Accepting request 1064736 from home:apersaud:branches:devel:languages:python:numeric

update to latest version

OBS-URL: https://build.opensuse.org/request/show/1064736
OBS-URL: https://build.opensuse.org/package/show/devel:languages:python:numeric/python-fastparquet?expand=0&rev=46
This commit is contained in:
Matej Cepl 2023-02-12 22:54:14 +00:00 committed by Git OBS Bridge
parent 8b4bcd5004
commit 42fa3a1c16
5 changed files with 26 additions and 190 deletions

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@ -1,3 +0,0 @@
version https://git-lfs.github.com/spec/v1
oid sha256:8e098493e2e87f8e004c3fc9b4e94ef57df9d7656fd8aa1a5626b6e6f3ff2b8e
size 28903475

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@ -0,0 +1,3 @@
version https://git-lfs.github.com/spec/v1
oid sha256:6224c7fda7d900e4334b339c4376b58ad2c27892fe7faa67ae28c380100fbe24
size 28902717

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@ -1,183 +0,0 @@
From f035a2d7b37e2cbdef1a99bc6130be7e4afcf35f Mon Sep 17 00:00:00 2001
From: Martin Durant <martin.durant@alumni.utoronto.ca>
Date: Thu, 22 Dec 2022 12:57:32 -0500
Subject: [PATCH 1/5] more print
---
fastparquet/cencoding.pyx | 5 +++++
1 file changed, 5 insertions(+)
diff --git a/fastparquet/cencoding.pyx b/fastparquet/cencoding.pyx
index 4ab48be6..c151aff9 100644
--- a/fastparquet/cencoding.pyx
+++ b/fastparquet/cencoding.pyx
@@ -225,6 +225,7 @@ cdef void delta_read_bitpacked(NumpyIO file_obj, uint8_t bitwidth,
stop += 8
else:
o.write_int((data >> stop) & mask)
+ print("bitpack value", (data >> stop) & mask, data, stop, mask)
stop -= bitwidth
count -= 1
@@ -239,11 +240,13 @@ cpdef void delta_binary_unpack(NumpyIO file_obj, NumpyIO o):
const uint8_t[:] bitwidths
uint8_t bitwidth
values_per_miniblock = block_size // miniblock_per_block
+ print("\nstart", count, value, values_per_miniblock)
while True:
min_delta = zigzag_long(read_unsigned_var_int(file_obj))
bitwidths = file_obj.read(miniblock_per_block)
for i in range(miniblock_per_block):
bitwidth = bitwidths[i]
+ print("\n miniblock", i, "width", bitwidth)
if bitwidth:
temp = o.loc
if count > 1:
@@ -253,6 +256,7 @@ cpdef void delta_binary_unpack(NumpyIO file_obj, NumpyIO o):
for j in range(values_per_miniblock):
temp = o.read_int()
o.loc -= 4
+ print("miniblock value", value)
o.write_int(value)
value += min_delta + temp
count -= 1
@@ -260,6 +264,7 @@ cpdef void delta_binary_unpack(NumpyIO file_obj, NumpyIO o):
return
else:
for j in range(values_per_miniblock):
+ print("miniblock value", value)
o.write_int(value)
value += min_delta
count -= 1
From c453e140355055be1077f2c99b24785444b4ab20 Mon Sep 17 00:00:00 2001
From: Martin Durant <martin.durant@alumni.utoronto.ca>
Date: Thu, 22 Dec 2022 13:02:27 -0500
Subject: [PATCH 2/5] more
---
fastparquet/cencoding.pyx | 2 +-
1 file changed, 1 insertion(+), 1 deletion(-)
diff --git a/fastparquet/cencoding.pyx b/fastparquet/cencoding.pyx
index c151aff9..6c2051c6 100644
--- a/fastparquet/cencoding.pyx
+++ b/fastparquet/cencoding.pyx
@@ -256,7 +256,7 @@ cpdef void delta_binary_unpack(NumpyIO file_obj, NumpyIO o):
for j in range(values_per_miniblock):
temp = o.read_int()
o.loc -= 4
- print("miniblock value", value)
+ print("miniblock value (bw)", value)
o.write_int(value)
value += min_delta + temp
count -= 1
From 76b8c4fefe703d980b72ad37841bb2e76b9da590 Mon Sep 17 00:00:00 2001
From: Martin Durant <martin.durant@alumni.utoronto.ca>
Date: Thu, 22 Dec 2022 13:32:27 -0500
Subject: [PATCH 3/5] more
---
fastparquet/cencoding.pyx | 1 +
1 file changed, 1 insertion(+)
diff --git a/fastparquet/cencoding.pyx b/fastparquet/cencoding.pyx
index 6c2051c6..9335b52a 100644
--- a/fastparquet/cencoding.pyx
+++ b/fastparquet/cencoding.pyx
@@ -223,6 +223,7 @@ cdef void delta_read_bitpacked(NumpyIO file_obj, uint8_t bitwidth,
if stop < 0:
data = ((data & 0X00FFFFFFFFFFFFFF) << 8) | file_obj.read_byte()
stop += 8
+ print("bin stop", bin(stop), bin(data))
else:
o.write_int((data >> stop) & mask)
print("bitpack value", (data >> stop) & mask, data, stop, mask)
From bbb32d8ea7f2cb97a817a22c0357f1a023f79b42 Mon Sep 17 00:00:00 2001
From: Martin Durant <martin.durant@alumni.utoronto.ca>
Date: Thu, 22 Dec 2022 13:39:14 -0500
Subject: [PATCH 4/5] trial
---
fastparquet/cencoding.pyx | 4 ++--
1 file changed, 2 insertions(+), 2 deletions(-)
diff --git a/fastparquet/cencoding.pyx b/fastparquet/cencoding.pyx
index 9335b52a..1be0a001 100644
--- a/fastparquet/cencoding.pyx
+++ b/fastparquet/cencoding.pyx
@@ -18,7 +18,7 @@ cdef extern from "string.h":
from cpython cimport (
PyBytes_FromStringAndSize, PyBytes_GET_SIZE, PyUnicode_DecodeUTF8,
)
-from libc.stdint cimport uint8_t, uint32_t, int32_t, uint64_t, int64_t
+from libc.stdint cimport int8_t, uint8_t, uint32_t, int32_t, uint64_t, int64_t
cpdef void read_rle(NumpyIO file_obj, int32_t header, int32_t bit_width, NumpyIO o, int32_t itemsize=4):
@@ -217,7 +217,7 @@ cdef void delta_read_bitpacked(NumpyIO file_obj, uint8_t bitwidth,
NumpyIO o, uint64_t count, uint8_t itemsize=4):
cdef:
uint64_t data = 0
- char stop = -bitwidth
+ int8_t stop = -bitwidth
uint64_t mask = 0XFFFFFFFFFFFFFFFF >> (64 - bitwidth)
while count > 0:
if stop < 0:
From 43e34e28b2e108f178b05bba8c109e2b131f5fc2 Mon Sep 17 00:00:00 2001
From: Martin Durant <martin.durant@alumni.utoronto.ca>
Date: Thu, 22 Dec 2022 13:43:11 -0500
Subject: [PATCH 5/5] fix
---
fastparquet/cencoding.pyx | 6 ------
1 file changed, 6 deletions(-)
diff --git a/fastparquet/cencoding.pyx b/fastparquet/cencoding.pyx
index 1be0a001..90ba15db 100644
--- a/fastparquet/cencoding.pyx
+++ b/fastparquet/cencoding.pyx
@@ -223,10 +223,8 @@ cdef void delta_read_bitpacked(NumpyIO file_obj, uint8_t bitwidth,
if stop < 0:
data = ((data & 0X00FFFFFFFFFFFFFF) << 8) | file_obj.read_byte()
stop += 8
- print("bin stop", bin(stop), bin(data))
else:
o.write_int((data >> stop) & mask)
- print("bitpack value", (data >> stop) & mask, data, stop, mask)
stop -= bitwidth
count -= 1
@@ -241,13 +239,11 @@ cpdef void delta_binary_unpack(NumpyIO file_obj, NumpyIO o):
const uint8_t[:] bitwidths
uint8_t bitwidth
values_per_miniblock = block_size // miniblock_per_block
- print("\nstart", count, value, values_per_miniblock)
while True:
min_delta = zigzag_long(read_unsigned_var_int(file_obj))
bitwidths = file_obj.read(miniblock_per_block)
for i in range(miniblock_per_block):
bitwidth = bitwidths[i]
- print("\n miniblock", i, "width", bitwidth)
if bitwidth:
temp = o.loc
if count > 1:
@@ -257,7 +253,6 @@ cpdef void delta_binary_unpack(NumpyIO file_obj, NumpyIO o):
for j in range(values_per_miniblock):
temp = o.read_int()
o.loc -= 4
- print("miniblock value (bw)", value)
o.write_int(value)
value += min_delta + temp
count -= 1
@@ -265,7 +260,6 @@ cpdef void delta_binary_unpack(NumpyIO file_obj, NumpyIO o):
return
else:
for j in range(values_per_miniblock):
- print("miniblock value", value)
o.write_int(value)
value += min_delta
count -= 1

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@ -1,3 +1,24 @@
-------------------------------------------------------------------
Thu Feb 9 15:55:08 UTC 2023 - Arun Persaud <arun@gmx.de>
- update to version 2023.2.0:
* revert one-level set of filters (#852)
* full size dict for decoding V2 pages (#850)
* infer_object_encoding fix (#847)
* row filtering with V2 pages (#845)
-------------------------------------------------------------------
Wed Feb 8 18:25:03 UTC 2023 - Arun Persaud <arun@gmx.de>
- specfile:
* remove fastparquet-pr835.patch, implemented upstream
- update to version 2023.1.0:
* big improvement to write speed
* paging support for bigger row-groups
* pandas 2.0 support
* delta for big-endian architecture
-------------------------------------------------------------------
Mon Jan 2 20:38:49 UTC 2023 - Ben Greiner <code@bnavigator.de>

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@ -17,16 +17,14 @@
Name: python-fastparquet
Version: 2022.12.0
Version: 2023.2.0
Release: 0
Summary: Python support for Parquet file format
License: Apache-2.0
URL: https://github.com/dask/fastparquet/
# Use GitHub archive, because it containts the test modules and data, requires setting version manuall for setuptools_scm
Source: https://github.com/dask/fastparquet/archive/%{version}.tar.gz#/fastparquet-%{version}.tar.gz
# PATCH-FIX-UPSTREAM fastparquet-pr835.patch gh#dask/fastparquet#835
Patch2: fastparquet-pr835.patch
BuildRequires: %{python_module Cython}
BuildRequires: %{python_module Cython >= 0.29.23}
BuildRequires: %{python_module base >= 3.8}
BuildRequires: %{python_module cramjam >= 2.3.0}
# version requirement not declared for runtime, but necessary for tests.