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Accepting request 872458 from home:bnavigator:branches:devel:languages:python:numeric

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- Disable python36 build: python36-numpy is no longer in Tumbleweed
  xarray will follow to drop Python 3.6 support on next release.
  (NEP 29)
- Add xarray-pr4884-dask2021.patch gh#pydata/xarray#4884
- Enable parralel testing with pytest-xdist
- Recommend/Suggest the extras

OBS-URL: https://build.opensuse.org/request/show/872458
OBS-URL: https://build.opensuse.org/package/show/devel:languages:python:numeric/python-xarray?expand=0&rev=43
This commit is contained in:
Markéta Machová
2021-02-15 13:28:30 +00:00
committed by Git OBS Bridge
parent a0b409b2fd
commit 3e8fc3aad1
3 changed files with 167 additions and 10 deletions
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48
python-xarray.spec
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@@ -1,7 +1,7 @@
#
# spec file for package python-xarray
#
# Copyright (c) 2020 SUSE LLC
# Copyright (c) 2021 SUSE LLC
#
# All modifications and additions to the file contributed by third parties
# remain the property of their copyright owners, unless otherwise agreed
@@ -18,6 +18,8 @@
%{?!python_module:%define python_module() python-%{**} python3-%{**}}
%define skip_python2 1
# NEP 29: Numpy 1.20 dropped support for Python 3.6, python36-numpy is removed from Tumbleweed. xarray will follow on next release
%define skip_python36 1
Name: python-xarray
Version: 0.16.2
Release: 0
@@ -25,6 +27,8 @@ Summary: N-D labeled arrays and datasets in Python
License: Apache-2.0
URL: https://github.com/pydata/xarray
Source: https://files.pythonhosted.org/packages/source/x/xarray/xarray-%{version}.tar.gz
# PATCH-FIX-UPSTREAM xarray-pr4884-dask2021.patch gh#pydata/xarray#4884
Patch0: xarray-pr4884-dask2021.patch
BuildRequires: %{python_module numpy >= 1.15}
BuildRequires: %{python_module numpy-devel >= 1.14}
BuildRequires: %{python_module pandas >= 0.25}
@@ -34,15 +38,35 @@ BuildRequires: fdupes
BuildRequires: python-rpm-macros
Requires: python-numpy >= 1.15
Requires: python-pandas >= 0.25
Recommends: python-scipy >= 1.3
Suggests: python-dask >= 2.2
Provides: python-xray = %{version}
Obsoletes: python-xray < %{version}
BuildArch: noarch
Suggests: python-dask-all
# SECTION extras accel
Recommends: python-scipy >= 1.3
Recommends: python-bottleneck
Recommends: python-numbagg
# /SECTION
# SECTION extras viz
Suggests: python-matplotlib
Suggests: python-seaborn
Suggests: python-nc-time-axis
#/SECTION
# SECTION extras io
Suggests: python-netCDF4
Suggests: python-h5netcdf
Suggests: python-scipy
Suggests: python-pydap
Suggests: python-zarr
Suggests: python-fsspec
Suggests: python-cftime
Suggests: python-rasterio
Suggests: python-cfgrib
#/SECTION
# SECTION tests
# dask tests currently failing
# BuildRequires: %%{python_module dask-dataframe}
BuildRequires: %{python_module pytest >= 2.7.1}
BuildRequires: %{python_module dask-dataframe}
BuildRequires: %{python_module pytest-xdist}
BuildRequires: %{python_module pytest}
BuildRequires: %{python_module scipy}
# /SECTION
%python_subpackages
@@ -57,7 +81,7 @@ The Common Data Model for self-describing scientific data is used.
The dataset is an in-memory representation of a netCDF file.
%prep
%setup -q -n xarray-%{version}
%autosetup -p1 -n xarray-%{version}
chmod -x xarray/util/print_versions.py
%build
@@ -68,12 +92,16 @@ chmod -x xarray/util/print_versions.py
%python_expand %fdupes %{buildroot}%{$python_sitelib}
%check
# test_no_warning_from_dask_effective_get fails due to upstream scipy warning
%pytest -k "not test_download_from_github and not test_no_warning_from_dask_effective_get" xarray
if [ $(getconf LONG_BIT) -eq 32 ]; then
# precision errors on 32-bit
donttest="(test_interpolate_chunk_advanced and linear)"
fi
%pytest -n auto ${donttest:+ -k "not ($donttest)"} xarray
%files %{python_files}
%doc README.rst
%license LICENSE licenses/
%{python_sitelib}/xarray*
%{python_sitelib}/xarray
%{python_sitelib}/xarray-%{version}*-info
%changelog