2012-12-23 17:36:56 +00:00
|
|
|
#
|
2012-12-23 18:44:49 +00:00
|
|
|
# spec file for package imagej
|
2012-12-23 17:36:56 +00:00
|
|
|
#
|
2017-10-02 12:29:57 +00:00
|
|
|
# Copyright (c) 2017 SUSE LINUX GmbH, Nuernberg, Germany.
|
2012-12-23 17:36:56 +00:00
|
|
|
#
|
|
|
|
# All modifications and additions to the file contributed by third parties
|
|
|
|
# remain the property of their copyright owners, unless otherwise agreed
|
|
|
|
# upon. The license for this file, and modifications and additions to the
|
|
|
|
# file, is the same license as for the pristine package itself (unless the
|
|
|
|
# license for the pristine package is not an Open Source License, in which
|
|
|
|
# case the license is the MIT License). An "Open Source License" is a
|
|
|
|
# license that conforms to the Open Source Definition (Version 1.9)
|
|
|
|
# published by the Open Source Initiative.
|
|
|
|
|
|
|
|
# Please submit bugfixes or comments via http://bugs.opensuse.org/
|
2016-03-08 17:48:54 +00:00
|
|
|
#
|
|
|
|
|
2012-12-23 17:36:56 +00:00
|
|
|
|
Accepting request 852707 from home:andythe_great:branches:science
- Update to version 1.53f.
* Added a popup menu to the magnifying glass tool icon.
* Added a popup menu triggered on a right click or long press
inside a selection.
* Updated the built in toolbar "Dev" menu.
* The text in a text selection can be edited in the
Edit>Selection>Properties dialog.
* The File>Import>Image Sequence dialog is used when drag and
dropping a folder on the "ImageJ" window.
* Undo works with overlays when translating and rotating images,
and the "Overlay only" checkbox is only shown in the Translate
dialog when there is an overlay.
* Added the Edit>Options>Fresh Start command, which closes all
images, empties the ROI Manager, clears the Results table and
enables the "Black background" option.
* The Reslice command is faster on Windows when re-slicing from
"Left" or "Right" and it uses an ordinary progress bar when
run from a macro.
* Added an "Open as separate images" checkbox to the
File>Import>Image Sequence dialog.
* Added "Foreground..." and "Background..." entries to the color
picker tool popup menu.
* Added the Image.width, Image.height, Image.copy and
Image.paste(x,y) macro functions (example).
* Added the Array.filter(arr,str), Math.toRadians(degrees) and
Math.toDegrees(radians) functions.
* Added the ResultsTable.addRow() method. For an example, run
Help>Examples>JavaScript>Sine/Cosine Table.
* Fixed a bug that caused the RoiManager.getSelectedIndexes()
method to sometimes not work as expected.
* Fixed a bug that slowed saving of virtual stacks in TIFF
format.
* Fixed a bug that caused the dynamic "Value" and "Count" values
in HIstogram windows to sometimes not be displayed correctly.
* Fixed a bug that caused the Ctrl+F (Edit>Fill) keyboard
shortcut on Windows, when used on a stack, to not display the
"Proces Stack?" dialog.
* Fixed a 1.53e regression that caused the imageCaculator() macro
function do somethimes not work as expected.
* Fixed a 1.52 regression that caused the Analyze Skeleton plugin
to output incorrect Results tables.
* Fixed a regression that caused the Edit>Copy to Image Info
command in the text editor to fail.
* Fixed a 1.53c regression in the AVI Reader that caused it to
throw a null pointer exception.
* Fixed a 1.52 regression that caused the IJ.getImage() method to
sometimes display model error dialogs.
* Many bugfixes and usability improvements
OBS-URL: https://build.opensuse.org/request/show/852707
OBS-URL: https://build.opensuse.org/package/show/science/imagej?expand=0&rev=15
2020-12-08 16:12:15 +00:00
|
|
|
%define SrcVersion 153f
|
2012-12-23 17:36:56 +00:00
|
|
|
|
|
|
|
Name: imagej
|
Accepting request 852707 from home:andythe_great:branches:science
- Update to version 1.53f.
* Added a popup menu to the magnifying glass tool icon.
* Added a popup menu triggered on a right click or long press
inside a selection.
* Updated the built in toolbar "Dev" menu.
* The text in a text selection can be edited in the
Edit>Selection>Properties dialog.
* The File>Import>Image Sequence dialog is used when drag and
dropping a folder on the "ImageJ" window.
* Undo works with overlays when translating and rotating images,
and the "Overlay only" checkbox is only shown in the Translate
dialog when there is an overlay.
* Added the Edit>Options>Fresh Start command, which closes all
images, empties the ROI Manager, clears the Results table and
enables the "Black background" option.
* The Reslice command is faster on Windows when re-slicing from
"Left" or "Right" and it uses an ordinary progress bar when
run from a macro.
* Added an "Open as separate images" checkbox to the
File>Import>Image Sequence dialog.
* Added "Foreground..." and "Background..." entries to the color
picker tool popup menu.
* Added the Image.width, Image.height, Image.copy and
Image.paste(x,y) macro functions (example).
* Added the Array.filter(arr,str), Math.toRadians(degrees) and
Math.toDegrees(radians) functions.
* Added the ResultsTable.addRow() method. For an example, run
Help>Examples>JavaScript>Sine/Cosine Table.
* Fixed a bug that caused the RoiManager.getSelectedIndexes()
method to sometimes not work as expected.
* Fixed a bug that slowed saving of virtual stacks in TIFF
format.
* Fixed a bug that caused the dynamic "Value" and "Count" values
in HIstogram windows to sometimes not be displayed correctly.
* Fixed a bug that caused the Ctrl+F (Edit>Fill) keyboard
shortcut on Windows, when used on a stack, to not display the
"Proces Stack?" dialog.
* Fixed a 1.53e regression that caused the imageCaculator() macro
function do somethimes not work as expected.
* Fixed a 1.52 regression that caused the Analyze Skeleton plugin
to output incorrect Results tables.
* Fixed a regression that caused the Edit>Copy to Image Info
command in the text editor to fail.
* Fixed a 1.53c regression in the AVI Reader that caused it to
throw a null pointer exception.
* Fixed a 1.52 regression that caused the IJ.getImage() method to
sometimes display model error dialogs.
* Many bugfixes and usability improvements
OBS-URL: https://build.opensuse.org/request/show/852707
OBS-URL: https://build.opensuse.org/package/show/science/imagej?expand=0&rev=15
2020-12-08 16:12:15 +00:00
|
|
|
Version: 1.53f
|
2012-12-23 17:36:56 +00:00
|
|
|
Release: 0
|
2018-02-21 11:56:01 +00:00
|
|
|
Summary: A Java image processing program
|
2016-03-08 17:48:54 +00:00
|
|
|
License: SUSE-Public-Domain
|
2012-12-23 17:36:56 +00:00
|
|
|
Group: Productivity/Graphics/Convertors
|
2016-03-08 17:48:54 +00:00
|
|
|
Url: http://rsbweb.nih.gov/ij/
|
2012-12-23 17:36:56 +00:00
|
|
|
Source: http://rsbweb.nih.gov/ij/download/src/ij%{SrcVersion}-src.zip
|
|
|
|
Source1: %{name}.in
|
|
|
|
Source2: %{name}.desktop
|
2016-03-08 17:48:54 +00:00
|
|
|
BuildRequires: ImageMagick
|
2012-12-23 17:36:56 +00:00
|
|
|
BuildRequires: ant
|
|
|
|
BuildRequires: java-devel
|
|
|
|
BuildRequires: unzip
|
|
|
|
BuildRequires: update-desktop-files
|
|
|
|
Requires: java >= 1.6.0
|
|
|
|
BuildRoot: %{_tmppath}/%{name}-%{version}-build
|
|
|
|
BuildArch: noarch
|
|
|
|
|
|
|
|
%description
|
2018-02-21 11:56:01 +00:00
|
|
|
ImageJ is a multithreaded image processing program inspired by NIH
|
|
|
|
Image for the Macintosh, running either as an applet or as a
|
|
|
|
standalone program.
|
|
|
|
|
|
|
|
It can read many image formats including TIFF, GIF, JPEG, BMP, DICOM,
|
|
|
|
FITS and "raw", and display, edit, anazlye, process and print
|
|
|
|
8/16/32-bit images. It supports "stacks", a series of images that
|
|
|
|
share a single window. It can calculate area and pixel value
|
|
|
|
statistics of user-defined selections, measure distances and angles,
|
|
|
|
create density histograms and line profile plots, supports standard
|
|
|
|
image processing functions such as contrast manipulation, sharpening,
|
|
|
|
smoothing, edge detection and median filtering. It does geometric
|
|
|
|
transformations such as scaling, rotation and flips. Zoom in/out up
|
|
|
|
to 32:1/1:32. Spatial calibration is available to provide real-world
|
|
|
|
dimensional measurements in units such as millimeters. Density or
|
|
|
|
gray scale calibration is also available.
|
|
|
|
|
|
|
|
ImageJ can be extended via Java plugins, and has a built-in editor and
|
|
|
|
compiler.
|
2012-12-23 17:36:56 +00:00
|
|
|
|
|
|
|
%prep
|
|
|
|
%setup -n source
|
|
|
|
|
|
|
|
%build
|
|
|
|
%ant build
|
|
|
|
|
|
|
|
%install
|
|
|
|
install -d -m 755 %{buildroot}%{_datadir}/%{name}
|
|
|
|
install -m 755 ij.jar %{buildroot}%{_datadir}/%{name}/%{name}.jar
|
|
|
|
|
|
|
|
# startscript
|
|
|
|
cat > %{name} << 'EOF'
|
|
|
|
#!/bin/sh
|
|
|
|
#
|
|
|
|
# imagej startscript
|
|
|
|
#
|
|
|
|
# Source functions library
|
|
|
|
echo Starting %{name} version %{version} ...
|
|
|
|
echo with options : ${@}
|
|
|
|
|
|
|
|
java -jar %{_datadir}/%{name}/imagej.jar ${@}
|
|
|
|
|
|
|
|
EOF
|
|
|
|
|
|
|
|
install -d -m 755 %{buildroot}%{_bindir}
|
|
|
|
install -m 755 %{name} %{buildroot}%{_bindir}/
|
|
|
|
|
|
|
|
# Icon
|
2016-03-08 17:48:54 +00:00
|
|
|
convert -strip build/microscope.gif build/%{name}.png
|
2012-12-23 18:44:49 +00:00
|
|
|
install -Dm 644 build/%{name}.png %{buildroot}%{_datadir}/pixmaps/%{name}.png
|
2012-12-23 17:36:56 +00:00
|
|
|
|
|
|
|
# Desktop menu entry
|
|
|
|
install -d -m 755 %{buildroot}%{_datadir}/applications
|
|
|
|
install -m 644 %{SOURCE2} %{buildroot}%{_datadir}/applications/%{name}.desktop
|
|
|
|
%suse_update_desktop_file %{name}
|
|
|
|
|
|
|
|
%files
|
|
|
|
%defattr(-,root,root)
|
2012-12-23 18:44:49 +00:00
|
|
|
%doc release-notes.html
|
2012-12-23 17:36:56 +00:00
|
|
|
%{_bindir}/*
|
|
|
|
%{_datadir}/%{name}
|
|
|
|
%{_datadir}/%{name}/*.jar
|
|
|
|
#%{_datadir}/%{name}/lib/*
|
|
|
|
%{_datadir}/applications/%{name}.desktop
|
|
|
|
%{_datadir}/pixmaps/%{name}.png
|
|
|
|
|
|
|
|
%changelog
|