Accepting request 1046448 from devel:languages:python:numeric
OBS-URL: https://build.opensuse.org/request/show/1046448 OBS-URL: https://build.opensuse.org/package/show/openSUSE:Factory/python-numpy?expand=0&rev=111
This commit is contained in:
commit
eefc1342c8
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version https://git-lfs.github.com/spec/v1
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oid sha256:ed2cc92af0efad20198638c69bb0fc2870a58dabfba6eb722c933b48556c686c
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size 10728765
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3
numpy-1.24.1.tar.gz
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3
numpy-1.24.1.tar.gz
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version https://git-lfs.github.com/spec/v1
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oid sha256:2386da9a471cc00a1f47845e27d916d5ec5346ae9696e01a8a34760858fe9dd2
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size 10903184
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@ -13,14 +13,16 @@ build to fail. Since this is windows-specific, it can be
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safely removed.
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--- a/numpy/core/setup_common.py
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+++ b/numpy/core/setup_common.py
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@@ -226,7 +226,7 @@ OPTIONAL_FUNCTION_ATTRIBUTES = [('__attr
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]
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Index: numpy-1.24.0/numpy/core/setup_common.py
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===================================================================
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--- numpy-1.24.0.orig/numpy/core/setup_common.py
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+++ numpy-1.24.0/numpy/core/setup_common.py
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@@ -141,7 +141,7 @@ OPTIONAL_FILE_FUNCS = ["ftello", "fseeko
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OPTIONAL_MISC_FUNCS = ["backtrace", "madvise"]
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# variable attributes tested via "int %s a" % attribute
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-OPTIONAL_VARIABLE_ATTRIBUTES = ["__thread", "__declspec(thread)"]
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+OPTIONAL_VARIABLE_ATTRIBUTES = ["__thread"]
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# Subset of OPTIONAL_STDFUNCS which may already have HAVE_* defined by Python.h
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OPTIONAL_STDFUNCS_MAYBE = [
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# Subset of OPTIONAL_*_FUNCS which may already have HAVE_* defined by Python.h
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OPTIONAL_FUNCS_MAYBE = [
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@ -1,3 +1,6 @@
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# This file is required for testing
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addFilter("devel-file-in-non-devel-package.*/usr/lib.*/python.*/site-packages/numpy/f2py/tests/src/array_from_pyobj/wrapmodule.c")
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# These files are required for testing (and testing the package on a live system)
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addFilter("devel-file-in-non-devel-package.*numpy/f2py/tests/src/array_from_pyobj/wrapmodule.c")
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addFilter("devel-file-in-non-devel-package.*numpy/core/tests/examples")
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addFilter("devel-file-in-non-devel-package.*numpy/core/tests/data")
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addFilter("hidden-file-or-dir .*/numpy/f2py/tests/src/assumed_shape/.f2py_f2cmap")
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addFilter("hidden-file-or-dir .*/numpy/f2py/tests/src/f2cmap/.f2py_f2cmap")
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@ -1,3 +1,61 @@
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-------------------------------------------------------------------
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Mon Jan 2 19:31:48 UTC 2023 - Ben Greiner <code@bnavigator.de>
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- Update to 1.24.1
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* NumPy 1.24.1 is a maintenance release that fixes bugs and
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regressions discovered after the 1.24.0 release. The Python
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versions supported by this release are 3.8-3.11.
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* #22820: BLD: add workaround in setup.py for newer setuptools
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* #22830: BLD: CIRRUS_TAG redux
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* #22831: DOC: fix a couple typos in 1.23 notes
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* #22832: BUG: Fix refcounting errors found using pytest-leaks
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* #22834: BUG, SIMD: Fix invalid value encountered in several
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ufuncs
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* #22837: TST: ignore more np.distutils.log imports
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* #22839: BUG: Do not use getdata() in np.ma.masked_invalid
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* #22847: BUG: Ensure correct behavior for rows ending in
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delimiter in...
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* #22848: BUG, SIMD: Fix the bitmask of the boolean comparison
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* #22857: BLD: Help raspian arm + clang 13 about
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__builtin_mul_overflow
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* #22858: API: Ensure a full mask is returned for masked_invalid
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* #22866: BUG: Polynomials now copy properly (#22669)
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* #22867: BUG, SIMD: Fix memory overlap in ufunc comparison loops
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* #22868: BUG: Fortify string casts against floating point
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warnings
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* #22875: TST: Ignore nan-warnings in randomized out tests
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* #22883: MAINT: restore npymath implementations needed for
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freebsd
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* #22884: BUG: Fix integer overflow in in1d for mixed integer
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dtypes #22877
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* #22887: BUG: Use whole file for encoding checks with
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charset_normalizer.
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- Drop numpy-distutils-ignore.patch fixed upstream
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-------------------------------------------------------------------
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Mon Dec 19 13:36:35 UTC 2022 - Ben Greiner <code@bnavigator.de>
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- Update to 1.24.0
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* The NumPy 1.24.0 release continues the ongoing work to improve
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the handling and promotion of dtypes, increase the execution
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speed, and clarify the documentation. There are also a large
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number of new and expired deprecations due to changes in
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promotion and cleanups. This might be called a deprecation
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release. Highlights are:
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- Many new deprecations, check them out.
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- Many expired deprecations,
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- New F2PY features and fixes.
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- New “dtype” and “casting” keywords for stacking functions.
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* For a detailed description see
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https://numpy.org/doc/stable/release/1.24.0-notes.html
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- Add numpy-distutils-ignore.patch gh#numpy/numpy#22828
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- Fix running the tests: Actually fail on errors
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-------------------------------------------------------------------
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Wed Dec 14 20:59:50 UTC 2022 - Ben Greiner <code@bnavigator.de>
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- Support builds without any primary python3 package (:backports)
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-------------------------------------------------------------------
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Thu Oct 20 13:48:08 UTC 2022 - Ben Greiner <code@bnavigator.de>
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@ -1,7 +1,7 @@
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#
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# spec file
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#
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# Copyright (c) 2022 SUSE LLC
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# Copyright (c) 2023 SUSE LLC
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#
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# All modifications and additions to the file contributed by third parties
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# remain the property of their copyright owners, unless otherwise agreed
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@ -17,9 +17,10 @@
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%global flavor @BUILD_FLAVOR@%{nil}
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%define ver 1.23.4
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%define _ver 1_23_4
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%define ver 1.24.1
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%define _ver 1_24_1
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%define pname python-numpy
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%define plainpython python
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%define hpc_upcase_trans_hyph() %(echo %{**} | tr [a-z] [A-Z] | tr '-' '_')
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%if "%{flavor}" == ""
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%bcond_with hpc
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@ -85,22 +86,23 @@ Patch1: numpy-1.9.0-remove-__declspec.patch
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BuildRequires: %{python_module Cython >= 0.29.30}
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BuildRequires: %{python_module base >= 3.8}
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BuildRequires: %{python_module devel}
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BuildRequires: %{python_module hypothesis >= 6.24.1}
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BuildRequires: %{python_module pytest >= 6.2.5}
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BuildRequires: %{python_module pytest-xdist}
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BuildRequires: %{python_module setuptools >= 60.0.0}
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BuildRequires: %{python_module testsuite}
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BuildRequires: gcc-c++
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BuildRequires: python-rpm-macros >= 20210929
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BuildConflicts: gcc11 < 11.2
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%if 0%{?suse_version}
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BuildRequires: fdupes
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%endif
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# SECTION test requirements
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BuildRequires: %{python_module pytest >= 6.2.5}
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BuildRequires: %{python_module hypothesis >= 6.24.1}
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BuildRequires: %{python_module pytest-xdist}
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BuildRequires: %{python_module testsuite}
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BuildRequires: %{python_module typing-extensions >= 4.2.0}
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# /SECTION
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%if %{without hpc}
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# Last version which packaged %%{_bindir}/f2py without update-alternatives
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# Protect it from substitution
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%define oldpy_numpy python-numpy
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Conflicts: %{oldpy_numpy} <= 1.12.0
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Conflicts: %{plainpython}-numpy <= 1.12.0
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%if 0%{?suse_version}
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BuildRequires: gcc-fortran
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%else
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@ -149,6 +151,7 @@ basic linear algebra and random number generation.
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Summary: Development files for numpy applications
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Requires: %{name} = %{version}
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Requires: python-devel
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Requires: %plainpython(abi) = %{python_version}
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%if %{without hpc}
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%if %{with openblas}
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Requires: openblas-devel
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@ -202,6 +205,9 @@ export CFLAGS="%{optflags} -fno-strict-aliasing"
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%if !%{with hpc}
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%python_clone -a %{buildroot}%{_bindir}/f2py
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%python_expand rm %{buildroot}%{$python_sitearch}/numpy/core/include/numpy/.doxyfile
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%else
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rm %{buildroot}%{p_python_sitearch}/numpy/core/include/numpy/.doxyfile
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%endif
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%if 0%{?suse_version}
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@ -253,6 +259,7 @@ EOF
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%endif
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%check
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# https://numpy.org/doc/stable/dev/development_environment.html#running-tests
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%if %{without hpc}
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export PATH="%{buildroot}%{_bindir}:$PATH"
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@ -263,6 +270,12 @@ pushd testing
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# flaky tests
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test_failok+=" or test_structured_object_indexing"
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test_failok+=" or test_structured_object_item_setting"
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# flaky due to memory consumption
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test_failok+=" or test_big_arrays"
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# gh#numpy/numpy#22825
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test_failok+=" or TestPrintOptions"
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# gh#numpy/numpy#22835
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test_failok+=" or test_keepdims_out"
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# boo#1148173 gh#numpy/numpy#14438
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%ifarch ppc64 ppc64le
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test_failok+=" or test_generalized_sq"
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@ -272,6 +285,10 @@ test_failok+=" or test_generalized_sq"
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test_failok+=" or TestF77ReturnCharacter"
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test_failok+=" or TestF90ReturnCharacter"
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%endif
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# missing instruction set
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%ifarch s390x
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test_failok+=" or test_truncate_f32"
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%endif
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%ifarch %{ix86}
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# (arm 32-bit seems okay here)
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# gh#numpy/numpy#18387
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# gh#numpy/numpy#18388
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test_failok+=" or test_float_remainder_overflow"
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%endif
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%ifarch %{ix86} %{arm32}
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# too much memory for 32bit
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test_failok+=" or test_identityless_reduction_huge_array"
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test_failok+=" or test_huge_vectordot"
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# invalid int type for 32bit
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test_failok+=" or (test_kind and test_all)"
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%endif
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%ifarch riscv64
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# These tests fail due to non-portable assumptions about the signbit of NaN
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# gh#numpy/numpy#8213
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echo "
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import sys
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import numpy
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numpy.test(label='full', verbose=2,
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extra_argv=['-v', '-n', 'auto', '-k'] + sys.argv[1:])
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r = numpy.test(label='full', verbose=2,
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extra_argv=['-v', '-n', 'auto', '-k'] + sys.argv[1:])
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sys.exit(0 if r else 1)
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" > runobstest.py
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%{python_expand # for all python3 flavors
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export PYTHONPATH=%{buildroot}%{$python_sitearch}
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export PYTHONDONTWRITEBYTECODE=1
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[ -n "$test_failok" ] && $python runobstest.py "${test_failok:4}" ||:
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$python runobstest.py "not (${test_failok:4})"
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# test_new_policy: duplicates test runs and output and does not follow our deselection
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$python runobstest.py "not (test_new_policy ${test_failok})"
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}
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popd
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@ -321,6 +347,8 @@ popd
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%python_alternative %{_bindir}/f2py
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%if "%{python_flavor}" == "python3" || "%{python_provides}" == "python3"
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%{_bindir}/f2py3
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%else
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%exclude %{_bindir}/f2py3
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%endif
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%{_bindir}/f2py%{python_bin_suffix}
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%{python_sitearch}/numpy/
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@ -336,6 +364,9 @@ popd
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%if "%{python_flavor}" == "python3" || "%{python_provides}" == "python3"
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%{p_bindir}/f2py
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%{p_bindir}/f2py3
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%else
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%exclude %{p_bindir}/f2py
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%exclude %{p_bindir}/f2py3
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%endif
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%{p_bindir}/f2py%{python_bin_suffix}
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%{p_python_sitearch}/numpy/
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