Accepting request 796601 from home:badshah400:GW

New package: Core library to analyze gravitational-wave data

First in a series of package submissions for gravitational wave analysis.

OBS-URL: https://build.opensuse.org/request/show/796601
OBS-URL: https://build.opensuse.org/package/show/science/python-PyCBC?expand=0&rev=1
This commit is contained in:
2020-05-03 12:10:05 +00:00
committed by Git OBS Bridge
commit 96ac13eb01
5 changed files with 161 additions and 0 deletions

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version https://git-lfs.github.com/spec/v1
oid sha256:6cc1e3c419b893fd54faeefbbca1398a547d527ae0a933e2ba61457018cad639
size 3150499

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-------------------------------------------------------------------
Thu Apr 23 15:50:06 UTC 2020 - Atri Bhattacharya <badshah400@gmail.com>
- Update to version 1.15.6:
* More functionality for the multi-detector workflow
* A patch to the PSD variation is added to avoid time around
autogated periods is not strongly upranked.
* Steady improvements to the inference toolkit.
-------------------------------------------------------------------
Mon Feb 3 16:48:32 UTC 2020 - Atri Bhattacharya <badshah400@gmail.com>
- Update min required version of numpy to 1.16.0 for
BuildRequires.
-------------------------------------------------------------------
Mon Feb 3 16:41:10 UTC 2020 - Atri Bhattacharya <badshah400@gmail.com>
- Update to version 1.15.4
* Workflow code can now run on python3
* Inference data reading interface is now standardized
* XML segment files can be provided as input in workflow
generation
* Some patches have been applied for PyCBC Live.
- Fix env based hashbangs for exec in bindir; remove the hashbangs
for non-bindir files.
- Drop python-PyCBC-work-with-latest-numpy.patch: no longer needed
as python-numpy >= 1.16.0 is now supported by default.
- Package binaries only for python3 version.
-------------------------------------------------------------------
Mon Jul 22 11:01:38 UTC 2019 - Atri Bhattacharya <badshah400@gmail.com>
- Update to version 1.14.1:
* Bug fixed: issues with the dqsegdb integration in the new
dq.py module.
- Changes from version 1.14.0:
* Beta support for python3 (not enabled on openSUSE builds)
* Development towards a multi-ifo offline search code
* Numerous improvements in other code modules
- Add python-PyCBC-work-with-latest-numpy.patch to avoid checking
for max supported numpy version for python2 to get it building
on openSUSE >= 1550 where the current python2-numpy version is
1.16.x.
- Drop no longer needed sed commands.
-------------------------------------------------------------------
Thu Feb 7 15:10:46 UTC 2019 - badshah400@gmail.com
- Add python-numpy Requires.
-------------------------------------------------------------------
Thu Jan 31 13:37:31 UTC 2019 - badshah400@gmail.com
- Initial package.

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#
# spec file for package python-PyCBC
#
# Copyright (c) 2019 SUSE LINUX GmbH, Nuernberg, Germany.
#
# All modifications and additions to the file contributed by third parties
# remain the property of their copyright owners, unless otherwise agreed
# upon. The license for this file, and modifications and additions to the
# file, is the same license as for the pristine package itself (unless the
# license for the pristine package is not an Open Source License, in which
# case the license is the MIT License). An "Open Source License" is a
# license that conforms to the Open Source Definition (Version 1.9)
# published by the Open Source Initiative.
# Please submit bugfixes or comments via http://bugs.opensuse.org/
Name: python-PyCBC
Version: 1.15.6
Release: 0
License: GPL-3.0-or-later
Summary: Core library to analyze gravitational-wave data
Url: http://www.pycbc.org/
Group: Development/Languages/Python
Source: https://files.pythonhosted.org/packages/source/p/pycbc/PyCBC-%{version}.tar.gz
BuildRequires: gcc-c++
BuildRequires: python-rpm-macros
BuildRequires: %{python_module devel}
BuildRequires: %{python_module Cython}
BuildRequires: %{python_module setuptools}
BuildRequires: fdupes
BuildRequires: %{python_module numpy >= 1.16.0}
BuildRequires: %{python_module numpy-devel >= 1.16.0}
Requires: python-numpy >= 1.16.0
%python_subpackages
%description
PyCBC is a software package used to explore astrophysical sources of
gravitational waves. It contains algorithms to analyze
gravitational-wave data from the LIGO and Virgo detectors, detect
coalescing compact binaries, and measure the astrophysical parameters
of detected sources.
%prep
%setup -q -n PyCBC-%{version}
# FOR REAL BINARIES SET HASHBANG TO PYTHON3 DIRECTLY
sed -E -i "1{s|^#\!\s*/usr/bin/env python|#\!/usr/bin/python3}|}" \
bin/pycbc_* \
bin/*/pycbc_*
# FOR FILES NOT INSTALLED TO BINDIR, REMOVE HASHBANGS
sed -E -i "1{/^#\!\s*\/usr\/bin/d}" \
pycbc/fft/fft_callback.py \
pycbc/filter/fotonfilter.py \
pycbc/psd/*.py \
pycbc/results/*.py
%build
%python_build
%install
%python_install
sed -E -i "1 s|^#\!\s*/usr/bin/env\s*bash|#\!/bin/bash|" %{buildroot}%{_bindir}/run_pycbc_inference
%python_expand chmod -x %{buildroot}%{$python_sitearch}/pycbc/results/static/js/fancybox/2.1.5/jquery.fancybox.js
%python_expand chmod -x %{buildroot}%{$python_sitearch}/pycbc/results/static/js/fancybox/2.1.5/jquery.fancybox.pack.js
%python_expand %fdupes %{buildroot}%{$python_sitearch}
%files %{python_files}
%python3_only %{_bindir}/*
%{python_sitearch}/*
%changelog