Accepting request 742268 from home:TheBlackCat:branches:devel:languages:python:numeric

Update to 0.46.0

OBS-URL: https://build.opensuse.org/request/show/742268
OBS-URL: https://build.opensuse.org/package/show/devel:languages:python:numeric/python-numba?expand=0&rev=26

fix-max-name-size.patch

@@ -0,0 +1,26 @@
+From 4e42221e368b4486be2ec8381f20382fc3609351 Mon Sep 17 00:00:00 2001
+From: Todd <toddrme2178@gmail.com>
+Date: Sat, 27 Jul 2019 18:29:47 -0400
+Subject: [PATCH] Set maximum name size to maximum allowable value
+
+Fix for #3876 without needing to patch LLVM.
+---
+ numba/__init__.py | 5 +++++
+ 1 file changed, 5 insertions(+)
+
+diff --git a/numba/__init__.py b/numba/__init__.py
+index c62ad06289..114e9a597e 100644
+--- a/numba/__init__.py
++++ b/numba/__init__.py
+@@ -102,6 +102,11 @@ def _ensure_llvm():
+                "Please update llvmlite." %
+                (_min_llvm_version + llvm_version_info))
+         raise ImportError(msg)
++    
++    try:
++        llvmlite.binding.set_option("tmp", "-non-global-value-max-name-size=4294967295")
++    except:
++        pass
+ 
+     check_jit_execution()
+ 

numba-0.45.1.tar.gz

@@ -1,3 +0,0 @@
-version https://git-lfs.github.com/spec/v1
-oid sha256:41376e8635fa43743ca7ff9b4fb503c0c3315a9243d523b5870207d6199bdfd9
-size 1782845

numba-0.46.0.tar.gz

@@ -0,0 +1,3 @@
+version https://git-lfs.github.com/spec/v1
+oid sha256:c2cbaeae60f80805290fff50175028726fae12692404a36babd3326730fbceee
+size 1851254

python-numba.changes

@@ -1,6 +1,18 @@
 -------------------------------------------------------------------
 Thu Sep 26 08:06:01 UTC 2019 - Tomáš Chvátal <tchvatal@suse.com>
 
+- Update to 0.46.0:
+  * Many fixes and changes for llvm/cuda updates
+    See CHANGE_LOG file for details
+- Add fix-max-name-size.patch to fix issue with numba
+  identifier length on recent LLVM versions.
+- Remove test from skip-failing-tests.patch fixed by
+  fix-max-name-size.patch.  The test is important, if it is failing
+  numba will not work reliably.
+
+-------------------------------------------------------------------
+Thu Sep 26 08:06:01 UTC 2019 - Tomáš Chvátal <tchvatal@suse.com>
+
 - Update to 0.45.1:
   * Many fixes and changes for llvm/cuda updates
     See CHANGE_LOG file for details

python-numba.spec

@@ -17,8 +17,9 @@
 
 
 %{?!python_module:%define python_module() python-%{**} python3-%{**}}
+%define         skip_python2 1
 Name:           python-numba
-Version:        0.45.1
+Version:        0.46.0
 Release:        0
 Summary:        NumPy-aware optimizing compiler for Python using LLVM
 License:        BSD-2-Clause
@@ -26,7 +27,13 @@ Group:          Development/Languages/Python
 URL:            https://github.com/numba/numba
 Source:         https://files.pythonhosted.org/packages/source/n/numba/numba-%{version}.tar.gz
 Patch0:         skip-failing-tests.patch
+# PATCH-FIX-UPSTREAM fix-max-name-size.patch -- fix for gh#numba/numba#3876 -- from gh#numba/numba#4373
+Patch1:         fix-max-name-size.patch
+BuildRequires:  %{python_module Jinja2}
+BuildRequires:  %{python_module Pygments}
+BuildRequires:  %{python_module cffi}
 BuildRequires:  %{python_module devel}
+BuildRequires:  %{python_module ipython}
 BuildRequires:  %{python_module llvmlite >= 0.29}
 BuildRequires:  %{python_module numpy-devel >= 1.10}
 BuildRequires:  %{python_module pytest}
@@ -36,15 +43,24 @@ BuildRequires:  fdupes
 BuildRequires:  gcc-c++
 BuildRequires:  python-funcsigs
 BuildRequires:  python-rpm-macros
-BuildRequires:  python-singledispatch
+BuildRequires:  python2-enum34
+BuildRequires:  python2-funcsigs
+BuildRequires:  python2-singledispatch
+BuildRequires:  python3-tbb
+BuildRequires:  tbb-devel
 Requires:       python-llvmlite >= 0.29
 Requires:       python-numpy >= 1.10
 Requires:       python-scipy >= 0.16
+Recommends:     python-Jinja2
+Recommends:     python-Pygments
+Recommends:     python-cffi
+Recommends:     python-tbb
 Requires(post): update-alternatives
 Requires(preun): update-alternatives
 %ifpython2
-Requires:       python-funcsigs
+Requires:       python2-enum34
-Requires:       python-singledispatch
+Requires:       python2-funcsigs
+Requires:       python2-singledispatch
 %endif
 %python_subpackages
 
@@ -81,6 +97,7 @@ This package contains files for developing applications using numba.
 sed -i '1{\@^#!%{_bindir}/env python@d}' numba/appdirs.py
 
 %build
+export CFLAGS="%{optflags} -fPIC"
 %python_build
 
 %install
@@ -91,11 +108,13 @@ sed -i '1{\@^#!%{_bindir}/env python@d}' numba/appdirs.py
 %python_clone -a %{buildroot}%{_bindir}/pycc
 
 %check
+mv numba numba_temp
+export NUMBA_PARALLEL_DIAGNOSTICS=1
 %{python_expand export PYTHONPATH=%{buildroot}%{$python_sitearch}
-$python setup.py build_ext --inplace
 %{buildroot}%{_bindir}/numba-%{$python_bin_suffix} -s
 $python -m numba.runtests -v -b --exclude-tags='long_running' -m %{_smp_build_ncpus} -- numba.tests
 }
+mv numba_temp numba
 
 %post
 %{python_install_alternative numba pycc}

skip-failing-tests.patch

@@ -12,18 +12,6 @@ Index: numba-0.45.1/numba/tests/test_runtests.py
      def test_random(self):
          self.check_testsuite_size(
              ['--random', '0.1', 'numba.tests.npyufunc'], 5)
-Index: numba-0.45.1/numba/tests/test_jitclasses.py
-===================================================================
---- numba-0.45.1.orig/numba/tests/test_jitclasses.py
-+++ numba-0.45.1/numba/tests/test_jitclasses.py
-@@ -869,6 +869,7 @@ class TestJitClass(TestCase, MemoryLeakM
-         self.assertEqual(t[2:2:1], 2)
-         self.assertEqual(t[6:6:1], 3)
- 
-+    @unittest.skip("This will fail with system llvm and LTO")
-     def test_jitclass_longlabel_not_truncated(self):
-         # See issue #3872, llvm 7 introduced a max label length of 1024 chars
-         # Numba ships patched llvm 7.1 (ppc64le) and patched llvm 8 to undo this
 Index: numba-0.45.1/numba/tests/test_parfors.py
 ===================================================================
 --- numba-0.45.1.orig/numba/tests/test_parfors.py