2019-12-03 15:54:07 +00:00
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#
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# spec file for package python-pomegranate
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#
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2021-02-12 14:56:14 +00:00
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# Copyright (c) 2021 SUSE LLC
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2019-12-03 15:54:07 +00:00
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#
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# All modifications and additions to the file contributed by third parties
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# remain the property of their copyright owners, unless otherwise agreed
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# upon. The license for this file, and modifications and additions to the
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# file, is the same license as for the pristine package itself (unless the
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# license for the pristine package is not an Open Source License, in which
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# case the license is the MIT License). An "Open Source License" is a
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# license that conforms to the Open Source Definition (Version 1.9)
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# published by the Open Source Initiative.
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# Please submit bugfixes or comments via https://bugs.opensuse.org/
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#
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%{?!python_module:%define python_module() python-%{**} python3-%{**}}
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2021-02-12 14:56:14 +00:00
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%define skip_python36 1
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2019-12-03 15:54:07 +00:00
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Name: python-pomegranate
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Accepting request 761206 from home:TheBlackCat:branches:devel:languages:python:numeric
- Update to Version 0.12.0
+ Highlights
* MarkovNetwork models have been added in and include both inference and structure learning.
* Support for Python 2 has been depricated.
* Markov network, data generator, and callback tutorials have been added in
* A robust `from_json` method has been added in to __init__.py that can deserialize JSONs from any pomegranate model.
+ MarkovNetwork
* MarkovNetwork models have been added in as a new probabilistic model.
* Loopy belief propagation inference has been added in using the FactorGraph backend
* Structure learning has been added in using Chow-Liu trees
+ BayesianNetwork
* Chow-Liu tree building has been sped up slightly, courtesy of @alexhenrie
* Chow-Liu tree building was further sped up by almost an order of magnitude
* Constraint Graphs no longer fail when passing in graphs with self loops, courtesy of @alexhenrie
+ BayesClassifier
* Updated the `from_samples` method to accept BayesianNetwork as an emission. This will build one Bayesian network for each class and use them as the emissions.
+ Distributions
* Added a warning to DiscreteDistribution when the user passes in an empty dictionary.
* Fixed the sampling procedure for JointProbabilityTables.
* GammaDistributions should have their shape issue resolved
* The documentation for BetaDistributions has been updated to specify that it is a Beta-Bernoulli distribution.
+ io
* New file added, io.py, that contains data generators that can be operated on
* Added DataGenerator, DataFrameGenerator, and a BaseGenerator class to inherit from
+ HiddenMarkovModel
* Added RandomState parameter to `from_samples` to account for randomness when building discrete models.
+ Misc
* Unneccessary calls to memset have been removed, courtesy of @alexhenrie
* Checking for missing values has been slightly refactored to be cleaner, courtesy of @mareksmid-lucid
* Include the LICENSE file in MANIFEST.in and simplify a bit, courtesy of @toddrme2178
* Added in a robust from_json method that can be used to deseralize a JSON for any pomegranate model.
+ docs
* Added io.rst to briefly describe data generators
* Added MarkovNetwork.rst to describe Markov networks
* Added links to tutorials that did not have tutorials linked to them.
+ Tutorials
* Added in a tutorial notebook for Markov networks
* Added in a tutorial notebook for data generators
* Added in a tutorial notebook for callbacks
+ CI
* Removed unit tests for Py2.7 from AppVeyor and Travis
* Added unit tests for Py3.8 to AppVeyor and Travis
- Dropped python2 support
OBS-URL: https://build.opensuse.org/request/show/761206
OBS-URL: https://build.opensuse.org/package/show/devel:languages:python:numeric/python-pomegranate?expand=0&rev=3
2020-01-06 15:59:56 +00:00
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Version: 0.12.0
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2019-12-03 15:54:07 +00:00
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Release: 0
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Summary: A graphical models library for Python
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License: MIT
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URL: https://github.com/jmschrei/pomegranate
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Source: https://github.com/jmschrei/pomegranate/archive/v%{version}.tar.gz#/pomegranate-%{version}.tar.gz
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BuildRequires: %{python_module Cython >= 0.22.1}
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BuildRequires: %{python_module devel}
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BuildRequires: %{python_module numpy >= 1.8.0}
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BuildRequires: %{python_module numpy-devel >= 1.8.0}
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BuildRequires: %{python_module scipy >= 0.17.0}
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BuildRequires: %{python_module setuptools}
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BuildRequires: fdupes
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BuildRequires: python-rpm-macros
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2021-02-12 14:56:14 +00:00
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Requires: python-PyYAML
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2019-12-03 15:54:07 +00:00
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Requires: python-joblib >= 0.9.0b4
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Requires: python-networkx >= 2.0
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Requires: python-numpy >= 1.8.0
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Requires: python-scipy >= 0.17.0
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# SECTION test requirements
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BuildRequires: %{python_module PyYAML}
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2019-12-03 15:54:07 +00:00
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BuildRequires: %{python_module joblib >= 0.9.0b4}
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BuildRequires: %{python_module networkx >= 2.0}
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BuildRequires: %{python_module numpy >= 1.8.0}
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BuildRequires: %{python_module scipy >= 0.17.0}
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# /SECTION
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%python_subpackages
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%description
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Pomegranate is a graphical models library for Python, implemented in Cython for speed.
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%package devel
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Summary: Development files for %{name}
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Requires: python-pomegranate = %{version}
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%description devel
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Pomegranate is a graphical models library for Python, implemented in Cython for speed.
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This package provides development files needed to run software that depends on
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Pomegranate.
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%prep
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%setup -q -n pomegranate-%{version}
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%build
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export CFLAGS="%{optflags}"
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%python_build
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%install
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%python_install
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%python_expand %fdupes %{buildroot}%{$python_sitearch}
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%files %{python_files}
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%doc README.md
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%license LICENSE
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%{python_sitearch}/pomegranate/
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%{python_sitearch}/pomegranate-%{version}-py*.egg-info
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%exclude %{python_sitearch}/pomegranate/*.c
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%exclude %{python_sitearch}/pomegranate/*/*.c
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%files %{python_files devel}
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%license LICENSE
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%{python_sitearch}/pomegranate/*.c
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%{python_sitearch}/pomegranate/*/*.c
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%changelog
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