diff --git a/biopython-1.83.tar.gz b/biopython-1.83.tar.gz deleted file mode 100644 index 636d1f5..0000000 --- a/biopython-1.83.tar.gz +++ /dev/null @@ -1,3 +0,0 @@ -version https://git-lfs.github.com/spec/v1 -oid sha256:78e6bfb78de63034037afd35fe77cb6e0a9e5b62706becf78a7d922b16ed83f7 -size 19431530 diff --git a/biopython-1.84.tar.gz b/biopython-1.84.tar.gz new file mode 100644 index 0000000..c4ee00f --- /dev/null +++ b/biopython-1.84.tar.gz @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:60fbe6f996e8a6866a42698c17e552127d99a9aab3259d6249fbaabd0e0cc7b4 +size 25793001 diff --git a/python-biopython.changes b/python-biopython.changes index 2e5a1a1..bf1764c 100644 --- a/python-biopython.changes +++ b/python-biopython.changes @@ -1,3 +1,21 @@ +------------------------------------------------------------------- +Thu Oct 10 15:36:36 UTC 2024 - Dirk Müller + +- update to 1.84: + * The old parser stores information in a + Bio.Blast.NCBIXML.Blast object, with attribute names based on + plain-text Blast output. The new parser stores information in + a Bio.Blast.Record object. This class follows the DTD that + describes the XML in terms of attribute names and dictionary + key names, class structure, and object types. This makes it + easier to find the detailed description of each field in the + NCBI Blast documentation. + * The old parser stores alignment information directly as seen + in the BLAST XML output, i.e. as strings with dashes to + represent gaps. The new parser stores the alignment + information as a Bio.Align.Alignment object, which can then + be used to e.g. print the alignment in a different format. + ------------------------------------------------------------------- Sat Jan 20 12:29:01 UTC 2024 - Dirk Müller diff --git a/python-biopython.spec b/python-biopython.spec index f42b854..5d72903 100644 --- a/python-biopython.spec +++ b/python-biopython.spec @@ -22,7 +22,7 @@ %define skip_python2 1 %define skip_python36 1 Name: python-biopython -Version: 1.83 +Version: 1.84 Release: 0 Summary: Python Tools for Computational Molecular Biology License: BSD-3-Clause AND MIT