0a3cb48df0
- Update to 4.0.1.post1
* astropy.config
[gh#astropy/astropy#9975]
Fixed a bug where importing a development version of a package that
uses ``astropy`` configuration system can result in a
``~/.astropy/config/package..cfg`` file.
* astropy.coordinates
[gh#astropy/astropy#9815]
Fixed a bug where a vestigal trace of a frame class could persist in the
transformation graph even after the removal of all transformations involving
that frame class.
[gh#astropy/astropy#9815]
Fixed a bug with ``TransformGraph.remove_transform()`` when the "from" and
"to" frame classes are not explicitly specified.
[gh#astropy/astropy#9900]
Read-only longitudes can now be passed in to ``EarthLocation`` even if
they include angles outside of the range of -180 to 180 degrees.
[gh#astropy/astropy#9980]
```SkyCoord.radial_velocity_correction``` no longer raises an Exception
when space motion information is present on the SkyCoord.
* astropy.io
[gh#astropy/astropy#9866]
Fixed a bug that prevented the unified I/O infrastructure from working with
datasets that are represented by directories rather than files.
* astropy.io.ascii
[gh#astropy/astropy#9918]
Fixed a bug in the ``fast_reader`` C parsers incorrectly returning entries
of isolated positive/negative signs as ``float`` instead of ``str``.
[gh#astropy/astropy#9923]
Fixed a segmentation fault in the ``fast_reader`` C parsers when parsing an
invalid file with ``guess=True`` and the file contains inconsistent column
numbers in combination with a quoted field; e.g., ``"1 2\n 3 4 '5'"``.
[gh#astropy/astropy#9933]
Magnitude, decibel, and dex can now be stored in ``ecsv`` files.
* astropy.io.misc
[gh#astropy/astropy#9933]
Magnitude, decibel, and dex can now be stored in ``hdf5`` files.
[gh#astropy/astropy#9956, gh#astropy/astropy#9961]
Fixed serialization of polynomial models to include non default values of
domain and window values.
[gh#astropy/astropy#9950]
Fixed a bug which affected overwriting tables within ``hdf5`` files.
Overwriting an existing path with associated column meta data now also
overwrites the meta data associated with the table.
[gh#astropy/astropy#9983]
Fixed serialization of Time objects with location under time-1.0.0
ASDF schema.
* astropy.io.fits
[gh#astropy/astropy#9711, gh#astropy/astropy#9934]
Fix regression with ``GroupsHDU`` which needs to modify the header to handle
invalid headers, and fix accesing ``.data`` for empty HDU.
[gh#astropy/astropy#9711]
Fix ``fitsdiff`` when its arguments are directories that contain other
directories.
[gh#astropy/astropy#9958]
Fix writing noncontiguous data to a compressed HDU.
[gh#astropy/astropy#9978]
Added verification of ``disp`` (``TDISP``) keyword to ``fits.Column`` and
extended tests for ``TFORM`` and ``TDISP`` validation.
[gh#astropy/astropy#10012]
Fix checksum verification to process all HDUs instead of only the first one
because of the lazy loading feature.
[gh#astropy/astropy#10030]
Allow passing ``output_verify`` to ``.close`` when using the context manager.
[gh#astropy/astropy#10041]
Prevent instantiation of ``PrimaryHDU`` and ``ImageHDU`` with a scalar.
[gh#astropy/astropy#10069]
Fix column access by attribute with FITS_rec: columns with scaling or columns
from ASCII tables where not properly converted when accessed by attribute
name.
* astropy.io.misc
[gh#astropy/astropy#9933]
Magnitude, decibel, and dex can now be stored in ``hdf5`` files.
[gh#astropy/astropy#9956, gh#astropy/astropy#9961]
Fixed serialization of polynomial models to include non default values of
domain and window values.
[gh#astropy/astropy#9950]
Fixed a bug which affected overwriting tables within ``hdf5`` files.
Overwriting an existing path with associated column meta data now also
overwrites the meta data associated with the table.
[gh#astropy/astropy#9983]
Fixed serialization of Time objects with location under time-1.0.0
ASDF schema.
* astropy.modeling
[gh#astropy/astropy#9987]
Fixed a bug in setting default values of parameters of orthonormal
polynomials when constructing a model set.
* astropy.table
[gh#astropy/astropy#9839]
Fixed bug in ``Table.reverse`` for tables that contain non-mutable mixin columns
(like ``SkyCoord``) for which in-place item update is not allowed.
[gh#astropy/astropy#9933]
Tables containing Magnitude, decibel, and dex columns can now be saved to
``ecsv`` files.
[gh#astropy/astropy#10027]
Fixed bug where adding or inserting a row fails on a table with an index
defined on a column that is not the first one.
[gh#astropy/astropy#10068]
Ensured that ``table.show_in_browser`` also worked for mixin columns like
``Time`` and ``SkyCoord``.
* astropy.time
[gh#astropy/astropy#9679]
Fix inaccuracy when converting between TimeDelta and datetime.timedelta.
[gh#astropy/astropy#9812]
Fixed exception when changing ``format`` in the case when ``out_subfmt`` is
defined and is incompatible with the new format.
[gh#astropy/astropy#9812]
Fixed exceptions in ``Time.to_value()``: when supplying any ``subfmt`` argument
for string-based formats like 'iso', and for ``subfmt='long'`` for the formats
'byear', 'jyear', and 'decimalyear'.
[gh#astropy/astropy#9969]
Fixed bug where the location attribute was lost when creating a new ``Time``
object from an existing ``Time`` or list of ``Time`` objects.
[gh#astropy/astropy#10034]
Fixed a bug where an exception occurred when creating a ``Time`` object
if the ``val1`` argument was a regular double and the ``val2`` argument
was a ``longdouble``.
* astropy.timeseries
[gh#astropy/astropy#10013]
Fixed issue with reference time for the ``transit_time`` parameter returned by
the ``BoxLeastSquares`` periodogram. Now, the ``transit_time`` will be within
the range of the input data and arbitrary time offsets/zero points no longer
affect results.
* astropy.units
[gh#astropy/astropy#9948]
Fix for ``quantity_input`` annotation raising an exception on iterable
types that don't define a general ``__contains__`` for checking if ``None``
is contained (e.g. Enum as of python3.8), by instead checking for instance of
Sequence.
[gh#astropy/astropy#10066]
Fix for ``u.Quantity`` not taking into account ``ndmin`` if constructed from
another ``u.Quantity`` instance with different but convertible unit
* astropy.utils
[gh#astropy/astropy#9981]
Fixed ``deprecated_renamed_argument`` not passing in user value to
deprecated keyword when the keyword has no new name.
[gh#astropy/astropy#9985]
Fixed ``deprecated_renamed_argument`` not issuing a deprecation warning when
deprecated keyword without new name is passed in as positional argument.
[gh#astropy/astropy#10007]
Fixed detection of read-only filesystems in the caching code.
* astropy.visualization
[gh#astropy/astropy#9848]
Fixed bug from matplotlib >=3.1 where an empty Quantity array is
sent for unit conversion as an empty list.
[gh#astropy/astropy#9913]
Fix bug in ``ZScaleInterval`` to return the array minimum and
maximum when there are less then ``min_npixels`` in the input array.
[gh#astropy/astropy#8004, gh#astropy/astropy#9991]
Fix a bug in simplifying axis labels that affected non-rectangular frames.
* Increase minimum asdf version to 2.5.2.
[gh#astropy/astropy#9996, gh#astropy/astropy#9819]
* Updated wcslib to v7.2. [gh#astropy/astropy#10021]
- updated test requirements and recommends
- run pytest directly
OBS-URL: https://build.opensuse.org/request/show/795557
OBS-URL: https://build.opensuse.org/package/show/devel:languages:python:numeric/python-astropy?expand=0&rev=23
164 lines
6.4 KiB
RPMSpec
164 lines
6.4 KiB
RPMSpec
#
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# spec file for package python-astropy
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#
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# Copyright (c) 2020 SUSE LLC
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#
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# All modifications and additions to the file contributed by third parties
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# remain the property of their copyright owners, unless otherwise agreed
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# upon. The license for this file, and modifications and additions to the
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# file, is the same license as for the pristine package itself (unless the
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# license for the pristine package is not an Open Source License, in which
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# case the license is the MIT License). An "Open Source License" is a
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# license that conforms to the Open Source Definition (Version 1.9)
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# published by the Open Source Initiative.
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# Please submit bugfixes or comments via https://bugs.opensuse.org/
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#
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%{?!python_module:%define python_module() python-%{**} python3-%{**}}
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%define skip_python2 1
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Name: python-astropy
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Version: 4.0.1.post1
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Release: 0
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Summary: Community-developed python astronomy tools
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License: BSD-3-Clause
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URL: https://astropy.org
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Source: https://files.pythonhosted.org/packages/source/a/astropy/astropy-%{version}.tar.gz
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# Mark wcs headers as false positives for devel-file-in-non-devel-package
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# These are used by the python files so they must be available.
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Source100: python-astropy-rpmlintrc
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BuildRequires: %{python_module Cython >= 0.21}
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BuildRequires: %{python_module astropy-helpers}
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BuildRequires: %{python_module devel}
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BuildRequires: %{python_module numpy-devel >= 1.16}
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BuildRequires: %{python_module ply}
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BuildRequires: %{python_module setuptools}
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BuildRequires: fdupes
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BuildRequires: hdf5-devel
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BuildRequires: libxml2-tools
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BuildRequires: pkgconfig
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BuildRequires: python-rpm-macros
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BuildRequires: pkgconfig(cfitsio)
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BuildRequires: pkgconfig(erfa) >= 1.7.0
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BuildRequires: pkgconfig(expat)
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BuildRequires: pkgconfig(wcslib)
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Requires: hdf5
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Requires: liberfa1 >= 1.7.0
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Requires: python-dbm
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Requires: python-matplotlib >= 2.1
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Requires: python-numpy >= 1.7.0
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Recommends: libxml2-tools
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Recommends: python-Jinja2
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Recommends: python-PyYAML
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Recommends: python-asdf >= 2.5
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Recommends: python-beautifulsoup4
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Recommends: python-Bottleneck
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Recommends: python-bleach
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Recommends: python-h5py
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Recommends: python-ipython
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Recommends: python-jplephem
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Recommends: python-matplotlib >= 2.1
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Recommends: python-pandas
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Recommends: python-scikit-image
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Recommends: python-scipy >= 0.18
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Conflicts: perl-Data-ShowTable
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# SECTION Optional requirements
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BuildRequires: %{python_module Bottleneck}
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BuildRequires: %{python_module Jinja2}
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BuildRequires: %{python_module PyYAML}
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BuildRequires: %{python_module asdf >= 2.5}
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BuildRequires: %{python_module beautifulsoup4}
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BuildRequires: %{python_module bleach}
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BuildRequires: %{python_module h5py}
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BuildRequires: %{python_module ipython}
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BuildRequires: %{python_module jplephem}
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BuildRequires: %{python_module matplotlib >= 2.1}
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BuildRequires: %{python_module pandas}
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BuildRequires: %{python_module scikit-image}
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BuildRequires: %{python_module scipy >= 0.18}
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# /SECTION
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# SECTION test requirements
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BuildRequires: %{python_module mpmath}
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BuildRequires: %{python_module objgraph}
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BuildRequires: %{python_module pytest >= 3.1}
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BuildRequires: %{python_module pytest-astropy}
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BuildRequires: %{python_module pytest-doctestplus}
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BuildRequires: %{python_module pytest-mpl}
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# /SECTION
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%python_subpackages
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%description
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Astropy is a package intended to contain core functionality and some
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common tools needed for performing astronomy and astrophysics research with
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Python. It also provides an index for other astronomy packages and tools for
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managing them.
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%prep
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%setup -q -n astropy-%{version}
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# Make sure bundled libs are not used
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rm -rf cextern/expat
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rm -rf cextern/erfa
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rm -rf cextern/cfitsio
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rm -rf cextern/wcslib
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echo "[build]" >> setup.cfg
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echo "use_system_libraries=1" >> setup.cfg
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%build
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%python_build --use-system-libraries --offline
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%install
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%python_install --use-system-libraries --offline
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chmod a-x %{buildroot}%{python_sitearch}/astropy/wcs/tests/data/header_with_time.fits
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# Deduplicating files can generate a RPMLINT warning for pyc mtime
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%{python_expand %fdupes %{buildroot}%{$python_sitearch}
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rm -rf %{buildroot}%{$python_sitearch}/astropy/io/misc/tests/__pycache__/__init__.*.pyc
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rm -rf %{buildroot}%{$python_sitearch}/astropy/io/votable/tests/__pycache__/*_test.*.pyc
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rm -rf %{buildroot}%{$python_sitearch}/astropy/io/votable/tests/__pycache__/__init__.*.pyc
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rm -rf %{buildroot}%{$python_sitearch}/astropy/wcs/tests/__pycache__/__init__.*.pyc
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rm -rf %{buildroot}%{$python_sitearch}/astropy/wcs/tests/extension/__pycache__/__init__.*.pyc
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$python -m compileall -d %{$python_sitearch} %{buildroot}%{$python_sitearch}/astropy/io/misc/tests/
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$python -O -m compileall -d %{$python_sitearch} %{buildroot}%{$python_sitearch}/astropy/io/misc/tests/
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$python -m compileall -d %{$python_sitearch} %{buildroot}%{$python_sitearch}/astropy/io/votable/tests/
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$python -O -m compileall -d %{$python_sitearch} %{buildroot}%{$python_sitearch}/astropy/io/votable/tests/
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$python -m compileall -d %{$python_sitearch} %{buildroot}%{$python_sitearch}/astropy/stats/bls/tests/
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$python -O -m compileall -d %{$python_sitearch} %{buildroot}%{$python_sitearch}/astropy/stats/bls/tests/
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$python -m compileall -d %{$python_sitearch} %{buildroot}%{$python_sitearch}/astropy/wcs/tests/
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$python -O -m compileall -d %{$python_sitearch} %{buildroot}%{$python_sitearch}/astropy/wcs/tests/
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%fdupes %{buildroot}%{$python_sitearch}
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}
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%check
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export PYTHONDONTWRITEBYTECODE=1
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# http://docs.astropy.org/en/latest/development/testguide.html#running-tests
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%python_exec setup.py build_ext --inplace --offline
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%ifarch aarch64
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# doctest failure because of precision errors
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%define skippytest -k 'not bayesian_info_criterion_lsq'
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%endif
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%{pytest_arch -W "ignore:the imp module is deprecated:DeprecationWarning" \
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-W "ignore:Unknown pytest.mark.openfiles_ignore:pytest.PytestUnknownMarkWarning" \
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--ignore "docs/whatsnew" %{?skippytest}
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}
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%files %{python_files}
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%doc CHANGES.rst README.rst
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%license licenses/*
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%python3_only %{_bindir}/fitsdiff
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%python3_only %{_bindir}/fitsheader
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%python3_only %{_bindir}/fitscheck
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%python3_only %{_bindir}/fitsinfo
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%python3_only %{_bindir}/fits2bitmap
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%python3_only %{_bindir}/samp_hub
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%python3_only %{_bindir}/showtable
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%python3_only %{_bindir}/volint
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%python3_only %{_bindir}/wcslint
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%{python_sitearch}/astropy/
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%{python_sitearch}/astropy-%{version}-py*.egg-info
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%changelog
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