# # spec file for package python-numpy # # Copyright (c) 2021 SUSE LLC # # All modifications and additions to the file contributed by third parties # remain the property of their copyright owners, unless otherwise agreed # upon. The license for this file, and modifications and additions to the # file, is the same license as for the pristine package itself (unless the # license for the pristine package is not an Open Source License, in which # case the license is the MIT License). An "Open Source License" is a # license that conforms to the Open Source Definition (Version 1.9) # published by the Open Source Initiative. # Please submit bugfixes or comments via https://bugs.opensuse.org/ # %if 0%{?suse_version} > 1500 %bcond_without libalternatives %else %bcond_with libalternatives %endif %global flavor @BUILD_FLAVOR@%{nil} %define ver 1.21.0 %define _ver 1_21_0 %define pname python-numpy %define hpc_upcase_trans_hyph() %(echo %{**} | tr [a-z] [A-Z] | tr '-' '_') %if "%{flavor}" == "" %bcond_with hpc %bcond_with openblas %endif %if "%{flavor}" == "gnu-hpc" %bcond_without hpc %endif %if "%{flavor}" == "gnu7-hpc" %define c_f_ver 7 %bcond_without hpc %endif %if %{with hpc} %bcond_without openblas %endif %if 0%{?sle_version} == 120300 %{?with_openblas:ExclusiveArch: do_not_build} %endif %ifarch s390 s390x %{?with_openblas:ExclusiveArch: do_not_build} %endif %{?!python_module:%define python_module() python-%{**} python3-%{**}} %define skip_python2 1 %define skip_python36 1 %{?with_hpc:%{hpc_requires}} %bcond_with ringdisabled %if %{without hpc} %define package_name %{pname} %define p_python_sitearch %{python_sitearch} %define p_prefix %{_prefix} %define p_bindir %{_bindir} %else %{!?compiler_family:%global compiler_family gnu} %{hpc_init -c %{compiler_family} %{?c_f_ver:-v %{c_f_ver}} %{?mpi_ver:-V %{mpi_ver}}} %define package_name %{hpc_package_name %{_ver}} %define p_python_sitearch %{hpc_python_sitearch} %define p_prefix %{hpc_prefix} %define p_bindir %{hpc_bindir} # Magic for OBS Staging. Only build the flavors required by # other packages in the ring. %if %{with ringdisabled} ExclusiveArch: do_not_build %endif %endif Name: %{package_name} # set %%ver and %%_ver instead above Version: %ver Release: 0 Summary: NumPy array processing for numbers, strings, records and objects License: BSD-3-Clause URL: http://www.numpy.org/ Source: https://files.pythonhosted.org/packages/source/n/numpy/numpy-%{version}.zip Source99: python-numpy-rpmlintrc # PATCH-FIX-OPENSUSE numpy-buildfix.patch -- openSUSE-specific build fixes Patch0: numpy-buildfix.patch # PATCH-FIX-OPENSUSE numpy-1.9.0-remove-__declspec.patch -- fix for spurious compiler warnings that cause build failure Patch1: numpy-1.9.0-remove-__declspec.patch # PATCH-FIX-UPSTREAM 0001-BUG-Fix-infinite-loop-on-gcc11.patch Patch2: 0001-BUG-Fix-infinite-loop-on-gcc11.patch # PATCH-FIX-UPSTREAM numpy-pr19326-fix-subarray-segfault.patch -- gh#numpy/numpy#19326 Patch3: https://github.com/numpy/numpy/pull/19326.patch#/numpy-pr19326-fix-subarray-segfault.patch BuildRequires: %{python_module Cython >= 0.29.23} BuildRequires: %{python_module base >= 3.7} BuildRequires: %{python_module devel} BuildRequires: %{python_module hypothesis >= 6.12.0} BuildRequires: %{python_module pytest >= 6.2.4} BuildRequires: %{python_module pytest-xdist} BuildRequires: %{python_module setuptools} BuildRequires: %{python_module testsuite} BuildRequires: python-rpm-macros BuildRequires: unzip %if 0%{?suse_version} BuildRequires: fdupes %endif %if %{without hpc} %if 0%{?suse_version} BuildRequires: gcc-fortran %else BuildRequires: gcc-gfortran %endif %if %{with openblas} BuildRequires: openblas-devel > 0.3.4 %else BuildRequires: blas-devel BuildRequires: cblas-devel BuildRequires: lapack-devel # openblas has significantly better performance for some operations Recommends: libopenblas_pthreads0 %endif # Last version which packaged %%{_bindir}/f2py without update-alternatives # Protect it from substitution %define oldpy_numpy python-numpy Conflicts: %{oldpy_numpy} <= 1.12.0 %else BuildRequires: %{compiler_family}%{?c_f_ver}-compilers-hpc-macros-devel BuildRequires: libopenblas%{?hpc_ext}-%{compiler_family}%{?c_f_ver}-hpc-devel BuildRequires: lua-lmod BuildRequires: suse-hpc Requires: libopenblas%{?hpc_ext}-%{compiler_family}%{?c_f_ver}-hpc %if %{with libalternatives} Requires: alts %else Requires(post): update-alternatives Requires(postun):update-alternatives %endif %endif %python_subpackages %description NumPy is a general-purpose array-processing package designed to efficiently manipulate large multi-dimensional arrays of arbitrary records without sacrificing too much speed for small multi-dimensional arrays. NumPy is built on the Numeric code base and adds features introduced by numarray as well as an extended C-API and the ability to create arrays of arbitrary type which also makes NumPy suitable for interfacing with general-purpose data-base applications. There are also basic facilities for discrete fourier transform, basic linear algebra and random number generation. %{?with_hpc:%{hpc_python_master_package -L -a }} %package devel Summary: Development files for numpy applications Requires: %{name} = %{version} Requires: python-devel %if %{without hpc} %if %{with openblas} Requires: openblas-devel %else Requires: blas-devel Requires: cblas-devel Requires: lapack-devel %endif %else Requires: libopenblas%{?hpc_ext}-%{compiler_family}%{?c_f_ver}-hpc-devel %{hpc_requires_devel} %endif %description devel This package contains files for developing applications using numpy. %{?with_hpc:%{hpc_python_master_package devel -a }} %prep %autosetup -p1 -n numpy-%{version} # Fix non-executable scripts sed -i '1s/^#!.*$//' numpy/{compat/setup,random/_examples/cython/setup,distutils/{conv_template,cpuinfo,exec_command,from_template,setup,system_info},f2py/{__init__,auxfuncs,capi_maps,cb_rules,cfuncs,common_rules,crackfortran,diagnose,f2py2e,f90mod_rules,func2subr,rules,setup,use_rules},ma/{setup,bench},matrixlib/setup,setup,testing/{print_coercion_tables,setup}}.py sed -i '1s/^#!.*$//' numpy/random/_examples/cython/*.pyx # force cythonization rm PKG-INFO %build %define _lto_cflags %{nil} %if %{with hpc} %hpc_setup module load openblas export CFLAGS="$(pkg-config --cflags openblas) %{optflags} -fno-strict-aliasing" LIBS="$(pkg-config --libs openblas)" cat > site.cfg < %{buildroot}%{_datadir}/libalternatives/f2py/10%{$python_version_nodots}.conf %endif %endif %if 0%{?suse_version} %fdupes %{buildroot}%{p_prefix} %endif %if %{with hpc} %define hpc_module_pname ${python_flavor}-numpy %{python_expand # Don't package testsuite python_flavor=`cat _current_flavor` sitesearch_path=`$python -c "import sysconfig as s; print(s.get_paths(vars={'platbase':'%{hpc_prefix}','base':'%{hpc_prefix}'}).get('platlib'))"` rm -rf %{buildroot}${sitesearch_path}/numpy/{,core,distutils,f2py,fft,lib,linalg,ma,matrixlib,oldnumeric,polynomial,random,testing}/tests %hpc_write_modules_files #%%Module1.0##################################################################### proc ModulesHelp { } { puts stderr " " puts stderr "This module loads the %{pname} library built with the %{compiler_family} compiler" puts stderr "toolchain." puts stderr "\nVersion %{version}\n" } module-whatis "Name: %{pname} built with %{compiler_family} compiler" module-whatis "Version: %{version}" module-whatis "Category: python module" module-whatis "Description: %{SUMMARY:0}" module-whatis "URL %{url}" set version %{version} if [ expr [ module-info mode load ] || [module-info mode display ] ] { if { ![is-loaded intel] && ![is-loaded openblas] } { module load openblas } } prepend-path PATH %{hpc_bindir} prepend-path PYTHONPATH ${sitesearch_path} setenv %{hpc_upcase_trans_hyph %{pname}}_DIR %{hpc_prefix} setenv %{hpc_upcase_trans_hyph %{pname}}_BIN %{hpc_bindir} family "NumPy" EOF } %endif %check %if %{without hpc} export PATH="%{buildroot}%{_bindir}:$PATH" mkdir testing cp numpy/conftest.py testing/ pushd testing # flaky tests test_failok+=" or test_structured_object_indexing" test_failok+=" or test_structured_object_item_setting" # boo#1148173 gh#numpy/numpy#14438 %ifarch ppc64 ppc64le test_failok+=" or test_generalized_sq" %endif # these tests fail on big endian gh#numpy/numpy#11831 %ifarch s390x ppc ppc64 test_failok+=" or TestF77ReturnCharacter" test_failok+=" or TestF90ReturnCharacter" %endif %ifarch %ix86 # (arm 32-bit seems okay here) # gh#numpy/numpy#18387 test_failok+=" or test_pareto" # gh#numpy/numpy#18388 test_failok+=" or test_float_remainder_overflow" %endif %{python_expand # for all python3 flavors export PYTHONPATH=%{buildroot}%{$python_sitearch} export PYTHONDONTWRITEBYTECODE=1 $python -c 'from numpy import _pytesttester as ptt; ptt._show_numpy_info()' testcall="pytest-%{$python_bin_suffix} -n auto -c ../pytest.ini %{buildroot}%{$python_sitearch}/numpy" [ -n "$test_failok" ] && ${testcall} -k "${test_failok:4}" || true ${testcall} ${test_failok:+-k "not (${test_failok:4})"} rm -Rf %{buildroot}%{$python_sitearch}/numpy/.pytest_cache } popd %endif %if %{without hpc} %if %{with libalternatives} %pre # removing old update-alternatives entries if [ "$1" -gt 0 ] && [ -f %{_sbindir}/update-alternatives ] ; then %python_uninstall_alternative f2py fi %else %post %python_install_alternative f2py %postun %python_uninstall_alternative f2py %endif %endif %files %{python_files} %doc README.md THANKS.txt %if %{without hpc} %if ! 0%{with libalternatives} %python_alternative %{_bindir}/f2py %else %dir %{_datadir}/libalternatives %dir %{_datadir}/libalternatives/f2py %{_datadir}/libalternatives/f2py/10%python_version_nodots.conf %{_bindir}/f2py %{_bindir}/f2py-%python_version %endif %if "%{python_flavor}" == "python3" || "%{python_provides}" == "python3" %{_bindir}/f2py3 %endif %{_bindir}/f2py%{python_bin_suffix} %{python_sitearch}/numpy/ %{python_sitearch}/numpy-%{version}-py*.egg-info %license %{python_sitearch}/numpy/LICENSE.txt %exclude %{python_sitearch}/numpy/core/include/ %exclude %{python_sitearch}/numpy/distutils/mingw/*.c %exclude %{python_sitearch}/numpy/distutils/checks/*.c %exclude %{python_sitearch}/numpy/f2py/src/ %exclude %{python_sitearch}/numpy/core/lib/libnpymath.a %exclude %{python_sitearch}/numpy/random/lib/libnpyrandom.a %else %if "%{python_flavor}" == "python3" || "%{python_provides}" == "python3" %{p_bindir}/f2py %{p_bindir}/f2py3 %endif %{p_bindir}/f2py%{python_bin_suffix} %{p_python_sitearch}/numpy/ %{p_python_sitearch}/numpy-%{version}-py*.egg-info %license %{p_python_sitearch}/numpy/LICENSE.txt %exclude %{p_python_sitearch}/numpy/core/include/ %exclude %{p_python_sitearch}/numpy/core/lib/libnpymath.a %exclude %{p_python_sitearch}/numpy/random/lib/libnpyrandom.a %exclude %{p_python_sitearch}/numpy/distutils/mingw/*.c %exclude %{p_python_sitearch}/numpy/distutils/checks/*.c %exclude %{p_python_sitearch}/numpy/f2py/src/ %endif %if %{with hpc} %define hpc_module_pname %{python_flavor}-numpy %{hpc_modules_files} %{hpc_dirs} %dir %{hpc_bindir} %dir %{hpc_libdir}/python%{hpc_python_version} %dir %{p_python_sitearch} %endif %files %{python_files devel} %license LICENSE.txt %if %{without hpc} %{python_sitearch}/numpy/core/include/ %{python_sitearch}/numpy/distutils/mingw/*.c %{python_sitearch}/numpy/distutils/checks/*.c %{python_sitearch}/numpy/f2py/src/ %{python_sitearch}/numpy/core/lib/libnpymath.a %{python_sitearch}/numpy/random/lib/libnpyrandom.a %else %{p_python_sitearch}/numpy/core/include/ %{p_python_sitearch}/numpy/core/lib/libnpymath.a %{p_python_sitearch}/numpy/random/lib/libnpyrandom.a %{p_python_sitearch}/numpy/distutils/mingw/*.c %{p_python_sitearch}/numpy/distutils/checks/*.c %{p_python_sitearch}/numpy/f2py/src/ %endif %changelog