Accepting request 872216 from home:bnavigator:branches:devel:languages:python:numeric

- Update to version 1.2.2
  * https://pandas.pydata.org/docs/whatsnew/v1.2.2.html
  * fixed regressions and bugfixes
- Update to version 1.2.1
  * https://pandas.pydata.org/docs/whatsnew/v1.2.1.html
  * fixed regressions and bugfixes
  * Calling NumPy ufuncs on non-aligned DataFrames
  * The deprecated attributes _AXIS_NAMES and _AXIS_NUMBERS of 
    DataFrame and Series will no longer show up in dir or inspect.
    getmembers calls (GH38740)
  * Bumped minimum fastparquet version to 0.4.0 to avoid 
    AttributeError from numba (GH38344)
  * Bumped minimum pymysql version to 0.8.1 to avoid test failures 
    (GH38344)
  * Added reference to backwards incompatible check_freq arg of 
    testing.assert_frame_equal() and testing.assert_series_equal() 
    in pandas 1.1.0 whats new (GH34050)
- Update to version 1.2.0
  * https://pandas.pydata.org/docs/whatsnew/v1.2.0.html
  * WARNING:   
      The xlwt package for writing old-style .xls excel files is
    no longer maintained. The xlrd package is now only for reading 
    old-style .xls files.
      Previously, the default argument engine=None to read_excel() 
    would result in using the xlrd engine in many cases, including 
    new Excel 2007+ (.xlsx) files. If openpyxl is installed, many 
    of these cases will now default to using the openpyxl engine. 
    See the read_excel() documentation for more details.
      Thus, it is strongly encouraged to install openpyxl to read 
    Excel 2007+ (.xlsx) files. Please do not report issues when 
    using ``xlrd`` to read ``.xlsx`` files. This is no longer 
    supported, switch to using openpyxl instead.    
      Attempting to use the xlwt engine will raise a FutureWarning 
    unless the option io.excel.xls.writer is set to "xlwt". While 
    this option is now deprecated and will also raise a     
    FutureWarning, it can be globally set and the warning 
    suppressed. Users are recommended to write .xlsx files using 
    the openpyxl engine instead.
  Enhancements
  * Optionally disallow duplicate labels
  * Passing arguments to fsspec backends
  * Support for binary file handles in to_csv
  * Support for short caption and table position in to_latex
  * Change in default floating precision for read_csv and 
    read_table
  * Experimental nullable data types for float data
  * Index/column name preservation when aggregating
  * GroupBy supports EWM operations directly
  Deprecations
  * https://pandas.pydata.org/docs/whatsnew/v1.2.0.html#deprecations
- Skip python36 build: New minimum supported Python is 3.7.1
- Only Suggest instead of Recommend optional dependencies. Nobody
  wants to pull in all of those packages by default.
- Remove pandas-pytest.ini
- Rework test deselection
- Limit to 4 pytest-xdist workers, as collection consumes a lot of
  memory

OBS-URL: https://build.opensuse.org/request/show/872216
OBS-URL: https://build.opensuse.org/package/show/devel:languages:python:numeric/python-pandas?expand=0&rev=56

_constraints

@@ -3,5 +3,6 @@
     <physicalmemory>
       <size unit="M">8000</size>
     </physicalmemory>
+    <processors>4</processors>
   </hardware>  
 </constraints>

pandas-1.1.4.tar.gz

@@ -1,3 +0,0 @@
-version https://git-lfs.github.com/spec/v1
-oid sha256:a979d0404b135c63954dea79e6246c45dd45371a88631cdbb4877d844e6de3b6
-size 5226971

pandas-1.2.2.tar.gz

@@ -0,0 +1,3 @@
+version https://git-lfs.github.com/spec/v1
+oid sha256:14ed84b463e9b84c8ff9308a79b04bf591ae3122a376ee0f62c68a1bd917a773
+size 5463571

pandas-pytest.ini

@@ -1,13 +0,0 @@
-[pytest]
-minversion = 4.0.2
-markers = 
-        single: mark a test as single cpu only
-        slow: mark a test as slow
-        network: mark a test as network
-        db: tests requiring a database (mysql or postgres)
-        high_memory: mark a test as a high-memory only
-        clipboard: mark a pd.read_clipboard test
-filterwarnings = 
-        error:Sparse:FutureWarning
-        error:The SparseArray:FutureWarning
-junit_family = xunit2

python-pandas.changes

@@ -1,3 +1,64 @@
+-------------------------------------------------------------------
+Sun Feb 14 20:53:06 UTC 2021 - Ben Greiner <code@bnavigator.de>
+
+- Update to version 1.2.2
+  * https://pandas.pydata.org/docs/whatsnew/v1.2.2.html
+  * fixed regressions and bugfixes
+- Update to version 1.2.1
+  * https://pandas.pydata.org/docs/whatsnew/v1.2.1.html
+  * fixed regressions and bugfixes
+  * Calling NumPy ufuncs on non-aligned DataFrames
+  * The deprecated attributes _AXIS_NAMES and _AXIS_NUMBERS of 
+    DataFrame and Series will no longer show up in dir or inspect.
+    getmembers calls (GH38740)
+  * Bumped minimum fastparquet version to 0.4.0 to avoid 
+    AttributeError from numba (GH38344)
+  * Bumped minimum pymysql version to 0.8.1 to avoid test failures 
+    (GH38344)
+  * Added reference to backwards incompatible check_freq arg of 
+    testing.assert_frame_equal() and testing.assert_series_equal() 
+    in pandas 1.1.0 whats new (GH34050)
+- Update to version 1.2.0
+  * https://pandas.pydata.org/docs/whatsnew/v1.2.0.html
+  * WARNING:   
+      The xlwt package for writing old-style .xls excel files is
+    no longer maintained. The xlrd package is now only for reading 
+    old-style .xls files.
+      Previously, the default argument engine=None to read_excel() 
+    would result in using the xlrd engine in many cases, including 
+    new Excel 2007+ (.xlsx) files. If openpyxl is installed, many 
+    of these cases will now default to using the openpyxl engine. 
+    See the read_excel() documentation for more details.
+      Thus, it is strongly encouraged to install openpyxl to read 
+    Excel 2007+ (.xlsx) files. Please do not report issues when 
+    using ``xlrd`` to read ``.xlsx`` files. This is no longer 
+    supported, switch to using openpyxl instead.    
+      Attempting to use the xlwt engine will raise a FutureWarning 
+    unless the option io.excel.xls.writer is set to "xlwt". While 
+    this option is now deprecated and will also raise a     
+    FutureWarning, it can be globally set and the warning 
+    suppressed. Users are recommended to write .xlsx files using 
+    the openpyxl engine instead.
+  Enhancements
+  * Optionally disallow duplicate labels
+  * Passing arguments to fsspec backends
+  * Support for binary file handles in to_csv
+  * Support for short caption and table position in to_latex
+  * Change in default floating precision for read_csv and 
+    read_table
+  * Experimental nullable data types for float data
+  * Index/column name preservation when aggregating
+  * GroupBy supports EWM operations directly
+  Deprecations
+  * https://pandas.pydata.org/docs/whatsnew/v1.2.0.html#deprecations
+- Skip python36 build: New minimum supported Python is 3.7.1
+- Only Suggest instead of Recommend optional dependencies. Nobody
+  wants to pull in all of those packages by default.
+- Remove pandas-pytest.ini
+- Rework test deselection
+- Limit to 4 pytest-xdist workers, as collection consumes a lot of
+  memory
+
 -------------------------------------------------------------------
 Fri Oct 30 22:30:53 UTC 2020 - Arun Persaud <arun@gmx.de>
 

python-pandas.spec

@@ -1,7 +1,7 @@
 #
 # spec file for package python-pandas
 #
-# Copyright (c) 2020 SUSE LLC
+# Copyright (c) 2021 SUSE LLC
 #
 # All modifications and additions to the file contributed by third parties
 # remain the property of their copyright owners, unless otherwise agreed
@@ -18,6 +18,7 @@
 
 %{?!python_module:%define python_module() python-%{**} python3-%{**}}
 %define         skip_python2 1
+%define         skip_python36 1
 %global flavor @BUILD_FLAVOR@%{nil}
 %if "%{flavor}" == "test"
 %define psuffix -test
@@ -27,76 +28,76 @@
 %bcond_with test
 %endif
 Name:           python-pandas%{psuffix}
-Version:        1.1.4
+Version:        1.2.2
 Release:        0
 Summary:        Python data structures for data analysis, time series, and statistics
 License:        BSD-3-Clause
 Group:          Development/Libraries/Python
 URL:            https://pandas.pydata.org/
 Source0:        https://files.pythonhosted.org/packages/source/p/pandas/pandas-%{version}.tar.gz
-Source99:       pandas-pytest.ini
+BuildRequires:  %{python_module Cython >= 0.29.21}
-BuildRequires:  %{python_module Cython >= 0.28.2}
-# test requirements
 BuildRequires:  %{python_module Jinja2}
-BuildRequires:  %{python_module devel}
+BuildRequires:  %{python_module devel >= 3.7.1}
-BuildRequires:  %{python_module numpy >= 1.15.4}
+BuildRequires:  %{python_module numpy >= 1.16.5}
-BuildRequires:  %{python_module numpy-devel >= 1.15.4}
+BuildRequires:  %{python_module numpy-devel >= 1.16.5}
-BuildRequires:  %{python_module openpyxl}
+BuildRequires:  %{python_module python-dateutil >= 2.7.3}
-BuildRequires:  %{python_module pyperclip}
+BuildRequires:  %{python_module pytz >= 2017.3}
 BuildRequires:  %{python_module setuptools >= 24.2.0}
 BuildRequires:  fdupes
 BuildRequires:  gcc-c++
 BuildRequires:  python-rpm-macros
-Requires:       python-Cython >= 0.28.2
+Requires:       python-numpy >= 1.16.5
-Requires:       python-numpy >= 1.15.4
 Requires:       python-python-dateutil >= 2.7.3
-Requires:       python-pytz >= 2015.4
+Requires:       python-pytz >= 2017.3
+Recommends:     python-numexpr >= 2.6.8
 Recommends:     python-Bottleneck >= 1.2.1
-Recommends:     python-Jinja2
+Suggests:       python-beautifulsoup4 >= 4.6.0
-Recommends:     python-PyMySQL >= 0.7.11
+Suggests:       python-blosc >= 1.17.0
-Recommends:     python-QtPy
+Suggests:       python-fastparquet >= 0.4.0
-Recommends:     python-SQLAlchemy >= 1.1.4
+Suggests:       python-fsspec >= 0.7.4
-Recommends:     python-XlsxWriter >= 0.9.8
+Suggests:       python-gcsfs >= 0.6.0
-Recommends:     python-beautifulsoup4 >= 4.6.0
+Suggests:       python-html5lib >= 1.0.1
-Recommends:     python-blosc
+Suggests:       python-Jinja2 >= 2.10
-Recommends:     python-fastparquet >= 0.2.1
+Suggests:       python-lxml >= 4.3.0
-Recommends:     python-gcsfs >= 0.6.0
+Suggests:       python-matplotlib >= 2.2.3
-Recommends:     python-html5lib
+Suggests:       python-numba >= 0.46.0
-Recommends:     python-lxml >= 3.8.0
+Suggests:       python-openpyxl >= 2.6.0
-Recommends:     python-matplotlib >= 2.2.2
+Suggests:       python-pandas-gbq >= 0.12.0
-Recommends:     python-numexpr >= 2.6.2
+Suggests:       python-psycopg2 >= 2.7
-Recommends:     python-openpyxl >= 2.4.8
+Suggests:       python-pyarrow >= 0.15.0
-Recommends:     python-pandas-gbq >= 1.2.0
+Suggests:       python-PyMySQL >= 0.8.1
-Recommends:     python-psycopg2
+Suggests:       python-pyreadstat
-Recommends:     python-pyarrow >= 0.9.0
+Suggests:       python-qt5
-Recommends:     python-pyperclip
+Suggests:       python-QtPy
-Recommends:     python-pyreadstat
+Suggests:       python-s3fs >= 0.4.0
-Recommends:     python-qt5
+Suggests:       python-scipy >= 1.12.0
-Recommends:     python-scipy >= 1.2.0
+Suggests:       python-SQLAlchemy >= 1.3.0
-Recommends:     python-tables >= 3.4.3
+Suggests:       python-tables >= 3.5.1
-Recommends:     python-xarray >= 0.8.2
+Suggests:       python-tabulate >= 0.8.3
-Recommends:     python-xlrd >= 1.1.0
+Suggests:       python-xarray >= 0.8.2
-Recommends:     python-xlwt >= 1.2.0
+Suggests:       python-xlrd >= 1.2.0
-Recommends:     python-zlib
+Suggests:       python-xlsb >= 1.0.6
-Recommends:     xclip
+Suggests:       python-XlsxWriter >= 1.0.2
-Recommends:     xsel
+Suggests:       python-zlib
+Suggests:       xclip
+Suggests:       xsel
 Obsoletes:      python-pandas-doc < %{version}
 Provides:       python-pandas-doc = %{version}
 %if %{with test}
+BuildRequires:  %{python_module Bottleneck >= 1.2.1}
 BuildRequires:  %{python_module SQLAlchemy >= 1.1.4}
 BuildRequires:  %{python_module XlsxWriter >= 0.9.8}
 BuildRequires:  %{python_module beautifulsoup4 >= 4.6.0}
 BuildRequires:  %{python_module hypothesis}
-BuildRequires:  %{python_module lxml >= 3.8.0}
+BuildRequires:  %{python_module lxml >= 4.3.0}
-BuildRequires:  %{python_module openpyxl >= 2.4.8}
+BuildRequires:  %{python_module numexpr >= 2.6.8}
+BuildRequires:  %{python_module openpyxl >= 2.6.0}
 BuildRequires:  %{python_module pandas = %{version}}
-BuildRequires:  %{python_module pytest >= 4.0.2}
+BuildRequires:  %{python_module pytest >= 5.0.1}
 BuildRequires:  %{python_module pytest-mock}
 BuildRequires:  %{python_module pytest-xdist}
-BuildRequires:  %{python_module python-dateutil >= 2.7.3}
+BuildRequires:  %{python_module xlrd >= 1.2.0}
-BuildRequires:  %{python_module pytz >= 2015.4}
+BuildRequires:  xclip
-BuildRequires:  %{python_module xlrd >= 1.1.0}
-BuildRequires:  %{python_module xlwt >= 1.2.0}
 BuildRequires:  xvfb-run
 %endif
 %python_subpackages
@@ -123,8 +124,6 @@ export CFLAGS="%{optflags} -fno-strict-aliasing"
 %python_install
 %{python_expand sed -i -e 's|"python", "-c",|"%{__$python}", "-c",|' %{buildroot}%{$python_sitearch}/pandas/tests/io/test_compression.py
 %fdupes %{buildroot}%{$python_sitearch}
-# can be removed for pandas >= 1.1 https://github.com/pandas-dev/pandas/pull/35146
-install %{SOURCE99} %{buildroot}%{$python_sitearch}/pandas/pytest.ini
 }
 %endif
 
@@ -138,29 +137,39 @@ export PYTHONDONTWRITEBYTECODE=1
 # https://github.com/pytest-dev/pytest/issues/920
 # https://github.com/pytest-dev/pytest/issues/1075
 export PYTHONHASHSEED=1
-# tries to compile stuff in buildroot test_oo_optimizable
+# tries to compile stuff in system sitearch
 SKIP_TESTS+=" or test_oo_optimizable"
-# tries to import system pandas, not the freshly build on
+# dtypes not as expected
-SKIP_TESTS+=" or test_missing_required_dependency"
+# https://github.com/pandas-dev/pandas/issues/39096
+# https://github.com/pandas-dev/pandas/issues/36579
+SKIP_TESTS+=" or (test_misc and test_memory_usage and series and empty and index)"
 %ifarch %{ix86}
-# https://github.com/pandas-dev/pandas/issues/29712
-SKIP_TESTS+=" or test_raw_roundtrip"
 # overflows on i586
 SKIP_TESTS+=" or test_encode_non_c_locale"
 # fails on i586 (was gcc10-skip-one-test.patch)
 SKIP_TESTS+=" or test_merge_on_ints_floats_warning"
 %endif
+if [ $(getconf LONG_BIT) -eq 32 ]; then
 # https://github.com/pandas-dev/pandas/issues/31856
-[ $(getconf LONG_BIT) = "32" ] && SKIP_TESTS+=" or test_maybe_promote_int_with_int"
+SKIP_TESTS+=" or test_maybe_promote_int_with_int"
+# rounding error
+SKIP_TESTS+=" or (test_rolling_quantile_interpolation_options and data1 and linear and 0.1)"
+fi
 %ifnarch x86_64
 # run the slow tests only on x86_64
 %define test_fast --skip-slow --skip-db
 %endif
 %{python_expand $python -c 'import pandas; print(pandas.__path__); print(pandas.show_versions())'
+# -n 4: The test collection consumes a lot of memory per worker. Sync with constraints file
+# cache: can't just say no cacheprovider, because one test checks for the --lf option of pytest-cache
+# --skip-* arguments: Upstreams custom way to skip marked tests. These do not use pytest.mark.
+# clipboard marker: not set up properly in build service
 # need to specify test path directly instead of --pyargs pandas in order
-# to find pytest.ini and all conftest.py files
+# to find all conftest.py files https://github.com/pytest-dev/pytest/issues/1596
-xvfb-run pytest-%{$python_bin_suffix} -v -n auto %{?test_fast} \
+xvfb-run pytest-%{$python_bin_suffix} -v -n 4 \
-                                      -p no:cacheprovider \
+                                      -o cache_dir=$PWD/.pytest_cache --cache-clear \
+                                      --skip-network %{?test_fast} \
+                                      -m "not clipboard" \
                                       -k "not (${SKIP_TESTS:4})" \
                                       %{$python_sitearch}/pandas
 }