Commit Graph

33 Commits

Author SHA256 Message Date
Ana Guerrero
0db1484ce3 Accepting request 1151418 from science:HPC
Prepare for RPM 4.20 (forwarded request 1151411 from dimstar)

OBS-URL: https://build.opensuse.org/request/show/1151418
OBS-URL: https://build.opensuse.org/package/show/openSUSE:Factory/openmpi4?expand=0&rev=13
2024-02-27 21:44:18 +00:00
7a56710999 Accepting request 1151411 from home:dimstar:rpm4.20:o
Prepare for RPM 4.20

OBS-URL: https://build.opensuse.org/request/show/1151411
OBS-URL: https://build.opensuse.org/package/show/science:HPC/openmpi4?expand=0&rev=32
2024-02-26 12:48:36 +00:00
Ana Guerrero
b77693939b Accepting request 1116699 from science:HPC
OBS-URL: https://build.opensuse.org/request/show/1116699
OBS-URL: https://build.opensuse.org/package/show/openSUSE:Factory/openmpi4?expand=0&rev=12
2023-10-11 21:54:07 +00:00
c4a21f8bf2 Accepting request 1116692 from home:NMorey:branches:science:HPC
- Drop %vers macro so that the Version tag can be parsed more easily

OBS-URL: https://build.opensuse.org/request/show/1116692
OBS-URL: https://build.opensuse.org/package/show/science:HPC/openmpi4?expand=0&rev=30
2023-10-10 13:57:48 +00:00
Ana Guerrero
080cfa4c6a Accepting request 1114904 from science:HPC
OBS-URL: https://build.opensuse.org/request/show/1114904
OBS-URL: https://build.opensuse.org/package/show/openSUSE:Factory/openmpi4?expand=0&rev=11
2023-10-04 20:30:29 +00:00
64e40dd105 Accepting request 1114836 from home:NMorey:branches:science:HPC
- Update to 4.1.6:
  - Update embedded PMIx to 3.2.5.
  - Fix issue with buffered sends and MTL-based interfaces (Libfabric,
    PSM, Portals).
  - Add missing MPI_F_STATUS_SIZE to mpi.h.
  - Update Fortran mpi module configure check to be more correct.
  - Update to properly handle PMIx v>=4.2.3.
  - Fix minor issues and add some minor performance optimizations with
    OFI support.
  - Support the "striping_factor" and "striping_unit" MPI_Info names
    recomended by the MPI standard for parallel IO.
  - Fixed some minor issues with UCX support.
  - Minor optimization for 0-byte MPI_Alltoallw (i.e., make it a no-op).

OBS-URL: https://build.opensuse.org/request/show/1114836
OBS-URL: https://build.opensuse.org/package/show/science:HPC/openmpi4?expand=0&rev=28
2023-10-03 07:04:39 +00:00
Dominique Leuenberger
6c9c1de672 Accepting request 1102781 from science:HPC
OBS-URL: https://build.opensuse.org/request/show/1102781
OBS-URL: https://build.opensuse.org/package/show/openSUSE:Factory/openmpi4?expand=0&rev=10
2023-08-09 15:23:56 +00:00
0c1f13de15 Accepting request 1102760 from home:NMorey:branches:science:HPC
- Drop support for TrueScale (bsc#1212146)

OBS-URL: https://build.opensuse.org/request/show/1102760
OBS-URL: https://build.opensuse.org/package/show/science:HPC/openmpi4?expand=0&rev=26
2023-08-07 21:28:31 +00:00
Dominique Leuenberger
37eb378190 Accepting request 1101767 from science:HPC
Automatic submission by obs-autosubmit

OBS-URL: https://build.opensuse.org/request/show/1101767
OBS-URL: https://build.opensuse.org/package/show/openSUSE:Factory/openmpi4?expand=0&rev=9
2023-08-04 13:02:34 +00:00
4092457313 Accepting request 1100770 from home:NMorey:branches:science:HPC
- Update to 4.1.5:
  - Fix crash in one  -sided applications for certain process layouts.
  - Update embedded OpenPMIx to version 3.2.4
  - Backport patches to Libevent for CVE  -2016  -10195, CVE  -2016  -10196, and
    CVE  -2016  -10197.  Note that Open MPI's internal libevent does not
    use the impacted portions of the Libevent code base.
  - SHMEM improvements:
    - Fix initializer bugs in SHMEM interface.
    - Fix unsigned type comparisons generating warnings.
    - Fix use after clear issue in shmem_ds_reset.
  - UCX improvements
    - Fix memory registration bug that could occur when UCX was built
      but not selected.
    - Reduce overhead of add_procs with intercommunicators.
    - Enable multi_send_nb by default.
    - Call opal_progress while waiting for a UCX fence to complete.
  - Fix data corruption bug in osc/rdma component.
  - Fix overflow bug in alltoall collective
  - Fix crash when displaying topology.
  - Add some MPI_F_XXX constants that were missing from mpi.h.
  - coll/ucc bug fixes.

OBS-URL: https://build.opensuse.org/request/show/1100770
OBS-URL: https://build.opensuse.org/package/show/science:HPC/openmpi4?expand=0&rev=24
2023-07-26 07:39:05 +00:00
Richard Brown
33b8838509 Accepting request 1006489 from science:HPC
OBS-URL: https://build.opensuse.org/request/show/1006489
OBS-URL: https://build.opensuse.org/package/show/openSUSE:Factory/openmpi4?expand=0&rev=8
2022-10-01 15:42:11 +00:00
Nicolas Morey-Chaisemartin
a091d2120f Accepting request 1006488 from home:NMoreyChaisemartin:branches:science:HPC
- Replace btl-openib-Add-VF-support-for-ConnectX-5-and-6.patch
  by btl-openib-Add-VF-support-for-ConnectX-4-5-and-6.patch to add ConnectX4 VF suppor

OBS-URL: https://build.opensuse.org/request/show/1006488
OBS-URL: https://build.opensuse.org/package/show/science:HPC/openmpi4?expand=0&rev=22
2022-09-27 18:17:49 +00:00
Nicolas Morey-Chaisemartin
38e2907676 Accepting request 1004064 from home:NMoreyChaisemartin:branches:science:HPC
- Enable libfabric on all arch
- Switch to external libevent for all flavors
- Switch to external hwloc and PMIx for HPC builds
- Update rpmlintrc file to ignore missing libname suffix in libopenmpi packages
- Add patch btl-openib-Add-VF-support-for-ConnectX-5-and-6.patch to support
  ConnectX 5 and 6 VF

OBS-URL: https://build.opensuse.org/request/show/1004064
OBS-URL: https://build.opensuse.org/package/show/science:HPC/openmpi4?expand=0&rev=21
2022-09-16 09:20:06 +00:00
Dominique Leuenberger
4060e22973 Accepting request 1001218 from science:HPC
OBS-URL: https://build.opensuse.org/request/show/1001218
OBS-URL: https://build.opensuse.org/package/show/openSUSE:Factory/openmpi4?expand=0&rev=7
2022-09-06 11:00:49 +00:00
Nicolas Morey-Chaisemartin
dd1d0e5481 Accepting request 992639 from home:dirkmueller:Factory
- update to 4.1.4:
  * Fix possible length integer overflow in numerous non-blocking collective
  operations.
  * Fix segmentation fault in UCX if MPI Tool interface is finalized before
  MPI_Init is called.
  * Remove /usr/bin/python dependency in configure.
  * Fix OMPIO issue with long double etypes.
  * Update treematch topology component to fix numerous correctness issues.
  * Fix memory leak in UCX MCA parameter registration.
  * Fix long operation closing file descriptors on non-Linux systems that
  can appear as a hang to users.
  * Fix for attribute handling on GCC 11 due to pointer aliasing.
  * Fix multithreaded race in UCX PML's datatype handling.
  * Fix a correctness issue in CUDA Reduce algorithm.
  * Fix compilation issue with CUDA GPUDirect RDMA support.
  * Fix to make shmem_calloc(..., 0) conform to the OpenSHMEM specification.
  * Add UCC collectives component.
  * Fix divide by zero issue in OMPI IO component.
  * Fix compile issue with libnl when not in standard search locations.
  * Fixed a seg fault in the smcuda BTL.  Thanks to Moritz Kreutzer and
  @Stadik for reporting the issue.
  * Added support for ELEMENTAL to the MPI handle comparison functions
  in the mpi_f08 module.  Thanks to Salvatore Filippone for raising
  the issue.
  * Minor datatype performance improvements in the CUDA-based code paths.
  * Fix MPI_ALLTOALLV when used with MPI_IN_PLACE.
  * Fix MPI_BOTTOM handling for non-blocking collectives.  Thanks to
  Lisandro Dalcin for reporting the problem.
  * Enable OPAL memory hooks by default for UCX.
  * Many compiler warnings fixes, particularly for newer versions of

OBS-URL: https://build.opensuse.org/request/show/992639
OBS-URL: https://build.opensuse.org/package/show/science:HPC/openmpi4?expand=0&rev=19
2022-09-05 08:14:10 +00:00
Dominique Leuenberger
06d42de453 Accepting request 889565 from science:HPC
Change default openmpi to openmpi4
- openmpi4 is now the default openmpi for releases > 15.3
- Add orted-mpir-add-version-to-shared-library.patch to fix unversionned library
- Change RPM macros install path to %{_rpmmacrodir}

- Update to version 4.1.1
  - Fix a number of datatype issues, including an issue with
    improper handling of partial datatypes that could lead to
    an unexpected application failure.
  - Change UCX PML to not warn about MPI_Request leaks during
    MPI_FINALIZE by default.  The old behavior can be restored with
    the mca_pml_ucx_request_leak_check MCA parameter.
  - Reverted temporary solution that worked around launch issues in
    SLURM v20.11.{0,1,2}. SchedMD encourages users to avoid these
    versions and to upgrade to v20.11.3 or newer.
  - Updated PMIx to v3.2.2.
  - Disabled gcc built-in atomics by default on aarch64 platforms.
  - Disabled UCX PML when UCX v1.8.0 is detected. UCX version 1.8.0 has a bug that
    may cause data corruption when its TCP transport is used in conjunction with
    the shared memory transport. UCX versions prior to v1.8.0 are not affected by
    this issue. Thanks to @ksiazekm for reporting the issue.
  - Fixed detection of available UCX transports/devices to better inform PML
    prioritization.
  - Fixed SLURM support to mark ORTE daemons as non-MPI tasks.
  - Improved AVX detection to more accurately detect supported
    platforms.  Also improved the generated AVX code, and switched to
    using word-based MCA params for the op/avx component (vs. numeric
    big flags).
  - Improved OFI compatibility support and fixed memory leaks in error
    handling paths.
  - Improved HAN collectives with support for Barrier and Scatter. Thanks

OBS-URL: https://build.opensuse.org/request/show/889565
OBS-URL: https://build.opensuse.org/package/show/openSUSE:Factory/openmpi4?expand=0&rev=6
2021-05-02 16:35:56 +00:00
Nicolas Morey-Chaisemartin
1986d94aaf - Add orted-mpir-add-version-to-shared-library.patch to fix unversionned library
- Change RPM macros install path to %{_rpmmacrodir}

OBS-URL: https://build.opensuse.org/package/show/science:HPC/openmpi4?expand=0&rev=17
2021-04-30 15:10:32 +00:00
Nicolas Morey-Chaisemartin
dbbdfa5742 Accepting request 889294 from home:NMoreyChaisemartin:branches:science:HPC
- openmpi4 is now the default openmpi for releases > 15.3

OBS-URL: https://build.opensuse.org/request/show/889294
OBS-URL: https://build.opensuse.org/package/show/science:HPC/openmpi4?expand=0&rev=16
2021-04-29 12:44:14 +00:00
Nicolas Morey-Chaisemartin
b3c1bfbb9b Accepting request 889006 from home:NMoreyChaisemartin:branches:science:HPC
- Update to version 4.1.1
  - Fix a number of datatype issues, including an issue with
    improper handling of partial datatypes that could lead to
    an unexpected application failure.
  - Change UCX PML to not warn about MPI_Request leaks during
    MPI_FINALIZE by default.  The old behavior can be restored with
    the mca_pml_ucx_request_leak_check MCA parameter.
  - Reverted temporary solution that worked around launch issues in
    SLURM v20.11.{0,1,2}. SchedMD encourages users to avoid these
    versions and to upgrade to v20.11.3 or newer.
  - Updated PMIx to v3.2.2.
  - Disabled gcc built-in atomics by default on aarch64 platforms.
  - Disabled UCX PML when UCX v1.8.0 is detected. UCX version 1.8.0 has a bug that
    may cause data corruption when its TCP transport is used in conjunction with
    the shared memory transport. UCX versions prior to v1.8.0 are not affected by
    this issue. Thanks to @ksiazekm for reporting the issue.
  - Fixed detection of available UCX transports/devices to better inform PML
    prioritization.
  - Fixed SLURM support to mark ORTE daemons as non-MPI tasks.
  - Improved AVX detection to more accurately detect supported
    platforms.  Also improved the generated AVX code, and switched to
    using word-based MCA params for the op/avx component (vs. numeric
    big flags).
  - Improved OFI compatibility support and fixed memory leaks in error
    handling paths.
  - Improved HAN collectives with support for Barrier and Scatter. Thanks
    to @EmmanuelBRELLE for these changes and the relevant bug fixes.
  - Fixed MPI debugger support (i.e., the MPIR_Breakpoint() symbol).
    Thanks to @louisespellacy-arm for reporting the issue.
  - Fixed ORTE bug that prevented debuggers from reading MPIR_Proctable.

OBS-URL: https://build.opensuse.org/request/show/889006
OBS-URL: https://build.opensuse.org/package/show/science:HPC/openmpi4?expand=0&rev=15
2021-04-29 05:57:54 +00:00
Richard Brown
a3ca4c5ef9 Accepting request 882294 from science:HPC
- Update to version 4.1.0
  * collectives: Add HAN and ADAPT adaptive collectives components.
    Both components are off by default and can be enabled by specifying
    "mpirun --mca coll_adapt_priority 100 --mca coll_han_priority 100 ...".
    We intend to enable both by default in Open MPI 5.0.
  * OMPIO is now the default for MPI-IO on all filesystems, including
    Lustre (prior to this, ROMIO was the default for Lustre).  Many
    thanks to Mark Dixon for identifying MPI I/O issues and providing
    access to Lustre systems for testing.
  * Minor MPI one-sided RDMA performance improvements.
  * Fix hcoll MPI_SCATTERV with MPI_IN_PLACE.
  * Add AVX support for MPI collectives.
  * Updates to mpirun(1) about "slots" and PE=x values.
  * Fix buffer allocation for large environment variables.  Thanks to
    @zrss for reporting the issue.
  * Upgrade the embedded OpenPMIx to v3.2.2.
  * Fix issue with extra-long values in MCA files.  Thanks to GitHub
    user @zrss for bringing the issue to our attention.
  * UCX: Fix zero-sized datatype transfers.
  * Fix --cpu-list for non-uniform modes.
  * Fix issue in PMIx callback caused by missing memory barrier on Arm platforms.
  * OFI MTL: Various bug fixes.
  * Fixed issue where MPI_TYPE_CREATE_RESIZED would create a datatype
    with unexpected extent on oddly-aligned datatypes.
  * collectives: Adjust default tuning thresholds for many collective
    algorithms
  * runtime: fix situation where rank-by argument does not work
  * Portals4: Clean up error handling corner cases
  * runtime: Remove --enable-install-libpmix option, which has not
    worked since it was added
  * UCX: Allow UCX 1.8 to be used with the btl uct
  * UCX: Replace usage of the deprecated NB API of UCX with NBX
  * OMPIO: Add support for the IME file system
  * OFI/libfabric: Added support for multiple NICs
  * OFI/libfabric: Added support for Scalable Endpoints
  * OFI/libfabric: Added btl for one-sided support
  * OFI/libfabric: Multiple small bugfixes
  * libnbc: Adding numerous performance-improving algorithms
- Removed: reproducible.patch - replaced by spec file settings.

OBS-URL: https://build.opensuse.org/request/show/882294
OBS-URL: https://build.opensuse.org/package/show/openSUSE:Factory/openmpi4?expand=0&rev=5
2021-04-01 12:17:34 +00:00
Nicolas Morey-Chaisemartin
d47d4dad1b Add comment about SOURCE_DATE_EPOCH
OBS-URL: https://build.opensuse.org/package/show/science:HPC/openmpi4?expand=0&rev=13
2021-03-31 07:29:38 +00:00
Nicolas Morey-Chaisemartin
1d2406b740 Accepting request 882166 from home:eeich:branches:science:HPC
- Update to version 4.1.0
  * collectives: Add HAN and ADAPT adaptive collectives components.
    Both components are off by default and can be enabled by specifying
    "mpirun --mca coll_adapt_priority 100 --mca coll_han_priority 100 ...".
    We intend to enable both by default in Open MPI 5.0.
  * OMPIO is now the default for MPI-IO on all filesystems, including
    Lustre (prior to this, ROMIO was the default for Lustre).  Many
    thanks to Mark Dixon for identifying MPI I/O issues and providing
    access to Lustre systems for testing.
  * Minor MPI one-sided RDMA performance improvements.
  * Fix hcoll MPI_SCATTERV with MPI_IN_PLACE.
  * Add AVX support for MPI collectives.
  * Updates to mpirun(1) about "slots" and PE=x values.
  * Fix buffer allocation for large environment variables.  Thanks to
    @zrss for reporting the issue.
  * Upgrade the embedded OpenPMIx to v3.2.2.
  * Fix issue with extra-long values in MCA files.  Thanks to GitHub
    user @zrss for bringing the issue to our attention.
  * UCX: Fix zero-sized datatype transfers.
  * Fix --cpu-list for non-uniform modes.
  * Fix issue in PMIx callback caused by missing memory barrier on Arm platforms.
  * OFI MTL: Various bug fixes.
  * Fixed issue where MPI_TYPE_CREATE_RESIZED would create a datatype
    with unexpected extent on oddly-aligned datatypes.
  * collectives: Adjust default tuning thresholds for many collective
    algorithms
  * runtime: fix situation where rank-by argument does not work
  * Portals4: Clean up error handling corner cases
  * runtime: Remove --enable-install-libpmix option, which has not
    worked since it was added

OBS-URL: https://build.opensuse.org/request/show/882166
OBS-URL: https://build.opensuse.org/package/show/science:HPC/openmpi4?expand=0&rev=12
2021-03-30 13:09:12 +00:00
Dominique Leuenberger
676b548c69 Accepting request 839582 from science:HPC
OBS-URL: https://build.opensuse.org/request/show/839582
OBS-URL: https://build.opensuse.org/package/show/openSUSE:Factory/openmpi4?expand=0&rev=4
2020-10-05 17:42:27 +00:00
Nicolas Morey-Chaisemartin
7ca901bfb5 Accepting request 839573 from home:NMoreyChaisemartin:branches:science:HPC
- Update to version 4.0.5
  - See NEWS for the detailled changelog

OBS-URL: https://build.opensuse.org/request/show/839573
OBS-URL: https://build.opensuse.org/package/show/science:HPC/openmpi4?expand=0&rev=10
2020-10-05 13:29:47 +00:00
Dominique Leuenberger
ea6601a23a Accepting request 814028 from science:HPC
OBS-URL: https://build.opensuse.org/request/show/814028
OBS-URL: https://build.opensuse.org/package/show/openSUSE:Factory/openmpi4?expand=0&rev=3
2020-06-12 19:42:28 +00:00
Nicolas Morey-Chaisemartin
4fc4defb9c Accepting request 814027 from home:NMoreyChaisemartin:branches:science:HPC
- Update to version 4.0.4
  - See NEWS for the detailled changelog

OBS-URL: https://build.opensuse.org/request/show/814027
OBS-URL: https://build.opensuse.org/package/show/science:HPC/openmpi4?expand=0&rev=8
2020-06-11 21:09:09 +00:00
Dominique Leuenberger
749ec1d035 Accepting request 812864 from science:HPC
OBS-URL: https://build.opensuse.org/request/show/812864
OBS-URL: https://build.opensuse.org/package/show/openSUSE:Factory/openmpi4?expand=0&rev=2
2020-06-09 22:51:20 +00:00
Nicolas Morey-Chaisemartin
c9d49688b2 Accepting request 812863 from home:NMoreyChaisemartin:branches:science:HPC
- Update to version 4.0.3
  - See NEWS for the detailled changelog
  - Fixes compilation with UCX 1.8
- Drop memory-patcher-fix-compiler-warning.patch which was merged upstream

OBS-URL: https://build.opensuse.org/request/show/812863
OBS-URL: https://build.opensuse.org/package/show/science:HPC/openmpi4?expand=0&rev=6
2020-06-09 10:34:00 +00:00
Dominique Leuenberger
0e3beee944 Accepting request 786504 from science:HPC
Add openmpi4 package

OBS-URL: https://build.opensuse.org/request/show/786504
OBS-URL: https://build.opensuse.org/package/show/openSUSE:Factory/openmpi4?expand=0&rev=1
2020-03-20 22:56:01 +00:00
Nicolas Morey-Chaisemartin
57c526deae Remove unused extra macro file
OBS-URL: https://build.opensuse.org/package/show/science:HPC/openmpi4?expand=0&rev=4
2020-03-19 15:25:13 +00:00
Nicolas Morey-Chaisemartin
4c599c6422 Drop unexpected macro file
OBS-URL: https://build.opensuse.org/package/show/science:HPC/openmpi4?expand=0&rev=3
2020-03-19 09:11:35 +00:00
Nicolas Morey-Chaisemartin
b2e374890c Accepting request 786347 from home:NMoreyChaisemartin:branches:science:HPC
- Drop different package string between SLES and Leap

OBS-URL: https://build.opensuse.org/request/show/786347
OBS-URL: https://build.opensuse.org/package/show/science:HPC/openmpi4?expand=0&rev=2
2020-03-19 08:44:08 +00:00
Nicolas Morey-Chaisemartin
2a914cad07 Accepting request 764679 from home:NMoreyChaisemartin:branches:science:HPC
Add openmpi4

OBS-URL: https://build.opensuse.org/request/show/764679
OBS-URL: https://build.opensuse.org/package/show/science:HPC/openmpi4?expand=0&rev=1
2020-01-15 13:55:39 +00:00