Accepting request 998349 from home:badshah400:branches:science

- Update to version 9.0.0:
- Update source URL.

OBS-URL: https://build.opensuse.org/request/show/998349
OBS-URL: https://build.opensuse.org/package/show/science/lalapps?expand=0&rev=15

lalapps-7.4.0.tar.xz

@@ -1,3 +0,0 @@
-version https://git-lfs.github.com/spec/v1
-oid sha256:c97e3b1cf6f176bd2099201cf6b723ffd2aef3f8c1f20713bfd0bab550a9318c
-size 31070256

lalapps-9.0.0.tar.xz

@@ -0,0 +1,3 @@
+version https://git-lfs.github.com/spec/v1
+oid sha256:0897b47672d0018fa3d801573c612b4584c75e37d4632ec9de22010493e73b9e
+size 2270120

lalapps-disable-testWeave-for-non-x86_64.patch

@@ -1,23 +1,8 @@
-Index: lalapps-7.2.0/src/pulsar/Weave/Makefile.am
+Index: lalapps-9.0.0/configure.ac
 ===================================================================
---- lalapps-7.2.0.orig/src/pulsar/Weave/Makefile.am
+--- lalapps-9.0.0.orig/configure.ac
-+++ lalapps-7.2.0/src/pulsar/Weave/Makefile.am
++++ lalapps-9.0.0/configure.ac
-@@ -75,5 +75,10 @@ if !CFITSIO
+@@ -260,6 +260,13 @@ AM_CPPFLAGS="-I\$(top_srcdir)/src ${AM_C
- skip_tests += $(test_scripts)
- endif
- 
-+# Skip Weave tests on non-x86_64
-+if SKIP_WEAVE_TESTS
-+skip_tests += $(test_scripts)
-+endif
-+
- # testWeave_reference_results.sh requires output from tests that compare against reference results
- testWeave_reference_results.log: testWeave_interpolating.log testWeave_non_interpolating.log testWeave_single_segment.log
-Index: lalapps-7.2.0/configure.ac
-===================================================================
---- lalapps-7.2.0.orig/configure.ac
-+++ lalapps-7.2.0/configure.ac
-@@ -318,6 +318,13 @@ AM_CPPFLAGS="-I\$(top_srcdir)/src ${AM_C
  # RedHat-derived systems.
  AC_SUBST([pkgpythondir], ["\${pkgpyexecdir}"])
  

lalapps-fix-uninitialised-var.patch

@@ -1,7 +1,7 @@
-Index: lalapps-7.4.0/src/string/StringSearch.c
+Index: lalapps-9.0.0/src/string/StringSearch.c
 ===================================================================
---- lalapps-7.4.0.orig/src/string/StringSearch.c
+--- lalapps-9.0.0.orig/src/string/StringSearch.c
-+++ lalapps-7.4.0/src/string/StringSearch.c
++++ lalapps-9.0.0/src/string/StringSearch.c
 @@ -201,7 +201,7 @@ int main(int argc,char *argv[])
    unsigned seg_length;
    StringTemplate strtemplate[MAXTEMPLATES];
@@ -10,39 +10,4 @@ Index: lalapps-7.4.0/src/string/StringSearch.c
 +  int NTemplates_fix = 0; /* number of template given by the template bank file */
    REAL8 fcutoff_fix[MAXTEMPLATES]; /* high frequency cutoffs given by the template bank file */
    SnglBurst *events=NULL;
-   MetadataTable  process;
+   ProcessTable *process;
-Index: lalapps-7.4.0/src/pulsar/HoughFstat/HierarchicalSearch.c
-===================================================================
---- lalapps-7.4.0.orig/src/pulsar/HoughFstat/HierarchicalSearch.c
-+++ lalapps-7.4.0/src/pulsar/HoughFstat/HierarchicalSearch.c
-@@ -1255,7 +1255,7 @@ void SetUpSFTs( LALStatus *status,			/**
-   REAL8 timebase, tObs, deltaFsft;
-   UINT4 k,numSFTby2;
-   LIGOTimeGPS tStartGPS, tEndGPS, refTimeGPS, tMidGPS;
--  SFTCatalogSequence catalogSeq;
-+  SFTCatalogSequence catalogSeq = {};
- 
-   REAL8 doppWings, fMin, fMax;
-   REAL8 startTime_freqLo, startTime_freqHi;
-@@ -1516,7 +1516,7 @@ void ComputeFstatHoughMap(LALStatus *sta
-   LIGOTimeGPSVector   *tsMid;
-   REAL8Vector *timeDiffV=NULL;
-   UINT8Vector hist; /* histogram vector */
--  UINT8Vector histTotal; /* total histogram vector */
-+  UINT8Vector histTotal = {}; /* total histogram vector */
-   HoughStats stats; /* statistics struct */
-   CHAR *fileStats = NULL;
-   FILE *fpStats = NULL;
-Index: lalapps-7.4.0/src/pulsar/SFTTools/splitSFTs.c
-===================================================================
---- lalapps-7.4.0.orig/src/pulsar/SFTTools/splitSFTs.c
-+++ lalapps-7.4.0/src/pulsar/SFTTools/splitSFTs.c
-@@ -204,7 +204,7 @@ int main( int argc, char **argv )
- {
-   int arg;                        /* current command-line argument */
-   unsigned int bin;               /* current bin */
--  struct headertag2 hd, lasthd;   /* header of input SFT */
-+  struct headertag2 hd, lasthd = {};   /* header of input SFT */
-   FILE *fpin;                     /* currently open input filepointer */
-   FILE *fpout;                    /* currently open output filepointer */
-   char *oldcomment;               /* comment of input SFT */

lalapps.changes

@@ -1,3 +1,10 @@
+-------------------------------------------------------------------
+Sat Aug 20 02:48:16 UTC 2022 - Atri Bhattacharya <badshah400@gmail.com>
+
+- Update to version 9.0.0:
+  * No release notes.
+- Update source URL.
+
 -------------------------------------------------------------------
 Mon Jan  3 00:52:11 UTC 2022 - Atri Bhattacharya <badshah400@gmail.com>
 

lalapps.spec

@@ -20,13 +20,13 @@
 # NEP 29: astropy, numpy, scipy do not have a python36 flavor package in TW
 %define skip_python36 1
 Name:           lalapps
-Version:        7.4.0
+Version:        9.0.0
 Release:        0
 Summary:        LSC Algorithm Library Applications
 License:        GPL-2.0-or-later
 Group:          Productivity/Scientific/Physics
 URL:            https://wiki.ligo.org/Computing/DASWG/LALSuite
-Source:         http://software.ligo.org/lscsoft/source/lalsuite/%{name}-%{version}.tar.xz
+Source:         https://software.igwn.org/sources/source/lalsuite/%{name}-%{version}.tar.xz
 # PATCH-FIX-UPSTREAM lalapps-fix-uninitialised-var.patch badshah400@gmail.com -- Fix usage of uninitialised variable
 Patch0:         lalapps-fix-uninitialised-var.patch
 # PATCH-FIX-UPSTREAM lalapps-disable-testWeave-for-non-x86_64.patch badshah400@gmail.com -- Disable Weave related tests on all but x86_64 where tolerance errors show up, see https://git.ligo.org/lscsoft/lalsuite/-/issues/105