Accepting request 1089214 from science
OBS-URL: https://build.opensuse.org/request/show/1089214 OBS-URL: https://build.opensuse.org/package/show/openSUSE:Factory/lal?expand=0&rev=11
This commit is contained in:
commit
ae86d4ad39
@ -1,3 +0,0 @@
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version https://git-lfs.github.com/spec/v1
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oid sha256:e00d15216fca06b35b2b0c27fa360ed5042c700d5dd3eaf8f249957a1e199ccf
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size 2372060
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3
lal-7.3.1.tar.xz
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3
lal-7.3.1.tar.xz
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version https://git-lfs.github.com/spec/v1
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oid sha256:6aaf7ad079e29f0450f9525096e3938d7bcc72c4a62c242800bdb7d424a8d192
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size 2363108
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16
lal.changes
16
lal.changes
@ -1,3 +1,19 @@
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-------------------------------------------------------------------
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Fri May 26 14:30:47 UTC 2023 - Atri Bhattacharya <badshah400@gmail.com>
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- Fix a couple of incorrect hashbangs on executable scripts.
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-------------------------------------------------------------------
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Tue Apr 18 10:35:22 UTC 2023 - pgajdos@suse.com
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- version update to 7.3.1
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* no changelog found
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- python-six is not required
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https://trello.com/c/MO53MocR/143-remove-python3-six
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- deleted patches
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- replace_numpy_object.patch (upstreamed)
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- swig_4_1_compat.patch (upstreamed)
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-------------------------------------------------------------------
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-------------------------------------------------------------------
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Sat Jan 28 06:06:33 UTC 2023 - Stefan Brüns <stefan.bruens@rwth-aachen.de>
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Sat Jan 28 06:06:33 UTC 2023 - Stefan Brüns <stefan.bruens@rwth-aachen.de>
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14
lal.spec
14
lal.spec
@ -36,21 +36,16 @@
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# No support for octave >= 6
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# No support for octave >= 6
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%bcond_with octave
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%bcond_with octave
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Name: lal%{psuffix}
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Name: lal%{psuffix}
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Version: 7.2.4
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Version: 7.3.1
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Release: 0
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Release: 0
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Summary: A collection of various gravitational wave data analysis routines
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Summary: A collection of various gravitational wave data analysis routines
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License: GPL-2.0-only
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License: GPL-2.0-only
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Group: Productivity/Scientific/Physics
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Group: Productivity/Scientific/Physics
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URL: https://wiki.ligo.org/Computing/LALSuite
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URL: https://wiki.ligo.org/Computing/LALSuite
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Source: https://software.igwn.org/sources/source/lalsuite/lal-%{version}.tar.xz
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Source: https://software.igwn.org/sources/source/lalsuite/lal-%{version}.tar.xz
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# PATCH-FIX-UPSTREAM -- See https://git.ligo.org/lscsoft/lalsuite/-/commit/847f9f1bf9c8e029db6426de098a963d542ab08b.patch
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Patch0: swig_4_1_compat.patch
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# PATCH-FIX-UPSTREAM -- https://git.ligo.org/lscsoft/lalsuite/-/commit/e4269307540b.patch
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Patch1: replace_numpy_object.patch
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BuildRequires: %{python_module devel}
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BuildRequires: %{python_module devel}
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BuildRequires: %{python_module numpy-devel}
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BuildRequires: %{python_module numpy-devel}
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BuildRequires: %{python_module numpy}
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BuildRequires: %{python_module numpy}
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BuildRequires: %{python_module six}
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BuildRequires: %{python_module xml}
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BuildRequires: %{python_module xml}
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BuildRequires: bc
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BuildRequires: bc
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BuildRequires: fdupes
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BuildRequires: fdupes
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@ -64,7 +59,6 @@ Requires: python-freezegun
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Requires: python-numpy
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Requires: python-numpy
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Requires: python-python-dateutil
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Requires: python-python-dateutil
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Requires: python-scipy
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Requires: python-scipy
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Requires: python-six
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Recommends: python-ligo-lw
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Recommends: python-ligo-lw
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Recommends: python-ligo-segments
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Recommends: python-ligo-segments
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# Broken on all archs where 'char' is unsigned
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# Broken on all archs where 'char' is unsigned
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@ -201,6 +195,9 @@ find %{buildroot}%{$python_sitearch} -iname \*pyc -type f \( -exec grep 'home/ab
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}
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}
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%python_expand %fdupes %{buildroot}%{$python_sitearch}/
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%python_expand %fdupes %{buildroot}%{$python_sitearch}/
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# Fix broken hashbang
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sed -Ei "1{s|(python3\.?[0-9]*)|%{_bindir}/\1|}" %{buildroot}%{_bindir}/lal_{path2cache,searchsum2cache}
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%endif
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%endif
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%check
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%check
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@ -222,7 +219,7 @@ fi
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%postun -n %{shliblalsupport} -p /sbin/ldconfig
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%postun -n %{shliblalsupport} -p /sbin/ldconfig
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%files %{python_files}
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%files %{python_files}
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%{python_sitearch}/lal
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%{python_sitearch}/lal/
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%files -n %{shliblal}
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%files -n %{shliblal}
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%{_libdir}/liblal.so.*
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%{_libdir}/liblal.so.*
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@ -238,6 +235,7 @@ fi
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%{_libdir}/liblal.so
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%{_libdir}/liblal.so
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%{_libdir}/liblalsupport.so
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%{_libdir}/liblalsupport.so
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%{_libdir}/pkgconfig/*.pc
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%{_libdir}/pkgconfig/*.pc
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%{_mandir}/man7/*.7%{?ext_man}
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%if %{with octave}
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%if %{with octave}
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%files -n octave-lal
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%files -n octave-lal
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@ -1,27 +0,0 @@
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From e4269307540b77ffc015c7be54191cf3350c798b Mon Sep 17 00:00:00 2001
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From: "duncan.macleod" <duncan.macleod@ligo.org>
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Date: Tue, 10 Jan 2023 16:30:46 +0000
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Subject: [PATCH] lal: replace numpy.object with builtin object
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numpy.object was a deprecated alias to object, see
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https://numpy.org/devdocs/release/1.20.0-notes.html#using-the-aliases-of-builtin-types-like-np-int-is-deprecated
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---
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lal/swig/SWIGTestLALPython.py | 2 +-
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1 file changed, 1 insertion(+), 1 deletion(-)
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diff --git a/lal/swig/SWIGTestLALPython.py b/lal/swig/SWIGTestLALPython.py
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index b634b2c3d7..661c6fecab 100644
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--- a/swig/SWIGTestLALPython.py
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+++ b/swig/SWIGTestLALPython.py
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@@ -135,7 +135,7 @@ def test_string_conversions():
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strs = ["a", "bc", "def"]
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sv = lal.CreateStringVector(*strs)
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assert sv.length == 3
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-assert (sv.data.astype(numpy.object) == strs).all()
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+assert (sv.data.astype(object) == strs).all()
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strs[0] = "ghijk"
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sv.data[0] = strs[0]
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strs.append("lmnopq")
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--
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GitLab
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@ -1,38 +0,0 @@
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From 847f9f1bf9c8e029db6426de098a963d542ab08b Mon Sep 17 00:00:00 2001
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From: Karl Wette <karl.wette@ligo.org>
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Date: Fri, 25 Nov 2022 17:15:19 +1100
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Subject: [PATCH] SWIG: compatibility with version 4.1.0
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- -py3 is deprecated
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- %typemaps_string_alloc() needs an extra argument
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---
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gnuscripts/lalsuite_swig.m4 | 8 +++++++-
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lal/swig/SWIGCommon.i | 8 ++++++++
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2 files changed, 15 insertions(+), 1 deletion(-)
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diff --git a/swig/SWIGCommon.i b/swig/SWIGCommon.i
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index caf7d8f365..bb6dc62e6e 100644
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--- a/swig/SWIGCommon.i
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+++ b/swig/SWIGCommon.i
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@@ -1809,10 +1809,18 @@ if (strides[I-1] == 0) {
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return res;
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}
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}
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+#if SWIG_VERSION >= 0x040100
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+%typemaps_string_alloc(%checkcode(STRING), %checkcode(char),
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+ SWIGWARN_TYPEMAP_CHARLEAK_MSG, char, LALchar,
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+ SWIG_AsLALcharPtrAndSize, SWIG_FromLALcharPtrAndSize,
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+ strlen, SWIG_strnlen, %swiglal_new_copy_array, XLALFree,
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+ "<limits.h>", CHAR_MIN, CHAR_MAX);
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+#else
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%typemaps_string_alloc(%checkcode(STRING), %checkcode(char), char, LALchar,
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SWIG_AsLALcharPtrAndSize, SWIG_FromLALcharPtrAndSize,
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strlen, SWIG_strnlen, %swiglal_new_copy_array, XLALFree,
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"<limits.h>", CHAR_MIN, CHAR_MAX);
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+#endif
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///
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/// Typemaps for string pointers. By default, treat arguments of type <tt>char**</tt> as output-only
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--
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GitLab
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