Accepting request 540596 from home:cjunghans:branches:science:HPC

- added 8.patch - circle_init_builtin: fix return value
- initial add of v1.2

OBS-URL: https://build.opensuse.org/request/show/540596
OBS-URL: https://build.opensuse.org/package/show/science:HPC/mpibash?expand=0&rev=1

.gitattributes

@@ -0,0 +1,23 @@
+## Default LFS
+*.7z filter=lfs diff=lfs merge=lfs -text
+*.bsp filter=lfs diff=lfs merge=lfs -text
+*.bz2 filter=lfs diff=lfs merge=lfs -text
+*.gem filter=lfs diff=lfs merge=lfs -text
+*.gz filter=lfs diff=lfs merge=lfs -text
+*.jar filter=lfs diff=lfs merge=lfs -text
+*.lz filter=lfs diff=lfs merge=lfs -text
+*.lzma filter=lfs diff=lfs merge=lfs -text
+*.obscpio filter=lfs diff=lfs merge=lfs -text
+*.oxt filter=lfs diff=lfs merge=lfs -text
+*.pdf filter=lfs diff=lfs merge=lfs -text
+*.png filter=lfs diff=lfs merge=lfs -text
+*.rpm filter=lfs diff=lfs merge=lfs -text
+*.tbz filter=lfs diff=lfs merge=lfs -text
+*.tbz2 filter=lfs diff=lfs merge=lfs -text
+*.tgz filter=lfs diff=lfs merge=lfs -text
+*.ttf filter=lfs diff=lfs merge=lfs -text
+*.txz filter=lfs diff=lfs merge=lfs -text
+*.whl filter=lfs diff=lfs merge=lfs -text
+*.xz filter=lfs diff=lfs merge=lfs -text
+*.zip filter=lfs diff=lfs merge=lfs -text
+*.zst filter=lfs diff=lfs merge=lfs -text

.gitignore

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+.osc

8.patch

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+From 29995967e6ffb9b67ff239b7c2549348d90187da Mon Sep 17 00:00:00 2001
+From: Christoph Junghans <junghans@lanl.gov>
+Date: Fri, 10 Nov 2017 09:05:29 -0700
+Subject: [PATCH] circle_init_builtin: added missing return value
+
+---
+ src/circle-init.c | 2 ++
+ 1 file changed, 2 insertions(+)
+
+diff --git a/src/circle-init.c b/src/circle-init.c
+index 771d382..da605ae 100644
+--- a/src/circle-init.c
++++ b/src/circle-init.c
+@@ -171,6 +171,8 @@ circle_init_builtin (WORD_LIST *list)
+   for (func = all_circle_builtins; *func; func++)
+     if (load_circle_builtin(*func) != EXECUTION_SUCCESS)
+       return EXECUTION_FAILURE;
++
++  return EXECUTION_SUCCESS;
+ }
+ 
+ /* Define the documentation for the circle_init builtin. */

mpibash-1.2.tar.gz

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+version https://git-lfs.github.com/spec/v1
+oid sha256:5c2faaa74464111205dbae4799bd89c2425810ec3708d004237b42d620c8be57
+size 347083

mpibash.changes

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+-------------------------------------------------------------------
+Fri Nov 10 16:09:11 UTC 2017 - junghans@votca.org
+
+- added 8.patch - circle_init_builtin: fix return value
+
+-------------------------------------------------------------------
+Fri Nov 10 15:41:49 UTC 2017 - junghans@votca.org
+
+- initial add of v1.2
+

mpibash.spec

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+#
+# spec file for package mpibash
+#
+# Copyright (c) 2017 SUSE LINUX GmbH, Nuernberg, Germany.
+#
+# All modifications and additions to the file contributed by third parties
+# remain the property of their copyright owners, unless otherwise agreed
+# upon. The license for this file, and modifications and additions to the
+# file, is the same license as for the pristine package itself (unless the
+# license for the pristine package is not an Open Source License, in which
+# case the license is the MIT License). An "Open Source License" is a
+# license that conforms to the Open Source Definition (Version 1.9)
+# published by the Open Source Initiative.
+
+# Please submit bugfixes or comments via http://bugs.opensuse.org/
+#
+
+%ifarch ppc64
+%define mpi_implem openmpi
+%else
+%define mpi_implem openmpi2
+%endif
+
+Name:           mpibash
+Version:        1.2
+Release:        0
+Summary:        Parallel scripting right from the Bourne-Again Shell
+License:        GPL-3.0+
+Group:          Productivity/Networking/Other
+Url:            https://github.com/lanl/MPI-Bash
+Source0:        https://github.com/lanl/MPI-Bash/releases/download/v%{version}/mpibash-%{version}.tar.gz
+#PATCH-FIX-UPSTREAM - 8.patch - circle_init_builtin: fix return value
+Patch0:         https://patch-diff.githubusercontent.com/raw/lanl/MPI-Bash/pull/8.patch
+BuildRequires:  bash-devel
+BuildRequires:  %{mpi_implem}
+BuildRequires:  %{mpi_implem}-devel
+BuildRequires:  libcircle-devel
+
+BuildRoot:      %{_tmppath}/%{name}-%{version}-build
+
+%description
+MPI-Bash makes it easy to parallelize Bash scripts that run a set of
+Linux commands independently over a large number of input files.
+Because MPI-Bash includes various MPI functions for data transfer and
+synchronization, it is not limited to embarrassingly parallel workloads
+but can incorporate phased operations (i.e., all workers must finish
+operation X before any worker is allowed to begin operation Y).
+
+%package examples
+Summary:        Example Scripts for %{name}
+Group:          Productivity/Scientific/Chemistry
+Requires:       %{name} = %{version}
+
+%description examples
+MPI-Bash makes it easy to parallelize Bash scripts that run a set of
+Linux commands independently over a large number of input files.
+Because MPI-Bash includes various MPI functions for data transfer and
+synchronization, it is not limited to embarrassingly parallel workloads
+but can incorporate phased operations (i.e., all workers must finish
+operation X before any worker is allowed to begin operation Y).
+
+This package contains example scripts for mpibash.
+
+
+%prep
+%setup -q
+%patch0 -p1
+
+%build
+. %{_libdir}/mpi/gcc/%{mpi_implem}/bin/mpivars.sh
+%configure --with-bashdir=/usr/include/bash --docdir=%{_docdir}/%{name} CC=mpicc
+make %{?_smp_mflags}
+
+%install
+make %{?_smp_mflags} DESTDIR=%{buildroot} install
+# Fix shebang
+sed -i '1s@/usr/bin/env bash@/bin/bash@' %{buildroot}/%{_bindir}/mpibash
+sed -i '1s@env mpibash@mpibash@' %{buildroot}/%{_docdir}/%{name}/examples/* %{buildroot}/%{_bindir}/m*
+head -1 %{buildroot}/%{_docdir}/%{name}/examples/*
+head -1 %{buildroot}/%{_bindir}/m*
+
+%files
+%defattr(-,root,root,-)
+%{_bindir}/m*
+%{_libdir}/%{name}/
+%{_mandir}/man1/m*
+%{_docdir}/%{name}
+%exclude %{_docdir}/%{name}/examples
+
+%files examples
+%defattr(-,root,root,-)
+%{_docdir}/%{name}/examples