ../err/libgslerr.la ../test/libgsltest.la ../sys/libgslsys.la
Index: gsl-1.11/sort/test_source.c
===================================================================
--- gsl-1.11.orig/sort/test_source.c
+++ gsl-1.11/sort/test_source.c
@@ -158,19 +158,19 @@ TYPE (test_sort_vector) (size_t N, size_
void
FUNCTION (my, initialize) (TYPE (gsl_vector) * v)
{
size_t i;
- ATOMIC k = 0;
- volatile ATOMIC kk;
+ ATOMIC maxk = 0;
/* Must be sorted initially */
for (i = 0; i < v->size; i++)
{
- kk = k;
- k++;
- /* Prevent overflow */
- if (k < kk) k = kk;
+ ATOMIC k = i;
+ if (k < maxk) /* prevent wrap around */
+ k = maxk;
+ else
+ maxk = k;
FUNCTION (gsl_vector, set) (v, i, k);
}
}

17
gsl.changes
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@ -1,3 +1,20 @@
-------------------------------------------------------------------
Wed Aug 21 18:55:31 UTC 2019 - Andreas Stieger <andreas.stieger@gmx.de>
- update to gsl 2.6:
* add BLAS calls for multiple functions
* Algorithm and implementation updates
* deprecation of multiple functions
* removal of multiple previously deprecated functions
* add binary search tree module (gsl_bst); based on GNU libavl
* remove -u flag to gsl-histogram
* updated spmatrix module
* add routines for banded Cholesky decomposition
- drop upstreamed patches:
* gsl-1.6-initvars.diff
* gsl-wrap.diff
* gsl-fsf_address.patch
-------------------------------------------------------------------
Thu Feb 14 09:00:22 UTC 2019 - adam.majer@suse.de

2
gsl.keyring
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@ -1,3 +1,4 @@
GPG keys of Patrick Alken <psa>
-----BEGIN PGP PUBLIC KEY BLOCK-----
Version: GnuPG v2.0.14 (GNU/Linux)
@ -29,6 +30,7 @@ CpZ0eHbJMNtbHTI+9VNzgvYcUWqzDPFNOyQ1275g+cMYTCaLE2W/MHLNzUjZe5hf
=sAxL
-----END PGP PUBLIC KEY BLOCK-----
GPG keys of Mark Galassi <markgalassi>
-----BEGIN PGP PUBLIC KEY BLOCK-----
Version: GnuPG v1.2.5 (GNU/Linux)

12
gsl.spec
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@ -19,9 +19,9 @@
%global flavor @BUILD_FLAVOR@%{nil}
%define pname gsl
%define vers 2.5
%define _vers 2_5
%define lgsl_so_v 23
%define vers 2.6
%define _vers 2_6
%define lgsl_so_v 25
%define lgslcblas_so_v 0
%if "%{flavor}" == ""
@ -92,11 +92,8 @@ URL: https://www.gnu.org/software/%{pname}/
Source0: https://ftp.gnu.org/pub/gnu/%{pname}/%{pname}-%{version}.tar.gz
Source1: https://ftp.gnu.org/pub/gnu/%{pname}/%{pname}-%{version}.tar.gz.sig
Source2: https://savannah.gnu.org/project/memberlist-gpgkeys.php?group=gsl&download=1#/%{pname}.keyring
Patch0: gsl-1.6-initvars.diff
Patch5: gsl-wrap.diff
Patch6: gsl-qawc-test-x86-precision.diff
Patch7: gsl-disable-fma.patch
Patch8: gsl-fsf_address.patch
BuildRequires: autoconf
BuildRequires: automake
BuildRequires: libtool
@ -229,11 +226,8 @@ library packages.
%prep
%setup -q -n %{pname}-%{version}
%patch0 -p1
%patch5 -p1
%patch6
%patch7 -p1
%patch8
%build