Matej Cepl
7ec0f4a8b5
- Update to 4.14.0:
* enhancements:
- filtering and grouping area for binned (1D) spectral data has been improved
with changes to the default behavior and many bug fixes resulting in changes
to the statistics, degrees-of-freedom and energy flux in comparison to the
previous version for the same data with the same filter.
- updates to allow users to change the hard limits of XSPEC model parameters
- the sample_flux routine now returns correct information for the clip column
* documentation changes:
- improved PHA simulation documentation
- improved Filtering and grouping of PHA data documentation
- added sherpa.image module documentation
- added section on running tests to developer docs
* Infrastructure Changes:
- updates to support Apple ARM
- update to support Xspec version 12.12
- update fftw from version 3.3.8 to 3.3.9
- clean up of compiler and sphinx warnings
- changes to support gcc 9.3.0 in conda defaults
- updates to support python 3.9 including readline 8.1 upgrade, numpy minimum
1.19 (numpy 1.18 minimum for python 3.7/8)
- test infrastructure clean up and updates
* bug fixes:
- updates to fix several 'unable to parse region string: None' errors
- fix issue where save_all() of a loaded image with no region filter would fail
on reload
- fixed issue with plot_model() being called before notice or ignore could
lead to filters not getting applied
- fix to error out instead of crash when grouping data using an unsupported
method
OBS-URL: https://build.opensuse.org/request/show/935920
OBS-URL: https://build.opensuse.org/package/show/devel:languages:python:numeric/python-sherpa?expand=0&rev=20
116 lines
3.9 KiB
RPMSpec
116 lines
3.9 KiB
RPMSpec
#
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# spec file for package python-sherpa
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#
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# Copyright (c) 2021 SUSE LLC
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#
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# All modifications and additions to the file contributed by third parties
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# remain the property of their copyright owners, unless otherwise agreed
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# upon. The license for this file, and modifications and additions to the
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# file, is the same license as for the pristine package itself (unless the
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# license for the pristine package is not an Open Source License, in which
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# case the license is the MIT License). An "Open Source License" is a
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# license that conforms to the Open Source Definition (Version 1.9)
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# published by the Open Source Initiative.
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# Please submit bugfixes or comments via https://bugs.opensuse.org/
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#
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%{?!python_module:%define python_module() python-%{**} python3-%{**}}
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%define skip_python2 1
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%define skip_python36 1
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Name: python-sherpa
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Version: 4.14.0
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Release: 0
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Summary: Modeling and fitting package for scientific data analysis
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License: GPL-3.0-only
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URL: https://github.com/sherpa/sherpa/
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Source: https://github.com/sherpa/sherpa/archive/%{version}.tar.gz#/sherpa-%{version}.tar.gz
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Patch1: reproducible.patch
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BuildRequires: %{python_module devel}
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BuildRequires: %{python_module numpy-devel}
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BuildRequires: %{python_module setuptools}
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BuildRequires: bison
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BuildRequires: fdupes
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BuildRequires: fftw3-devel
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BuildRequires: flex
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BuildRequires: gcc-c++
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BuildRequires: gcc-fortran
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BuildRequires: python-rpm-macros
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# 4.14.0 requires numpy minimum 1.19 (numpy 1.18 minimum for python 3.7/8)
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Requires: python-numpy >= 1.18
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Requires(post): update-alternatives
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Requires(postun):update-alternatives
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ExcludeArch: %{ix86}
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# SECTION test requirements
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BuildRequires: %{python_module pytest >= 3.3}
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BuildRequires: %{python_module pytest-xvfb}
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# Highly recommended by upstream when building from source https://sherpa.readthedocs.io/en/latest/install.html#building-from-source
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BuildRequires: %{python_module astropy}
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BuildRequires: %{python_module matplotlib}
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# /SECTION
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%python_subpackages
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%description
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Sherpa is the CIAO modeling and fitting application. It enables the
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user to construct models from definitions and fit those models to
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data, using a variety of statistics and optimization methods.
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%prep
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%setup -q -n sherpa-%{version}
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%autopatch -p1
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sed -i "s|#fftw=local|fftw=local|" setup.cfg
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sed -i "s|#fftw-include[-_]dirs.*$|fftw-include-dirs=%{_includedir}|" setup.cfg
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sed -i "s|#fftw-lib-dirs.*$|fftw-lib-dirs=%{_libdir}|" setup.cfg
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sed -i "s|#fftw-libraries|fftw-libraries|" setup.cfg
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sed -i "s|/lib/|/%{_lib}/|" helpers/sherpa_config.py
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%build
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cp -r extern extern0
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%{python_expand %{$python_build}
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rm -r extern
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cp -r extern0 extern
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}
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%install
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%python_install
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%python_clone -a %{buildroot}%{_bindir}/sherpa_test
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%python_clone -a %{buildroot}%{_bindir}/sherpa_smoke
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%python_expand %fdupes %{buildroot}%{$python_sitearch}
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%{python_expand # REMOVE HASHBANGS FROM NON-EXEC FILES
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sed -i "1{/\\/usr\\/bin\\/env python/d}" %{buildroot}%{$python_sitearch}/sherpa/optmethods/ncoresde.py
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sed -i "1{/\\/usr\\/bin\\/env python/d}" %{buildroot}%{$python_sitearch}/sherpa/optmethods/ncoresnm.py
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sed -i "1{/\\/usr\\/bin\\/env python/d}" %{buildroot}%{$python_sitearch}/sherpa/optmethods/opt.py
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sed -i "1{/\\/usr\\/bin\\/env python/d}" %{buildroot}%{$python_sitearch}/sherpa/utils/akima.py
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}
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%check
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# avoid conftest import mismatch
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mv sherpa sherpa_temp
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# astropy 4.2 fits header warning
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donttest+="test_load_case_3"
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%pytest_arch --pyargs sherpa -k "not ($donttest)"
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%post
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%python_install_alternative sherpa_smoke
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%python_install_alternative sherpa_test
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%postun
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%python_uninstall_alternative sherpa_smoke
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%python_uninstall_alternative sherpa_test
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%files %{python_files}
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%doc README.md
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%license LICENSE
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%python_alternative %{_bindir}/sherpa_test
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%python_alternative %{_bindir}/sherpa_smoke
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%{python_sitearch}/sherpa
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%{python_sitearch}/sherpa-%{version}*-info
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%{python_sitearch}/stk.so
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%{python_sitearch}/group.so
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%changelog
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