Accepting request 887037 from science
OBS-URL: https://build.opensuse.org/request/show/887037 OBS-URL: https://build.opensuse.org/package/show/openSUSE:Factory/lalapps?expand=0&rev=2
This commit is contained in:
Dominique Leuenberger
Git OBS Bridge
commit
353ce2e590
@ -1,3 +0,0 @@
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version https://git-lfs.github.com/spec/v1
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oid sha256:fffa819168e2bb4ad56477281b3ebfc7eeabd950534775b806562a536d134df8
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size 11077588
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3
lalapps-7.2.0.tar.xz
Normal file
3
lalapps-7.2.0.tar.xz
Normal file
@ -0,0 +1,3 @@
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version https://git-lfs.github.com/spec/v1
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oid sha256:6b241318c17cf9eac746078b33c0c664e3c94174c328c4c8184363ddff0b4e5d
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size 29272088
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@ -1,8 +1,8 @@
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Index: lalapps-6.26.0/src/string/StringSearch.c
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Index: lalapps-7.1.0/src/string/StringSearch.c
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===================================================================
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--- lalapps-6.26.0.orig/src/string/StringSearch.c
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+++ lalapps-6.26.0/src/string/StringSearch.c
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@@ -202,7 +202,7 @@ int main(int argc,char *argv[])
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--- lalapps-7.1.0.orig/src/string/StringSearch.c
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+++ lalapps-7.1.0/src/string/StringSearch.c
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@@ -201,7 +201,7 @@ int main(int argc,char *argv[])
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unsigned seg_length;
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StringTemplate strtemplate[MAXTEMPLATES];
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int NTemplates;
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@ -11,23 +11,10 @@ Index: lalapps-6.26.0/src/string/StringSearch.c
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REAL8 fcutoff_fix[MAXTEMPLATES]; /* high frequency cutoffs given by the template bank file */
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SnglBurst *events=NULL;
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MetadataTable process;
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Index: lalapps-6.26.0/src/pulsar/SFTTools/SFTvalidate.c
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Index: lalapps-7.1.0/src/pulsar/HoughFstat/HierarchicalSearch.c
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===================================================================
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--- lalapps-6.26.0.orig/src/pulsar/SFTTools/SFTvalidate.c
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+++ lalapps-6.26.0/src/pulsar/SFTTools/SFTvalidate.c
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@@ -59,7 +59,7 @@ int main(int argc, char** argv) {
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/* and read successive SFTs blocks from the file and validate CRC
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checksums */
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for (count=0; 1; count++) {
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- struct headertag2 info,lastinfo;
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+ struct headertag2 info,lastinfo={};
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int err=0, swapendian, move, j;
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err=ReadSFTHeader(fp, &info, NULL, &swapendian, 1);
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Index: lalapps-6.26.0/src/pulsar/HoughFstat/HierarchicalSearch.c
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===================================================================
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--- lalapps-6.26.0.orig/src/pulsar/HoughFstat/HierarchicalSearch.c
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+++ lalapps-6.26.0/src/pulsar/HoughFstat/HierarchicalSearch.c
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--- lalapps-7.1.0.orig/src/pulsar/HoughFstat/HierarchicalSearch.c
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+++ lalapps-7.1.0/src/pulsar/HoughFstat/HierarchicalSearch.c
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@@ -1255,7 +1255,7 @@ void SetUpSFTs( LALStatus *status, /**
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REAL8 timebase, tObs, deltaFsft;
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UINT4 k,numSFTby2;
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@ -46,11 +33,11 @@ Index: lalapps-6.26.0/src/pulsar/HoughFstat/HierarchicalSearch.c
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HoughStats stats; /* statistics struct */
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CHAR *fileStats = NULL;
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FILE *fpStats = NULL;
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Index: lalapps-6.26.0/src/pulsar/SFTTools/splitSFTs.c
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Index: lalapps-7.1.0/src/pulsar/SFTTools/splitSFTs.c
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===================================================================
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--- lalapps-6.26.0.orig/src/pulsar/SFTTools/splitSFTs.c
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+++ lalapps-6.26.0/src/pulsar/SFTTools/splitSFTs.c
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@@ -199,7 +199,7 @@ int main( int argc, char **argv )
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--- lalapps-7.1.0.orig/src/pulsar/SFTTools/splitSFTs.c
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+++ lalapps-7.1.0/src/pulsar/SFTTools/splitSFTs.c
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@@ -196,7 +196,7 @@ int main( int argc, char **argv )
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{
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int arg; /* current command-line argument */
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unsigned int bin; /* current bin */
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@ -1,3 +1,24 @@
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-------------------------------------------------------------------
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Tue Apr 20 13:53:56 UTC 2021 - Ben Greiner <code@bnavigator.de>
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- Fix runtime requirement for python-lal 7.1.0
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-------------------------------------------------------------------
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Sat Feb 27 00:02:59 UTC 2021 - Atri Bhattacharya <badshah400@gmail.com>
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- Update to version 7.2.0 (no release notes).
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-------------------------------------------------------------------
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Fri Feb 12 21:51:42 UTC 2021 - Ben Greiner <code@bnavigator.de>
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- Update to version 7.1.0
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* no public changelog
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- Skip python36 build. Due to NEP 29, astropy, numpy, scipy and co.
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do not have a python36 flavored package in TW
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- Refresh lalapps-fix-uninitialised-var.patch
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- Enable test suite
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- Fix the python subpackage setup
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-------------------------------------------------------------------
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Mon Nov 2 10:49:34 UTC 2020 - Atri Bhattacharya <badshah400@gmail.com>
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88
lalapps.spec
88
lalapps.spec
@ -1,7 +1,7 @@
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#
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# spec file for package lalapps
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#
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# Copyright (c) 2020 SUSE LLC
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# Copyright (c) 2021 SUSE LLC
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#
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# All modifications and additions to the file contributed by third parties
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# remain the property of their copyright owners, unless otherwise agreed
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@ -17,8 +17,10 @@
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%define skip_python2 1
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# NEP 29: astropy, numpy, scipy do not have a python36 flavor package in TW
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%define skip_python36 1
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Name: lalapps
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Version: 6.26.1
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Version: 7.2.0
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Release: 0
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Summary: LSC Algorithm Library Applications
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License: GPL-2.0-or-later
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@ -30,12 +32,12 @@ Patch0: lalapps-fix-uninitialised-var.patch
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BuildRequires: %{python_module astropy}
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BuildRequires: %{python_module devel}
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BuildRequires: %{python_module glue}
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BuildRequires: %{python_module lal >= 6.21.0}
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BuildRequires: %{python_module lalburst >= 1.5.4}
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BuildRequires: %{python_module lal >= 7.1.0}
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BuildRequires: %{python_module lalburst >= 1.5.3}
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BuildRequires: %{python_module lalframe >= 1.5.0}
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BuildRequires: %{python_module lalinference >= 1.11.0}
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BuildRequires: %{python_module lalmetaio >= 1.6.0}
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BuildRequires: %{python_module lalpulsar >= 1.18.0}
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BuildRequires: %{python_module lalinference >= 2.0.0}
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BuildRequires: %{python_module lalmetaio >= 2.0.0}
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BuildRequires: %{python_module lalpulsar >= 3.0.0}
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BuildRequires: %{python_module matplotlib}
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BuildRequires: %{python_module numpy-devel}
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BuildRequires: %{python_module numpy}
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@ -47,28 +49,25 @@ BuildRequires: pkgconfig
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BuildRequires: python-rpm-macros
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BuildRequires: swig
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BuildRequires: pkgconfig(fftw3)
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BuildRequires: pkgconfig(framel)
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BuildRequires: pkgconfig(framel) >= 8.39.2
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BuildRequires: pkgconfig(gsl)
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BuildRequires: pkgconfig(lal) >= 6.21.0
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BuildRequires: pkgconfig(lalburst) >= 1.5.4
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BuildRequires: pkgconfig(lal) >= 7.1.0
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BuildRequires: pkgconfig(lalburst) >= 1.5.3
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BuildRequires: pkgconfig(lalframe) >= 1.5.0
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BuildRequires: pkgconfig(lalinference) >= 1.11.0
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BuildRequires: pkgconfig(lalinspiral) >= 1.10.0
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BuildRequires: pkgconfig(lalmetaio) >= 1.6.0
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BuildRequires: pkgconfig(lalpulsar) >= 1.18.0
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BuildRequires: pkgconfig(lalsimulation) >= 1.10.0
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Requires: python3-lal >= 6.21.0
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Requires: python3-lalburst >= 1.5.4
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Requires: python3-lalframe >= 1.5.0
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Requires: python3-lalinference >= 1.11.0
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Requires: python3-lalinspiral >= 1.10.0
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Requires: python3-lalmetaio >= 1.6.0
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Requires: python3-lalpulsar >= 1.18.0
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Requires: python3-lalsimulation >= 1.10.0
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Requires: python3-numpy
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Requires: python3-scipy
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BuildRequires: pkgconfig(lalinference) >= 2.0.0
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BuildRequires: pkgconfig(lalinspiral) >= 2.0.0
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BuildRequires: pkgconfig(lalmetaio) >= 2.0.0
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BuildRequires: pkgconfig(lalpulsar) >= 3.0.0
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BuildRequires: pkgconfig(lalsimulation) >= 2.5.0
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# SECTION For tests
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BuildRequires: %{python_module pytest}
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BuildRequires: bc
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BuildRequires: lalpulsar-data
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Requires: python3-%{name} = %{version}
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# /SECTION
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# 32-bit no longer supported upstream
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ExcludeArch: %{ix86}
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%define python_subpackage_only 1
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%python_subpackages
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%description
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@ -76,6 +75,31 @@ The LSC Algorithm Library Applications for gravitational wave data analysis.
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This package contains applications that are built on tools in the LSC
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Algorithm Library.
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%package -n python-%{name}
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Summary: LSC Algorithm Library Applications
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Group: Productivity/Scientific/Physics
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Requires: python-h5py
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Requires: python-lal >= 7.1.0
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Requires: python-lalburst >= 1.5.3
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Requires: python-lalframe >= 1.5.0
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Requires: python-lalinference >= 2.0.0
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Requires: python-lalinspiral >= 2.0.0
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Requires: python-lalmetaio >= 2.0.0
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Requires: python-lalpulsar >= 3.0.0
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Requires: python-lalsimulation >= 2.5.0
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Requires: python-ligo-lw
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Requires: python-ligo-segments
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Requires: python-matplotlib
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Requires: python-numpy
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Requires: python-scipy
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%description -n python-%{name}
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The LSC Algorithm Library Applications for gravitational wave data analysis.
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This package contains applications that are built on tools in the LSC
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Algorithm Library.
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This package contains the python files
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%prep
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%autosetup -p1
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@ -84,7 +108,7 @@ sed -Ei "1{s|/usr/bin/env python|%{_bindir}/python3|}" \
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src/pulsar/HeterodyneSearch/make_frame_cache
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%build
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%{python_expand # Necessary to run %%configure with both py2 and py3
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%{python_expand # Necessary to run %%configure for all active python flavors
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export PYTHON=%{_bindir}/$python
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mkdir ../$python
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cp -pr ./ ../$python
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@ -98,7 +122,7 @@ popd
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}
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%install
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%{python_expand # py2 and py3 make_install
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%{python_expand # install for all active python flavors
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export PYTHON=$python
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pushd ../$python
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%make_install
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@ -144,6 +168,14 @@ find %{buildroot} -type f -name "*.la" -delete -print
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%python_expand %fdupes %{buildroot}%{$python_sitearch}/%{name}/
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%fdupes %{buildroot}/%{_datadir}/%{name}/
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%check
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%{python_expand #
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export PYTHON=$python
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pushd ../$python
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%make_build check
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popd
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}
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%files -n %{name}
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%license COPYING
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%{_bindir}/*
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@ -151,7 +183,7 @@ find %{buildroot} -type f -name "*.la" -delete -print
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%{_mandir}/man1/*
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%config %{_sysconfdir}/profile.d/%{name}.*
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%files %{python_files}
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%files %{python_files %{name}}
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%{python_sitearch}/*
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%changelog
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