Dirk Mueller
cd26b8ccbb
- Update to 0.6.1
* Remove affinites from TSNE construction, allow custom
affinities and initialization in .fit method. This improves the
API when dealing with non-tabular data. This is not backwards
compatible.
* Add metric="precomputed". This includes the addition of
openTSNE.nearest_neighbors.PrecomputedDistanceMatrix and
openTSNE.nearest_neighbors.PrecomputedNeighbors.
* Add knn_index parameter to openTSNE.affinity classes.
* Add (less-than-ideal) workaround for pickling Annoy objects.
* Extend the range of recommended FFTW boxes up to 1000.
* Remove deprecated openTSNE.nearest_neighbors.BallTree.
* Remove deprecated openTSNE.callbacks.ErrorLogger.
* Remove deprecated TSNE.neighbors_method property.
* Add and set as default negative_gradient_method="auto".
- Skip building on python310: gh#pavlin-policar/openTSNE#205
OBS-URL: https://build.opensuse.org/request/show/951592
OBS-URL: https://build.opensuse.org/package/show/devel:languages:python:numeric/python-openTSNE?expand=0&rev=5
77 lines
2.4 KiB
RPMSpec
77 lines
2.4 KiB
RPMSpec
#
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# spec file for package python-openTSNE
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#
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# Copyright (c) 2022 SUSE LLC
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#
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# All modifications and additions to the file contributed by third parties
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# remain the property of their copyright owners, unless otherwise agreed
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# upon. The license for this file, and modifications and additions to the
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# file, is the same license as for the pristine package itself (unless the
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# license for the pristine package is not an Open Source License, in which
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# case the license is the MIT License). An "Open Source License" is a
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# license that conforms to the Open Source Definition (Version 1.9)
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# published by the Open Source Initiative.
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# Please submit bugfixes or comments via https://bugs.opensuse.org/
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#
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%{?!python_module:%define python_module() python3-%{**}}
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%define skip_python2 1
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# not compatile with Python 3.10 API: https://github.com/pavlin-policar/openTSNE/issues/205
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%define skip_python310 1
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Name: python-openTSNE
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Version: 0.6.1
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Release: 0
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Summary: Extensible, parallel implementations of t-SNE
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License: BSD-3-Clause
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URL: https://github.com/pavlin-policar/openTSNE
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# tests are not packaged in the PyPI sdist, use GitHub instead
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Source: %{url}/archive/v%{version}.tar.gz#/openTSNE-%{version}-gh.tar.gz
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Patch0: python-openTSNE-disable-CPU-autodetection.patch
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BuildRequires: %{python_module devel >= 3.7}
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BuildRequires: %{python_module numpy-devel >= 1.16.6}
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BuildRequires: %{python_module scikit-learn >= 0.20}
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BuildRequires: %{python_module scipy}
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BuildRequires: %{python_module setuptools}
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BuildRequires: c++_compiler
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BuildRequires: fftw3-devel
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BuildRequires: python-rpm-macros
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# SECTION test requirements
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BuildRequires: %{python_module pytest}
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# /SECTION
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BuildRequires: fdupes
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Requires: python-numpy >= 1.16.6
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Requires: python-scikit-learn >= 0.20
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Requires: python-scipy
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Suggests: python-hnswlib
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Suggests: python-pynndescent
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Provides: python-fastTSNE = %{version}
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Obsoletes: python-fastTSNE < %{version}
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%python_subpackages
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%description
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Extensible, parallel implementations of t-SNE
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%prep
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%autosetup -p1 -n openTSNE-%{version}
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%build
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export CFLAGS="%{optflags}"
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%python_build
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%install
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%python_install
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%python_expand %fdupes %{buildroot}%{$python_sitearch}
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%check
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%pytest_arch --import-mode append
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%files %{python_files}
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%doc README.rst
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%license LICENSE
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%{python_sitearch}/openTSNE
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%{python_sitearch}/openTSNE-%{version}*-info
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%changelog
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