82ad95d973
:test flavor is currently failing but undetected! - actually detect unit test failures with sys.exit(astropy.tests()) - do not fail on DeprecationWarnings - support updated system lib wcslib 7.3 with astropy-pr10433-wcslib73-tests.patch gh#astropy/astropy#10433 astropy-pr10440-wcs-datfix.patch gh#astropy/astropy#10440 - clean up blank lines after pytest report and prevent possible failure of tests depending on test order astropy-pr10545-remove-newline-3d_cd_hdr.patch gh#astropy/astropy#10545 OBS-URL: https://build.opensuse.org/request/show/821523 OBS-URL: https://build.opensuse.org/package/show/devel:languages:python:numeric/python-astropy?expand=0&rev=32
190 lines
7.4 KiB
RPMSpec
190 lines
7.4 KiB
RPMSpec
#
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# spec file for package python-astropy
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#
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# Copyright (c) 2020 SUSE LLC
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#
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# All modifications and additions to the file contributed by third parties
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# remain the property of their copyright owners, unless otherwise agreed
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# upon. The license for this file, and modifications and additions to the
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# file, is the same license as for the pristine package itself (unless the
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# license for the pristine package is not an Open Source License, in which
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# case the license is the MIT License). An "Open Source License" is a
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# license that conforms to the Open Source Definition (Version 1.9)
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# published by the Open Source Initiative.
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# Please submit bugfixes or comments via https://bugs.opensuse.org/
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#
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%{?!python_module:%define python_module() python-%{**} python3-%{**}}
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%global flavor @BUILD_FLAVOR@%{nil}
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%if "%{flavor}" == "test"
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%define psuffix -test
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%bcond_without test
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%else
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%define psuffix %{nil}
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%bcond_with test
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%endif
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%define binaries fitsdiff fitsheader fitscheck fitsinfo fits2bitmap samp_hub showtable volint wcslint
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%define skip_python2 1
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Name: python-astropy
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Version: 4.0.1.post1
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Release: 0
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Summary: Community-developed python astronomy tools
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License: BSD-3-Clause
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URL: https://astropy.org
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Source: https://files.pythonhosted.org/packages/source/a/astropy/astropy-%{version}.tar.gz
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# PATCH-FIX-UPSTREAM astropy-pr10433-wcslib73-tests.patch gh#astropy/astropy#10433 -- allow system wcslib 7.3
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Patch0: astropy-pr10433-wcslib73-tests.patch
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# PATCH-FIX-UPSTREAM astropy-pr10440-wcs-datfix.patch gh#astropy/astropy#10440 -- allow system wcslib 7.3
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Patch1: astropy-pr10440-wcs-datfix.patch
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# PATCH-FIX-UPSTREAM astropy-pr10545-remove-newline-3d_cd_hdr.patch gh#astropy/astropy#10545 -- clean up newlines after pytest output
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Patch2: astropy-pr10545-remove-newline-3d_cd_hdr.patch
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# Mark wcs headers as false positives for devel-file-in-non-devel-package
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# These are used by the python files so they must be available.
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Source100: python-astropy-rpmlintrc
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BuildRequires: %{python_module Cython >= 0.21}
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BuildRequires: %{python_module astropy-helpers}
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BuildRequires: %{python_module devel}
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BuildRequires: %{python_module numpy-devel >= 1.16}
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BuildRequires: %{python_module ply}
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BuildRequires: %{python_module setuptools}
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BuildRequires: fdupes
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BuildRequires: hdf5-devel
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BuildRequires: libxml2-tools
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BuildRequires: pkgconfig
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BuildRequires: python-rpm-macros
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BuildRequires: pkgconfig(cfitsio)
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BuildRequires: pkgconfig(erfa) >= 1.7.0
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BuildRequires: pkgconfig(expat)
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BuildRequires: pkgconfig(wcslib)
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Requires: hdf5
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Requires: liberfa1 >= 1.7.0
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Requires: python-dbm
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Requires: python-matplotlib >= 2.1
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Requires: python-numpy >= 1.7.0
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Requires(post): update-alternatives
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Requires(postun): update-alternatives
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Recommends: libxml2-tools
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Recommends: python-Bottleneck
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Recommends: python-Jinja2
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Recommends: python-PyYAML
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Recommends: python-asdf >= 2.5
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Recommends: python-beautifulsoup4
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Recommends: python-bleach
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Recommends: python-h5py
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Recommends: python-ipython
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Recommends: python-jplephem
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Recommends: python-matplotlib >= 2.1
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Recommends: python-pandas
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Recommends: python-scikit-image
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Recommends: python-scipy >= 0.18
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Conflicts: perl-Data-ShowTable
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%if %{with test}
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# SECTION Optional requirements
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BuildRequires: %{python_module Bottleneck}
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BuildRequires: %{python_module Jinja2}
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BuildRequires: %{python_module PyYAML}
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BuildRequires: %{python_module asdf >= 2.5}
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BuildRequires: %{python_module astropy}
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BuildRequires: %{python_module beautifulsoup4}
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BuildRequires: %{python_module bleach}
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BuildRequires: %{python_module h5py}
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BuildRequires: %{python_module ipython}
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BuildRequires: %{python_module jplephem}
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BuildRequires: %{python_module matplotlib >= 2.1}
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BuildRequires: %{python_module pandas}
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BuildRequires: %{python_module scikit-image}
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BuildRequires: %{python_module scipy >= 0.18}
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# /SECTION
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# SECTION test requirements
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BuildRequires: %{python_module mpmath}
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BuildRequires: %{python_module objgraph}
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BuildRequires: %{python_module pytest >= 3.1}
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BuildRequires: %{python_module pytest-astropy}
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BuildRequires: %{python_module pytest-doctestplus >= 0.6}
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BuildRequires: %{python_module pytest-mpl}
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# /SECTION
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%endif
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%python_subpackages
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%description
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Astropy is a package intended to contain core functionality and some
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common tools needed for performing astronomy and astrophysics research with
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Python. It also provides an index for other astronomy packages and tools for
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managing them.
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%if !%{with test}
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%prep
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%setup -q -n astropy-%{version}
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%autopatch -p1
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# Disable test failure on DeprecationWarnings
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sed -i "/enable_deprecations_as_exceptions(/,/)/ d" astropy/conftest.py
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# Make sure bundled libs are not used
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rm -rf cextern/expat
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rm -rf cextern/erfa
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rm -rf cextern/cfitsio
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rm -rf cextern/wcslib
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echo "[build]" >> setup.cfg
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echo "use_system_libraries=1" >> setup.cfg
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%build
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%python_build --use-system-libraries --offline
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%install
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%python_install --use-system-libraries --offline
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for b in %{binaries}; do
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%python_clone -a %{buildroot}%{_bindir}/$b
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done
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chmod a-x %{buildroot}%{python_sitearch}/astropy/wcs/tests/data/header_with_time.fits
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# Deduplicating files can generate a RPMLINT warning for pyc mtime
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%{python_expand %fdupes %{buildroot}%{$python_sitearch}
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rm -rf %{buildroot}%{$python_sitearch}/astropy/io/misc/tests/__pycache__/__init__.*.pyc
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rm -rf %{buildroot}%{$python_sitearch}/astropy/io/votable/tests/__pycache__/*_test.*.pyc
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rm -rf %{buildroot}%{$python_sitearch}/astropy/io/votable/tests/__pycache__/__init__.*.pyc
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rm -rf %{buildroot}%{$python_sitearch}/astropy/wcs/tests/__pycache__/__init__.*.pyc
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rm -rf %{buildroot}%{$python_sitearch}/astropy/wcs/tests/extension/__pycache__/__init__.*.pyc
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$python -m compileall -d %{$python_sitearch} %{buildroot}%{$python_sitearch}/astropy/io/misc/tests/
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$python -O -m compileall -d %{$python_sitearch} %{buildroot}%{$python_sitearch}/astropy/io/misc/tests/
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$python -m compileall -d %{$python_sitearch} %{buildroot}%{$python_sitearch}/astropy/io/votable/tests/
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$python -O -m compileall -d %{$python_sitearch} %{buildroot}%{$python_sitearch}/astropy/io/votable/tests/
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$python -m compileall -d %{$python_sitearch} %{buildroot}%{$python_sitearch}/astropy/stats/bls/tests/
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$python -O -m compileall -d %{$python_sitearch} %{buildroot}%{$python_sitearch}/astropy/stats/bls/tests/
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$python -m compileall -d %{$python_sitearch} %{buildroot}%{$python_sitearch}/astropy/wcs/tests/
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$python -O -m compileall -d %{$python_sitearch} %{buildroot}%{$python_sitearch}/astropy/wcs/tests/
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%fdupes %{buildroot}%{$python_sitearch}
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}
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%endif
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%if %{with test}
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%check
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%ifarch aarch64
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# doctest failure because of precision errors
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%define skip_pytest -k 'not bayesian_info_criterion_lsq'
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%endif
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# http://docs.astropy.org/en/latest/development/testguide.html#running-tests
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# running pytest directly would require building the extensions inplace
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%python_exec -B -c "import astropy, sys; sys.exit(astropy.test(args=\"-v %{?skip_pytest}\"))"
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%endif
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%if !%{with test}
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%post
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%{expand:%(for b in %{binaries}; do echo "%%python_install_alternative $b"; done)}
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%postun
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%{expand:%(for b in %{binaries}; do echo "%%python_uninstall_alternative $b"; done)}
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%files %{python_files}
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%doc CHANGES.rst README.rst
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%license licenses/*
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%{expand:%(for b in %{binaries}; do echo "%%python_alternative %%{_bindir}/$b"; done)}
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%{python_sitearch}/astropy/
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%{python_sitearch}/astropy-%{version}-py*.egg-info
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%endif
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%changelog
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