Matej Cepl
0b4f6d23fe
- Update to 1.21.2 * #19497: MAINT: set Python version for 1.21.x to <3.11 * #19533: BUG: Fix an issue wherein importing numpy.typing could raise * #19646: MAINT: Update Cython version for Python 3.10. * #19648: TST: Bump the python 3.10 test version from beta4 to rc1 * #19651: TST: avoid distutils.sysconfig in runtests.py * #19652: MAINT: add missing dunder method to nditer type hints * #19656: BLD, SIMD: Fix testing extra checks when -Werror isn't applicable... * #19657: BUG: Remove logical object ufuncs with bool output * #19658: MAINT: Include .coveragerc in source distributions to support... * #19659: BUG: Fix bad write in masked iterator output copy paths * #19660: ENH: Add support for windows on arm targets * #19661: BUG: add base to templated arguments for platlib * #19662: BUG,DEP: Non-default UFunc signature/dtype usage should be deprecated * #19666: MAINT: Add Python 3.10 to supported versions. * #19668: TST,BUG: Sanitize path-separators when running runtest.py * #19671: BLD: load extra flags when checking for libflame * #19676: BLD: update circleCI docker image * #19677: REL: Prepare for 1.21.2 release. - Release 1.21.1 * #19311: REV,BUG: Replace NotImplemented with typing.Any * #19324: MAINT: Fixed the return-dtype of ndarray.real and imag * #19330: MAINT: Replace "dtype[Any]" with dtype in the definiton of... * #19342: DOC: Fix some docstrings that crash pdf generation. * #19343: MAINT: bump scipy-mathjax * #19347: BUG: Fix arr.flat.index for large arrays and big-endian machines * #19348: ENH: add numpy.f2py.get_include function * #19349: BUG: Fix reference count leak in ufunc dtype handling * #19350: MAINT: Annotate missing attributes of np.number subclasses * #19351: BUG: Fix cast safety and comparisons for zero sized voids OBS-URL: https://build.opensuse.org/request/show/920368 OBS-URL: https://build.opensuse.org/package/show/devel:languages:python:numeric/python-numpy?expand=0&rev=95
352 lines
11 KiB
RPMSpec
352 lines
11 KiB
RPMSpec
#
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# spec file
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#
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# Copyright (c) 2021 SUSE LLC
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#
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# All modifications and additions to the file contributed by third parties
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# remain the property of their copyright owners, unless otherwise agreed
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# upon. The license for this file, and modifications and additions to the
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# file, is the same license as for the pristine package itself (unless the
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# license for the pristine package is not an Open Source License, in which
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# case the license is the MIT License). An "Open Source License" is a
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# license that conforms to the Open Source Definition (Version 1.9)
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# published by the Open Source Initiative.
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# Please submit bugfixes or comments via https://bugs.opensuse.org/
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#
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%global flavor @BUILD_FLAVOR@%{nil}
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%define ver 1.21.2
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%define _ver 1_21_2
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%define pname python-numpy
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%define hpc_upcase_trans_hyph() %(echo %{**} | tr [a-z] [A-Z] | tr '-' '_')
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%if "%{flavor}" == ""
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%bcond_with hpc
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%bcond_with openblas
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%endif
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%if "%{flavor}" == "gnu-hpc"
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%bcond_without hpc
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%endif
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%if "%{flavor}" == "gnu7-hpc"
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%define c_f_ver 7
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%bcond_without hpc
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%endif
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%if %{with hpc}
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%bcond_without openblas
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%endif
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%if 0%{?sle_version} == 120300
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%{?with_openblas:ExclusiveArch: do_not_build}
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%endif
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%ifarch s390 s390x
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%{?with_openblas:ExclusiveArch: do_not_build}
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%endif
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%{?!python_module:%define python_module() python-%{**} python3-%{**}}
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%define skip_python2 1
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%define skip_python36 1
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%{?with_hpc:%{hpc_requires}}
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%bcond_with ringdisabled
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%if %{without hpc}
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%define package_name %{pname}
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%define p_python_sitearch %{python_sitearch}
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%define p_prefix %{_prefix}
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%define p_bindir %{_bindir}
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%else
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%{!?compiler_family:%global compiler_family gnu}
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%{hpc_init -c %{compiler_family} %{?c_f_ver:-v %{c_f_ver}} %{?mpi_ver:-V %{mpi_ver}}}
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%define package_name %{hpc_package_name %{_ver}}
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%define p_python_sitearch %{hpc_python_sitearch}
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%define p_prefix %{hpc_prefix}
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%define p_bindir %{hpc_bindir}
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# Magic for OBS Staging. Only build the flavors required by
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# other packages in the ring.
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%if %{with ringdisabled}
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ExclusiveArch: do_not_build
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%endif
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%endif
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Name: %{package_name}
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# set %%ver and %%_ver instead above
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Version: %ver
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Release: 0
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Summary: NumPy array processing for numbers, strings, records and objects
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License: BSD-3-Clause
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URL: http://www.numpy.org/
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Source: https://files.pythonhosted.org/packages/source/n/numpy/numpy-%{version}.zip
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Source99: python-numpy-rpmlintrc
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# PATCH-FIX-OPENSUSE numpy-buildfix.patch -- openSUSE-specific build fixes
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Patch0: numpy-buildfix.patch
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# PATCH-FIX-OPENSUSE numpy-1.9.0-remove-__declspec.patch -- fix for spurious compiler warnings that cause build failure
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Patch1: numpy-1.9.0-remove-__declspec.patch
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BuildConflicts: gcc11 < 11.2
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BuildRequires: %{python_module Cython >= 0.29.24}
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BuildRequires: %{python_module base >= 3.7}
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BuildRequires: %{python_module devel}
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BuildRequires: %{python_module hypothesis >= 6.12.0}
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BuildRequires: %{python_module pytest >= 6.2.4}
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BuildRequires: %{python_module pytest-xdist}
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BuildRequires: %{python_module setuptools}
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BuildRequires: %{python_module testsuite}
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BuildRequires: python-rpm-macros
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BuildRequires: unzip
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%if 0%{?suse_version}
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BuildRequires: fdupes
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%endif
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%if %{without hpc}
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%if 0%{?suse_version}
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BuildRequires: gcc-fortran
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%else
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BuildRequires: gcc-gfortran
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%endif
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%if %{with openblas}
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BuildRequires: openblas-devel > 0.3.4
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%else
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BuildRequires: blas-devel
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BuildRequires: cblas-devel
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BuildRequires: lapack-devel
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# openblas has significantly better performance for some operations
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Recommends: libopenblas_pthreads0
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%endif
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# Last version which packaged %%{_bindir}/f2py without update-alternatives
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# Protect it from substitution
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%define oldpy_numpy python-numpy
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Conflicts: %{oldpy_numpy} <= 1.12.0
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%else
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BuildRequires: %{compiler_family}%{?c_f_ver}-compilers-hpc-macros-devel
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BuildRequires: libopenblas%{?hpc_ext}-%{compiler_family}%{?c_f_ver}-hpc-devel
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BuildRequires: lua-lmod
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BuildRequires: suse-hpc
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Requires: libopenblas%{?hpc_ext}-%{compiler_family}%{?c_f_ver}-hpc
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Requires(post): update-alternatives
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Requires(postun):update-alternatives
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%endif
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%python_subpackages
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%description
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NumPy is a general-purpose array-processing package designed to
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efficiently manipulate large multi-dimensional arrays of arbitrary
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records without sacrificing too much speed for small multi-dimensional
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arrays. NumPy is built on the Numeric code base and adds features
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introduced by numarray as well as an extended C-API and the ability to
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create arrays of arbitrary type which also makes NumPy suitable for
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interfacing with general-purpose data-base applications.
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There are also basic facilities for discrete fourier transform,
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basic linear algebra and random number generation.
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%{?with_hpc:%{hpc_python_master_package -L -a }}
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%package devel
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Summary: Development files for numpy applications
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Requires: %{name} = %{version}
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Requires: python-devel
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%if %{without hpc}
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%if %{with openblas}
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Requires: openblas-devel
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%else
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Requires: blas-devel
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Requires: cblas-devel
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Requires: lapack-devel
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%endif
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%else
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Requires: libopenblas%{?hpc_ext}-%{compiler_family}%{?c_f_ver}-hpc-devel
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%{hpc_requires_devel}
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%endif
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%description devel
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This package contains files for developing applications using numpy.
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%{?with_hpc:%{hpc_python_master_package devel -a }}
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%prep
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%autosetup -p1 -n numpy-%{version}
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# Fix non-executable scripts
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sed -i '1s/^#!.*$//' numpy/{compat/setup,random/_examples/cython/setup,distutils/{conv_template,cpuinfo,exec_command,from_template,setup,system_info},f2py/{__init__,auxfuncs,capi_maps,cb_rules,cfuncs,common_rules,crackfortran,diagnose,f2py2e,f90mod_rules,func2subr,rules,setup,use_rules},ma/{setup,bench},matrixlib/setup,setup,testing/{print_coercion_tables,setup}}.py
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sed -i '1s/^#!.*$//' numpy/random/_examples/cython/*.pyx
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# force cythonization
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rm PKG-INFO
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%build
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%define _lto_cflags %{nil}
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%if %{with hpc}
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%hpc_setup
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module load openblas
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export CFLAGS="$(pkg-config --cflags openblas) %{optflags} -fno-strict-aliasing" LIBS="$(pkg-config --libs openblas)"
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cat > site.cfg <<EOF
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[openblas]
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libraries = openblas
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library_dirs = $OPENBLAS_LIB
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include_dirs = $OPENBLAS_INC
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EOF
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%else
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export CFLAGS="%{optflags} -fno-strict-aliasing"
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%endif
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%python_build
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%install
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%{?with_hpc:%hpc_setup}
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%{?with_hpc:module load openblas}
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%python_exec setup.py install --prefix=%{p_prefix} --root=%{buildroot}
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%if !%{with hpc}
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%python_clone -a %{buildroot}%{_bindir}/f2py
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%endif
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%if 0%{?suse_version}
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%fdupes %{buildroot}%{p_prefix}
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%endif
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%if %{with hpc}
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%define hpc_module_pname ${python_flavor}-numpy
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%{python_expand # Don't package testsuite
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python_flavor=`cat _current_flavor`
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sitesearch_path=`$python -c "import sysconfig as s; print(s.get_paths(vars={'platbase':'%{hpc_prefix}','base':'%{hpc_prefix}'}).get('platlib'))"`
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rm -rf %{buildroot}${sitesearch_path}/numpy/{,core,distutils,f2py,fft,lib,linalg,ma,matrixlib,oldnumeric,polynomial,random,testing}/tests
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%hpc_write_modules_files
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#%%Module1.0#####################################################################
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proc ModulesHelp { } {
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puts stderr " "
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puts stderr "This module loads the %{pname} library built with the %{compiler_family} compiler"
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puts stderr "toolchain."
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puts stderr "\nVersion %{version}\n"
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}
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module-whatis "Name: %{pname} built with %{compiler_family} compiler"
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module-whatis "Version: %{version}"
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module-whatis "Category: python module"
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module-whatis "Description: %{SUMMARY:0}"
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module-whatis "URL %{url}"
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set version %{version}
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if [ expr [ module-info mode load ] || [module-info mode display ] ] {
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if { ![is-loaded intel] && ![is-loaded openblas] } {
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module load openblas
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}
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}
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prepend-path PATH %{hpc_bindir}
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prepend-path PYTHONPATH ${sitesearch_path}
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setenv %{hpc_upcase_trans_hyph %{pname}}_DIR %{hpc_prefix}
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setenv %{hpc_upcase_trans_hyph %{pname}}_BIN %{hpc_bindir}
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family "NumPy"
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EOF
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}
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%endif
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%check
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%if %{without hpc}
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export PATH="%{buildroot}%{_bindir}:$PATH"
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mkdir testing
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cp numpy/conftest.py testing/
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pushd testing
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# flaky tests
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test_failok+=" or test_structured_object_indexing"
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test_failok+=" or test_structured_object_item_setting"
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# boo#1148173 gh#numpy/numpy#14438
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%ifarch ppc64 ppc64le
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test_failok+=" or test_generalized_sq"
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%endif
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# these tests fail on big endian gh#numpy/numpy#11831
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%ifarch s390x ppc ppc64
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test_failok+=" or TestF77ReturnCharacter"
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test_failok+=" or TestF90ReturnCharacter"
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%endif
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%ifarch %ix86
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# (arm 32-bit seems okay here)
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# gh#numpy/numpy#18387
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test_failok+=" or test_pareto"
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# gh#numpy/numpy#18388
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test_failok+=" or test_float_remainder_overflow"
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%endif
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%{python_expand # for all python3 flavors
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export PYTHONPATH=%{buildroot}%{$python_sitearch}
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export PYTHONDONTWRITEBYTECODE=1
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$python -c 'from numpy import _pytesttester as ptt; ptt._show_numpy_info()'
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testcall="pytest-%{$python_bin_suffix} -n auto -c ../pytest.ini %{buildroot}%{$python_sitearch}/numpy"
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[ -n "$test_failok" ] && ${testcall} -k "${test_failok:4}" || true
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${testcall} ${test_failok:+-k "not (${test_failok:4})"}
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rm -Rf %{buildroot}%{$python_sitearch}/numpy/.pytest_cache
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}
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popd
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%endif
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%if %{without hpc}
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%post
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%python_install_alternative f2py
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%postun
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%python_uninstall_alternative f2py
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%endif
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%files %{python_files}
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%doc README.md THANKS.txt
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%if %{without hpc}
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%python_alternative %{_bindir}/f2py
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%if "%{python_flavor}" == "python3" || "%{python_provides}" == "python3"
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%{_bindir}/f2py3
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%endif
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%{_bindir}/f2py%{python_bin_suffix}
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%{python_sitearch}/numpy/
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%{python_sitearch}/numpy-%{version}-py*.egg-info
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%license %{python_sitearch}/numpy/LICENSE.txt
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%exclude %{python_sitearch}/numpy/core/include/
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%exclude %{python_sitearch}/numpy/distutils/mingw/*.c
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%exclude %{python_sitearch}/numpy/distutils/checks/*.c
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%exclude %{python_sitearch}/numpy/f2py/src/
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%exclude %{python_sitearch}/numpy/core/lib/libnpymath.a
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%exclude %{python_sitearch}/numpy/random/lib/libnpyrandom.a
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%else
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%if "%{python_flavor}" == "python3" || "%{python_provides}" == "python3"
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%{p_bindir}/f2py
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%{p_bindir}/f2py3
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%endif
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%{p_bindir}/f2py%{python_bin_suffix}
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%{p_python_sitearch}/numpy/
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%{p_python_sitearch}/numpy-%{version}-py*.egg-info
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%license %{p_python_sitearch}/numpy/LICENSE.txt
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%exclude %{p_python_sitearch}/numpy/core/include/
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%exclude %{p_python_sitearch}/numpy/core/lib/libnpymath.a
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%exclude %{p_python_sitearch}/numpy/random/lib/libnpyrandom.a
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%exclude %{p_python_sitearch}/numpy/distutils/mingw/*.c
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%exclude %{p_python_sitearch}/numpy/distutils/checks/*.c
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%exclude %{p_python_sitearch}/numpy/f2py/src/
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%endif
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%if %{with hpc}
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%define hpc_module_pname %{python_flavor}-numpy
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%{hpc_modules_files}
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%{hpc_dirs}
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%dir %{hpc_bindir}
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%dir %{hpc_libdir}/python%{hpc_python_version}
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%dir %{p_python_sitearch}
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%endif
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%files %{python_files devel}
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%license LICENSE.txt
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%if %{without hpc}
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%{python_sitearch}/numpy/core/include/
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%{python_sitearch}/numpy/distutils/mingw/*.c
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%{python_sitearch}/numpy/distutils/checks/*.c
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%{python_sitearch}/numpy/f2py/src/
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%{python_sitearch}/numpy/core/lib/libnpymath.a
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%{python_sitearch}/numpy/random/lib/libnpyrandom.a
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%else
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%{p_python_sitearch}/numpy/core/include/
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%{p_python_sitearch}/numpy/core/lib/libnpymath.a
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%{p_python_sitearch}/numpy/random/lib/libnpyrandom.a
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%{p_python_sitearch}/numpy/distutils/mingw/*.c
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%{p_python_sitearch}/numpy/distutils/checks/*.c
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%{p_python_sitearch}/numpy/f2py/src/
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%endif
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%changelog
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