Accepting request 1046630 from devel:languages:python:numeric

OBS-URL: https://build.opensuse.org/request/show/1046630
OBS-URL: https://build.opensuse.org/package/show/openSUSE:Factory/python-numba?expand=0&rev=36
This commit is contained in:
Dominique Leuenberger 2023-01-04 16:51:09 +00:00 committed by Git OBS Bridge
commit d90b9e78dd
9 changed files with 521 additions and 46 deletions

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@ -1,3 +1,5 @@
<multibuild> <multibuild>
<package>test</package> <package>test-py38</package>
<package>test-py39</package>
<package>test-py310</package>
</multibuild> </multibuild>

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@ -1,12 +0,0 @@
Index: numba-0.56.2/numba/tests/test_cli.py
===================================================================
--- numba-0.56.2.orig/numba/tests/test_cli.py
+++ numba-0.56.2/numba/tests/test_cli.py
@@ -264,6 +264,7 @@ class TestGDBCLIInfoBrokenGdbs(TestCase)
self.assertIn("No such file or directory", stdout)
self.assertIn(path, stdout)
+ @unittest.skip("Fails on type check in OBS")
def test_nonsense_gdb_binary(self):
# Tests that a nonsense binary specified as gdb it picked up ok
env = os.environ.copy()

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@ -1,3 +0,0 @@
version https://git-lfs.github.com/spec/v1
oid sha256:3492f0a5d09e257fc521f5377a6c6b907eec1920d14739f0b2458b9d29946a5a
size 2417234

3
numba-0.56.4.tar.gz Normal file
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@ -0,0 +1,3 @@
version https://git-lfs.github.com/spec/v1
oid sha256:32d9fef412c81483d7efe0ceb6cf4d3310fde8b624a9cecca00f790573ac96ee
size 2418748

415
numba-pr8620-np1.24.patch Normal file
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@ -0,0 +1,415 @@
Index: numba-0.56.4/numba/cuda/tests/cudapy/test_intrinsics.py
===================================================================
--- numba-0.56.4.orig/numba/cuda/tests/cudapy/test_intrinsics.py
+++ numba-0.56.4/numba/cuda/tests/cudapy/test_intrinsics.py
@@ -619,7 +619,7 @@ class TestCudaIntrinsic(CUDATestCase):
arg2 = np.float16(4.)
compiled[1, 1](ary, arg1, arg2)
np.testing.assert_allclose(ary[0], arg2)
- arg1 = np.float(5.)
+ arg1 = np.float16(5.)
compiled[1, 1](ary, arg1, arg2)
np.testing.assert_allclose(ary[0], arg1)
@@ -631,7 +631,7 @@ class TestCudaIntrinsic(CUDATestCase):
arg2 = np.float16(4.)
compiled[1, 1](ary, arg1, arg2)
np.testing.assert_allclose(ary[0], arg1)
- arg1 = np.float(5.)
+ arg1 = np.float16(5.)
compiled[1, 1](ary, arg1, arg2)
np.testing.assert_allclose(ary[0], arg2)
Index: numba-0.56.4/numba/np/arraymath.py
===================================================================
--- numba-0.56.4.orig/numba/np/arraymath.py
+++ numba-0.56.4/numba/np/arraymath.py
@@ -4177,6 +4177,10 @@ iinfo = namedtuple('iinfo', _iinfo_suppo
# This module is imported under the compiler lock which should deal with the
# lack of thread safety in the warning filter.
def _gen_np_machar():
+ # NumPy 1.24 removed np.MachAr
+ if numpy_version >= (1, 24):
+ return
+
np122plus = numpy_version >= (1, 22)
w = None
with warnings.catch_warnings(record=True) as w:
Index: numba-0.56.4/numba/np/ufunc/_internal.c
===================================================================
--- numba-0.56.4.orig/numba/np/ufunc/_internal.c
+++ numba-0.56.4/numba/np/ufunc/_internal.c
@@ -285,9 +285,7 @@ static struct _ufunc_dispatch {
PyCFunctionWithKeywords ufunc_accumulate;
PyCFunctionWithKeywords ufunc_reduceat;
PyCFunctionWithKeywords ufunc_outer;
-#if NPY_API_VERSION >= 0x00000008
PyCFunction ufunc_at;
-#endif
} ufunc_dispatch;
static int
@@ -303,10 +301,8 @@ init_ufunc_dispatch(int *numpy_uses_fast
if (strncmp(crnt_name, "accumulate", 11) == 0) {
ufunc_dispatch.ufunc_accumulate =
(PyCFunctionWithKeywords)crnt->ml_meth;
-#if NPY_API_VERSION >= 0x00000008
} else if (strncmp(crnt_name, "at", 3) == 0) {
ufunc_dispatch.ufunc_at = crnt->ml_meth;
-#endif
} else {
result = -1;
}
@@ -326,10 +322,15 @@ init_ufunc_dispatch(int *numpy_uses_fast
} else if (strncmp(crnt_name, "reduceat", 9) == 0) {
ufunc_dispatch.ufunc_reduceat =
(PyCFunctionWithKeywords)crnt->ml_meth;
+ } else if (strncmp(crnt_name, "resolve_dtypes", 15) == 0) {
+ /* Ignored */
} else {
result = -1;
}
break;
+ case '_':
+ // We ignore private methods
+ break;
default:
result = -1; /* Unknown method */
}
@@ -341,6 +342,8 @@ init_ufunc_dispatch(int *numpy_uses_fast
*numpy_uses_fastcall = crnt->ml_flags & METH_FASTCALL;
}
else if (*numpy_uses_fastcall != (crnt->ml_flags & METH_FASTCALL)) {
+ PyErr_SetString(PyExc_RuntimeError,
+ "ufunc.at() flags do not match numpy_uses_fastcall");
return -1;
}
}
@@ -351,11 +354,13 @@ init_ufunc_dispatch(int *numpy_uses_fast
&& (ufunc_dispatch.ufunc_accumulate != NULL)
&& (ufunc_dispatch.ufunc_reduceat != NULL)
&& (ufunc_dispatch.ufunc_outer != NULL)
-#if NPY_API_VERSION >= 0x00000008
&& (ufunc_dispatch.ufunc_at != NULL)
-#endif
);
+ } else {
+ char const * const fmt = "Unexpected ufunc method %s()";
+ PyErr_Format(PyExc_RuntimeError, fmt, crnt_name);
}
+
return result;
}
@@ -425,13 +430,11 @@ dufunc_outer_fast(PyDUFuncObject * self,
}
-#if NPY_API_VERSION >= 0x00000008
static PyObject *
dufunc_at(PyDUFuncObject * self, PyObject * args)
{
return ufunc_dispatch.ufunc_at((PyObject*)self->ufunc, args);
}
-#endif
static PyObject *
dufunc__compile_for_args(PyDUFuncObject * self, PyObject * args,
@@ -609,11 +612,9 @@ static struct PyMethodDef dufunc_methods
{"outer",
(PyCFunction)dufunc_outer,
METH_VARARGS | METH_KEYWORDS, NULL},
-#if NPY_API_VERSION >= 0x00000008
{"at",
(PyCFunction)dufunc_at,
METH_VARARGS, NULL},
-#endif
{"_compile_for_args",
(PyCFunction)dufunc__compile_for_args,
METH_VARARGS | METH_KEYWORDS,
@@ -643,11 +644,9 @@ static struct PyMethodDef dufunc_methods
{"outer",
(PyCFunction)dufunc_outer_fast,
METH_FASTCALL | METH_KEYWORDS, NULL},
-#if NPY_API_VERSION >= 0x00000008
{"at",
(PyCFunction)dufunc_at,
METH_VARARGS, NULL},
-#endif
{"_compile_for_args",
(PyCFunction)dufunc__compile_for_args,
METH_VARARGS | METH_KEYWORDS,
@@ -791,9 +790,7 @@ MOD_INIT(_internal)
if (PyModule_AddIntMacro(m, PyUFunc_One)
|| PyModule_AddIntMacro(m, PyUFunc_Zero)
|| PyModule_AddIntMacro(m, PyUFunc_None)
-#if NPY_API_VERSION >= 0x00000007
|| PyModule_AddIntMacro(m, PyUFunc_ReorderableNone)
-#endif
)
return MOD_ERROR_VAL;
Index: numba-0.56.4/numba/stencils/stencilparfor.py
===================================================================
--- numba-0.56.4.orig/numba/stencils/stencilparfor.py
+++ numba-0.56.4/numba/stencils/stencilparfor.py
@@ -21,6 +21,7 @@ from numba.core.ir_utils import (get_cal
find_callname, require, find_const, GuardException)
from numba.core.errors import NumbaValueError
from numba.core.utils import OPERATORS_TO_BUILTINS
+from numba.np import numpy_support
def _compute_last_ind(dim_size, index_const):
@@ -264,7 +265,11 @@ class StencilPass(object):
dtype_g_np_assign = ir.Assign(dtype_g_np, dtype_g_np_var, loc)
init_block.body.append(dtype_g_np_assign)
- dtype_np_attr_call = ir.Expr.getattr(dtype_g_np_var, return_type.dtype.name, loc)
+ return_type_name = numpy_support.as_dtype(
+ return_type.dtype).type.__name__
+ if return_type_name == 'bool':
+ return_type_name = 'bool_'
+ dtype_np_attr_call = ir.Expr.getattr(dtype_g_np_var, return_type_name, loc)
dtype_attr_var = ir.Var(scope, mk_unique_var("$np_attr_attr"), loc)
self.typemap[dtype_attr_var.name] = types.functions.NumberClass(return_type.dtype)
dtype_attr_assign = ir.Assign(dtype_np_attr_call, dtype_attr_var, loc)
Index: numba-0.56.4/numba/tests/test_array_methods.py
===================================================================
--- numba-0.56.4.orig/numba/tests/test_array_methods.py
+++ numba-0.56.4/numba/tests/test_array_methods.py
@@ -1193,7 +1193,7 @@ class TestArrayMethods(MemoryLeakMixin,
pyfunc = array_sum_dtype_kws
cfunc = jit(nopython=True)(pyfunc)
all_dtypes = [np.float64, np.float32, np.int64, np.int32, np.uint32,
- np.uint64, np.complex64, np.complex128, TIMEDELTA_M]
+ np.uint64, np.complex64, np.complex128]
all_test_arrays = [
[np.ones((7, 6, 5, 4, 3), arr_dtype),
np.ones(1, arr_dtype),
@@ -1207,8 +1207,7 @@ class TestArrayMethods(MemoryLeakMixin,
np.dtype('uint32'): [np.float64, np.int64, np.float32],
np.dtype('uint64'): [np.float64, np.int64],
np.dtype('complex64'): [np.complex64, np.complex128],
- np.dtype('complex128'): [np.complex128],
- np.dtype(TIMEDELTA_M): [np.dtype(TIMEDELTA_M)]}
+ np.dtype('complex128'): [np.complex128]}
for arr_list in all_test_arrays:
for arr in arr_list:
@@ -1216,15 +1215,15 @@ class TestArrayMethods(MemoryLeakMixin,
subtest_str = ("Testing np.sum with {} input and {} output"
.format(arr.dtype, out_dtype))
with self.subTest(subtest_str):
- self.assertPreciseEqual(pyfunc(arr, dtype=out_dtype),
- cfunc(arr, dtype=out_dtype))
+ self.assertPreciseEqual(pyfunc(arr, dtype=out_dtype),
+ cfunc(arr, dtype=out_dtype))
def test_sum_axis_dtype_kws(self):
""" test sum with axis and dtype parameters over a whole range of dtypes """
pyfunc = array_sum_axis_dtype_kws
cfunc = jit(nopython=True)(pyfunc)
all_dtypes = [np.float64, np.float32, np.int64, np.int32, np.uint32,
- np.uint64, np.complex64, np.complex128, TIMEDELTA_M]
+ np.uint64, np.complex64, np.complex128]
all_test_arrays = [
[np.ones((7, 6, 5, 4, 3), arr_dtype),
np.ones(1, arr_dtype),
@@ -1238,9 +1237,7 @@ class TestArrayMethods(MemoryLeakMixin,
np.dtype('uint32'): [np.float64, np.int64, np.float32],
np.dtype('uint64'): [np.float64, np.uint64],
np.dtype('complex64'): [np.complex64, np.complex128],
- np.dtype('complex128'): [np.complex128],
- np.dtype(TIMEDELTA_M): [np.dtype(TIMEDELTA_M)],
- np.dtype(TIMEDELTA_Y): [np.dtype(TIMEDELTA_Y)]}
+ np.dtype('complex128'): [np.complex128]}
for arr_list in all_test_arrays:
for arr in arr_list:
Index: numba-0.56.4/numba/tests/test_comprehension.py
===================================================================
--- numba-0.56.4.orig/numba/tests/test_comprehension.py
+++ numba-0.56.4/numba/tests/test_comprehension.py
@@ -11,6 +11,7 @@ from numba import jit, typed
from numba.core import types, utils
from numba.core.errors import TypingError, LoweringError
from numba.core.types.functions import _header_lead
+from numba.np.numpy_support import numpy_version
from numba.tests.support import tag, _32bit, captured_stdout
@@ -360,6 +361,7 @@ class TestArrayComprehension(unittest.Te
self.check(comp_nest_with_array_conditional, 5,
assert_allocate_list=True)
+ @unittest.skipUnless(numpy_version < (1, 24), 'Removed in NumPy 1.24')
def test_comp_nest_with_dependency(self):
def comp_nest_with_dependency(n):
l = np.array([[i * j for j in range(i+1)] for i in range(n)])
Index: numba-0.56.4/numba/tests/test_linalg.py
===================================================================
--- numba-0.56.4.orig/numba/tests/test_linalg.py
+++ numba-0.56.4/numba/tests/test_linalg.py
@@ -1122,6 +1122,32 @@ class TestLinalgSvd(TestLinalgBase):
Tests for np.linalg.svd.
"""
+ # This checks that A ~= U*S*V**H, i.e. SV decomposition ties out. This is
+ # required as NumPy uses only double precision LAPACK routines and
+ # computation of SVD is numerically sensitive. Numba uses type-specific
+ # routines and therefore sometimes comes out with a different answer to
+ # NumPy (orthonormal bases are not unique, etc.).
+
+ def check_reconstruction(self, a, got, expected):
+ u, sv, vt = got
+
+ # Check they are dimensionally correct
+ for k in range(len(expected)):
+ self.assertEqual(got[k].shape, expected[k].shape)
+
+ # Columns in u and rows in vt dictates the working size of s
+ s = np.zeros((u.shape[1], vt.shape[0]))
+ np.fill_diagonal(s, sv)
+
+ rec = np.dot(np.dot(u, s), vt)
+ resolution = np.finfo(a.dtype).resolution
+ np.testing.assert_allclose(
+ a,
+ rec,
+ rtol=10 * resolution,
+ atol=100 * resolution # zeros tend to be fuzzy
+ )
+
@needs_lapack
def test_linalg_svd(self):
"""
@@ -1150,34 +1176,8 @@ class TestLinalgSvd(TestLinalgBase):
# plain match failed, test by reconstruction
use_reconstruction = True
- # if plain match fails then reconstruction is used.
- # this checks that A ~= U*S*V**H
- # i.e. SV decomposition ties out
- # this is required as numpy uses only double precision lapack
- # routines and computation of svd is numerically
- # sensitive, numba using the type specific routines therefore
- # sometimes comes out with a different answer (orthonormal bases
- # are not unique etc.).
if use_reconstruction:
- u, sv, vt = got
-
- # check they are dimensionally correct
- for k in range(len(expected)):
- self.assertEqual(got[k].shape, expected[k].shape)
-
- # regardless of full_matrices cols in u and rows in vt
- # dictates the working size of s
- s = np.zeros((u.shape[1], vt.shape[0]))
- np.fill_diagonal(s, sv)
-
- rec = np.dot(np.dot(u, s), vt)
- resolution = np.finfo(a.dtype).resolution
- np.testing.assert_allclose(
- a,
- rec,
- rtol=10 * resolution,
- atol=100 * resolution # zeros tend to be fuzzy
- )
+ self.check_reconstruction(a, got, expected)
# Ensure proper resource management
with self.assertNoNRTLeak():
@@ -1238,8 +1238,11 @@ class TestLinalgSvd(TestLinalgBase):
got = func(X, False)
np.testing.assert_allclose(X, X_orig)
- for e_a, g_a in zip(expected, got):
- np.testing.assert_allclose(e_a, g_a)
+ try:
+ for e_a, g_a in zip(expected, got):
+ np.testing.assert_allclose(e_a, g_a)
+ except AssertionError:
+ self.check_reconstruction(X, got, expected)
class TestLinalgQr(TestLinalgBase):
Index: numba-0.56.4/numba/tests/test_mathlib.py
===================================================================
--- numba-0.56.4.orig/numba/tests/test_mathlib.py
+++ numba-0.56.4/numba/tests/test_mathlib.py
@@ -516,7 +516,7 @@ class TestMathLib(TestCase):
with warnings.catch_warnings():
warnings.simplefilter("error", RuntimeWarning)
self.assertRaisesRegexp(RuntimeWarning,
- 'overflow encountered in .*_scalars',
+ 'overflow encountered in .*scalar',
naive_hypot, val, val)
def test_hypot_npm(self):
Index: numba-0.56.4/numba/tests/test_np_functions.py
===================================================================
--- numba-0.56.4.orig/numba/tests/test_np_functions.py
+++ numba-0.56.4/numba/tests/test_np_functions.py
@@ -932,11 +932,11 @@ class TestNPFunctions(MemoryLeakMixin, T
yield np.inf, None
yield np.PINF, None
yield np.asarray([-np.inf, 0., np.inf]), None
- yield np.NINF, np.zeros(1, dtype=np.bool)
- yield np.inf, np.zeros(1, dtype=np.bool)
- yield np.PINF, np.zeros(1, dtype=np.bool)
+ yield np.NINF, np.zeros(1, dtype=np.bool_)
+ yield np.inf, np.zeros(1, dtype=np.bool_)
+ yield np.PINF, np.zeros(1, dtype=np.bool_)
yield np.NINF, np.empty(12)
- yield np.asarray([-np.inf, 0., np.inf]), np.zeros(3, dtype=np.bool)
+ yield np.asarray([-np.inf, 0., np.inf]), np.zeros(3, dtype=np.bool_)
pyfuncs = [isneginf, isposinf]
for pyfunc in pyfuncs:
@@ -4775,6 +4775,7 @@ def foo():
eval(compile(funcstr, '<string>', 'exec'))
return locals()['foo']
+ @unittest.skipIf(numpy_version >= (1, 24), "NumPy < 1.24 required")
def test_MachAr(self):
attrs = ('ibeta', 'it', 'machep', 'eps', 'negep', 'epsneg', 'iexp',
'minexp', 'xmin', 'maxexp', 'xmax', 'irnd', 'ngrd',
@@ -4817,7 +4818,8 @@ def foo():
cfunc = jit(nopython=True)(iinfo)
cfunc(np.float64(7))
- @unittest.skipUnless(numpy_version >= (1, 22), "Needs NumPy >= 1.22")
+ @unittest.skipUnless((1, 22) <= numpy_version < (1, 24),
+ "Needs NumPy >= 1.22, < 1.24")
@TestCase.run_test_in_subprocess
def test_np_MachAr_deprecation_np122(self):
# Tests that Numba is replaying the NumPy 1.22 deprecation warning
Index: numba-0.56.4/setup.py
===================================================================
--- numba-0.56.4.orig/setup.py
+++ numba-0.56.4/setup.py
@@ -23,7 +23,7 @@ min_python_version = "3.7"
max_python_version = "3.11" # exclusive
min_numpy_build_version = "1.11"
min_numpy_run_version = "1.18"
-max_numpy_run_version = "1.24"
+max_numpy_run_version = "1.25" # exclusive
min_llvmlite_version = "0.39.0dev0"
max_llvmlite_version = "0.40"
Index: numba-0.56.4/numba/__init__.py
===================================================================
--- numba-0.56.4.orig/numba/__init__.py
+++ numba-0.56.4/numba/__init__.py
@@ -142,8 +142,8 @@ def _ensure_critical_deps():
if numpy_version < (1, 18):
raise ImportError("Numba needs NumPy 1.18 or greater")
- elif numpy_version > (1, 23):
- raise ImportError("Numba needs NumPy 1.23 or less")
+ elif numpy_version > (1, 24):
+ raise ImportError("Numba needs NumPy 1.24 or less")
try:
import scipy

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@ -1,3 +1,35 @@
-------------------------------------------------------------------
Tue Jan 3 12:13:00 UTC 2023 - Ben Greiner <code@bnavigator.de>
- Split out python flavors into testing multibuilds. Depending on
the obs worker, the test suite can take almost an hour per
flavor.
- Replace allow-numpy-1.24.patch with an updated
numba-pr8620-np1.24.patch to also work with still present numpy
1.23 in Factory (discussed upstream in gh#numba/numba#8620)
- Merge fix-cli-test.patch into skip-failing-tests.patch
-------------------------------------------------------------------
Mon Jan 2 21:27:24 UTC 2023 - Ben Greiner <code@bnavigator.de>
- Clean up the specfile
* restore the multibuild
* Patch allow-numpy-1.24.patch is the WIP gh#numba/numba#8620
-------------------------------------------------------------------
Sun Jan 1 11:41:11 UTC 2023 - Matej Cepl <mcepl@suse.com>
- Update to 0.56.4:
- This is a bugfix release to fix a regression in the CUDA
target in relation to the .view() method on CUDA device
arrays that is present when using NumPy version 1.23.0 or
later.
- This is a bugfix release to remove the version restriction
applied to the setuptools package and to fix a bug in the
CUDA target in relation to copying zero length device arrays
to zero length host arrays.
- Add allow-numpy-1.24.patch to allow work with numpy 1.24
------------------------------------------------------------------- -------------------------------------------------------------------
Mon Oct 10 10:07:52 UTC 2022 - John Vandenberg <jayvdb@gmail.com> Mon Oct 10 10:07:52 UTC 2022 - John Vandenberg <jayvdb@gmail.com>

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@ -1,7 +1,7 @@
# #
# spec file # spec file
# #
# Copyright (c) 2022 SUSE LLC # Copyright (c) 2023 SUSE LLC
# #
# All modifications and additions to the file contributed by third parties # All modifications and additions to the file contributed by third parties
# remain the property of their copyright owners, unless otherwise agreed # remain the property of their copyright owners, unless otherwise agreed
@ -16,35 +16,59 @@
# #
%{?!python_module:%define python_module() python3-%{**}}
%define skip_python2 1 %define skip_python2 1
# Not compatible with Python 3.11 yet. If this changes, and the python311
# flavor is active, make sure to expand the multibuild test flavors
# https://github.com/numba/numba/issues/8304
%define skip_python311 1
%define plainpython python %define plainpython python
# upper bound is exclusive: min-numpy_ver <= numpy < max_numpy_ver # upper bound is exclusive: min-numpy_ver <= numpy < max_numpy_ver
%define min_numpy_ver 1.18 %define min_numpy_ver 1.18
%define max_numpy_ver 1.24 %define max_numpy_ver 1.25
%global flavor @BUILD_FLAVOR@%{nil} %global flavor @BUILD_FLAVOR@%{nil}
%if "%{flavor}" == "test" %if "%{flavor}" == ""
%define psuffix -test
%bcond_without test
%else
%define psuffix %{nil} %define psuffix %{nil}
%bcond_with test %bcond_with test
%endif %endif
Name: python-numba%{psuffix} %if "%{flavor}" == "test-py38"
Version: 0.56.2 %define psuffix -test-py38
%define skip_python39 1
%define skip_python310 1
%bcond_without test
%endif
%if "%{flavor}" == "test-py39"
%define psuffix -test-py39
%define skip_python38 1
%define skip_python310 1
%bcond_without test
%endif
%if "%{flavor}" == "test-py310"
%define psuffix -test-py310
%define skip_python38 1
%define skip_python39 1
%bcond_without test
%endif
Name: python-numba%{?psuffix}
Version: 0.56.4
Release: 0 Release: 0
Summary: NumPy-aware optimizing compiler for Python using LLVM Summary: NumPy-aware optimizing compiler for Python using LLVM
License: BSD-2-Clause License: BSD-2-Clause
URL: https://numba.pydata.org/ URL: https://numba.pydata.org/
# SourceRepository: https://github.com/numba/numba
Source: https://files.pythonhosted.org/packages/source/n/numba/numba-%{version}.tar.gz Source: https://files.pythonhosted.org/packages/source/n/numba/numba-%{version}.tar.gz
# PATCH-FIX-UPSTREAM numba-pr8620-np1.24.patch gh#numba/numba#8620 + raising upper bound in setup.py and numba/__init__.py
Patch1: numba-pr8620-np1.24.patch
# PATCH-FIX-OPENSUSE skip tests failing due to OBS specifics # PATCH-FIX-OPENSUSE skip tests failing due to OBS specifics
Patch2: fix-cli-test.patch
Patch3: skip-failing-tests.patch Patch3: skip-failing-tests.patch
# PATCH-FIX-OPENSUSE update-tbb-backend-calls-2021.6.patch, based on gh#numba/numba#7608 # PATCH-FIX-OPENSUSE update-tbb-backend-calls-2021.6.patch, based on gh#numba/numba#7608
Patch4: update-tbb-backend-calls-2021.6.patch Patch4: update-tbb-backend-calls-2021.6.patch
BuildRequires: %{python_module devel >= 3.7} BuildRequires: %{python_module devel >= 3.7}
BuildRequires: %{python_module numpy-devel >= %{min_numpy_ver} with %python-numpy-devel < %{max_numpy_ver}} BuildRequires: %{python_module numpy-devel >= %{min_numpy_ver} with %python-numpy-devel < %{max_numpy_ver}}
BuildRequires: %{python_module pip}
BuildRequires: %{python_module setuptools} BuildRequires: %{python_module setuptools}
BuildRequires: %{python_module wheel}
BuildRequires: fdupes BuildRequires: fdupes
BuildRequires: gcc-c++ BuildRequires: gcc-c++
BuildRequires: python-rpm-macros BuildRequires: python-rpm-macros
@ -116,19 +140,18 @@ rm numba/tests/test_typedlist.py
%build %build
%if !%{with test} %if !%{with test}
export CFLAGS="%{optflags} -fPIC" export CFLAGS="%{optflags} -fPIC"
%python_build %pyproject_wheel
%endif %endif
%install %install
%if !%{with test} %if !%{with test}
%python_install %pyproject_install
%{python_expand # %{python_expand #
%fdupes %{buildroot}%{$python_sitearch} %fdupes %{buildroot}%{$python_sitearch}
find %{buildroot}%{$python_sitearch} -name '*.[ch]' > devel-files0-%{$python_bin_suffix}.files find %{buildroot}%{$python_sitearch} -name '*.[ch]' > devel-files0-%{$python_bin_suffix}.files
sed 's|^%{buildroot}||' devel-files0-%{$python_bin_suffix}.files > devel-files-%{$python_bin_suffix}.files sed 's|^%{buildroot}||' devel-files0-%{$python_bin_suffix}.files > devel-files-%{$python_bin_suffix}.files
sed 's|^%{buildroot}|%%exclude |' devel-files0-%{$python_bin_suffix}.files > devel-files-exclude-%{$python_bin_suffix}.files sed 's|^%{buildroot}|%%exclude |' devel-files0-%{$python_bin_suffix}.files > devel-files-exclude-%{$python_bin_suffix}.files
} }
%python_clone -a %{buildroot}%{_bindir}/numba %python_clone -a %{buildroot}%{_bindir}/numba
%python_clone -a %{buildroot}%{_bindir}/pycc %python_clone -a %{buildroot}%{_bindir}/pycc
%endif %endif
@ -139,7 +162,7 @@ sed 's|^%{buildroot}|%%exclude |' devel-files0-%{$python_bin_suffix}.files > dev
mkdir emptytestdir mkdir emptytestdir
pushd emptytestdir pushd emptytestdir
%{python_expand # numbatests: check specific tests with `osc build -M test --define="numbatests <testnames>"` %{python_expand # numbatests: check specific tests with `osc build -M test --define="numbatests <testnames>"`
%{_bindir}/numba-%{$python_bin_suffix} -s %{_bindir}/numba-%%{$python_bin_suffix} -s
$python -m numba.runtests -v -b --exclude-tags='long_running' -m %{_smp_build_ncpus} -- %{?!numbatests:numba.tests}%{?numbatests} $python -m numba.runtests -v -b --exclude-tags='long_running' -m %{_smp_build_ncpus} -- %{?!numbatests:numba.tests}%{?numbatests}
} }
popd popd
@ -158,7 +181,7 @@ popd
%python_alternative %{_bindir}/numba %python_alternative %{_bindir}/numba
%python_alternative %{_bindir}/pycc %python_alternative %{_bindir}/pycc
%{python_sitearch}/numba/ %{python_sitearch}/numba/
%{python_sitearch}/numba-%{version}-py*.egg-info %{python_sitearch}/numba-%{version}.dist-info
%files %{python_files devel} -f devel-files-%{python_bin_suffix}.files %files %{python_files devel} -f devel-files-%{python_bin_suffix}.files
%license LICENSE %license LICENSE

View File

@ -1,8 +1,11 @@
Index: numba-0.54.0/numba/tests/test_parfors.py ---
=================================================================== numba/tests/test_parfors.py | 5 +++--
--- numba-0.54.0.orig/numba/tests/test_parfors.py numba/tests/test_parfors_passes.py | 1 +
+++ numba-0.54.0/numba/tests/test_parfors.py 2 files changed, 4 insertions(+), 2 deletions(-)
@@ -1146,6 +1146,7 @@ class TestParforNumPy(TestParforsBase):
--- a/numba/tests/test_parfors.py
+++ b/numba/tests/test_parfors.py
@@ -1174,6 +1174,7 @@ class TestParforNumPy(TestParforsBase):
self.check_variants(test_impl2, data_gen) self.check_variants(test_impl2, data_gen)
self.count_parfors_variants(test_impl2, data_gen) self.count_parfors_variants(test_impl2, data_gen)
@ -10,7 +13,7 @@ Index: numba-0.54.0/numba/tests/test_parfors.py
def test_ndarray_fill(self): def test_ndarray_fill(self):
def test_impl(x): def test_impl(x):
x.fill(7.0) x.fill(7.0)
@@ -3890,7 +3891,7 @@ class TestParforsVectorizer(TestPrangeBa @@ -4396,7 +4397,7 @@ class TestParforsVectorizer(TestPrangeBa
# to check vsqrtpd operates on zmm # to check vsqrtpd operates on zmm
match_vsqrtpd_on_zmm = re.compile('\n\s+vsqrtpd\s+.*zmm.*\n') match_vsqrtpd_on_zmm = re.compile('\n\s+vsqrtpd\s+.*zmm.*\n')
@ -19,7 +22,7 @@ Index: numba-0.54.0/numba/tests/test_parfors.py
def test_vectorizer_fastmath_asm(self): def test_vectorizer_fastmath_asm(self):
""" This checks that if fastmath is set and the underlying hardware """ This checks that if fastmath is set and the underlying hardware
is suitable, and the function supplied is amenable to fastmath based is suitable, and the function supplied is amenable to fastmath based
@@ -3933,7 +3934,7 @@ class TestParforsVectorizer(TestPrangeBa @@ -4439,7 +4440,7 @@ class TestParforsVectorizer(TestPrangeBa
# check no zmm addressing is present # check no zmm addressing is present
self.assertTrue('zmm' not in v) self.assertTrue('zmm' not in v)
@ -28,10 +31,8 @@ Index: numba-0.54.0/numba/tests/test_parfors.py
def test_unsigned_refusal_to_vectorize(self): def test_unsigned_refusal_to_vectorize(self):
""" This checks that if fastmath is set and the underlying hardware """ This checks that if fastmath is set and the underlying hardware
is suitable, and the function supplied is amenable to fastmath based is suitable, and the function supplied is amenable to fastmath based
Index: numba-0.54.0/numba/tests/test_parfors_passes.py --- a/numba/tests/test_parfors_passes.py
=================================================================== +++ b/numba/tests/test_parfors_passes.py
--- numba-0.54.0.orig/numba/tests/test_parfors_passes.py
+++ numba-0.54.0/numba/tests/test_parfors_passes.py
@@ -516,6 +516,7 @@ class TestConvertLoopPass(BaseTest): @@ -516,6 +516,7 @@ class TestConvertLoopPass(BaseTest):
str(raises.exception), str(raises.exception),
) )
@ -40,3 +41,15 @@ Index: numba-0.54.0/numba/tests/test_parfors_passes.py
def test_init_prange(self): def test_init_prange(self):
def test_impl(): def test_impl():
n = 20 n = 20
Index: numba-0.56.2/numba/tests/test_cli.py
===================================================================
--- numba-0.56.2.orig/numba/tests/test_cli.py
+++ numba-0.56.2/numba/tests/test_cli.py
@@ -264,6 +264,7 @@ class TestGDBCLIInfoBrokenGdbs(TestCase)
self.assertIn("No such file or directory", stdout)
self.assertIn(path, stdout)
+ @unittest.skip("Fails on type check in OBS")
def test_nonsense_gdb_binary(self):
# Tests that a nonsense binary specified as gdb it picked up ok
env = os.environ.copy()

View File

@ -1,7 +1,9 @@
Index: numba-0.56.2/numba/np/ufunc/tbbpool.cpp ---
=================================================================== numba/np/ufunc/tbbpool.cpp | 29 ++++++++++++++++++++++++-----
--- numba-0.56.2.orig/numba/np/ufunc/tbbpool.cpp 1 file changed, 24 insertions(+), 5 deletions(-)
+++ numba-0.56.2/numba/np/ufunc/tbbpool.cpp
--- a/numba/np/ufunc/tbbpool.cpp
+++ b/numba/np/ufunc/tbbpool.cpp
@@ -12,6 +12,7 @@ Implement parallel vectorize workqueue o @@ -12,6 +12,7 @@ Implement parallel vectorize workqueue o
#undef _XOPEN_SOURCE #undef _XOPEN_SOURCE
#endif #endif