- Update to 2025.12.0

* This release rolls back the default engine for HTTP urls, adds support for DataTree objects in combine_nested and contains numerous bug fixes. - Release 2025.11.0 * This release changes the default for keep_attrs such that attributes are preserved by default, adds support for DataTree in top-level functions, and contains several memory and performance improvements as well as a number of bug fixes. - Release 2025.10.0 and 2025.10.1 * These releases revert a breaking change to Xarray's preferred netCDF backend. - Release 2025.09.1 * This release contains improvements to netCDF IO and the DataTree.from_dict() constructor, as well as a variety of bug fixes. In particular, the default netCDF backend has switched from netCDF4 to h5netcdf, which is typically faster. - Release 2025.09.0 * This release brings a number of small improvements and fixes, especially related to writing DataTree objects and netCDF files to disk. ## New Features * Support rechunking by SeasonResampler for seasonal data analysis (GH10425, PR10519). By Dhruva Kumar Kaushal. * Add convenience methods to Coordinates (PR10318) By Justus Magin. * Added load_datatree() for loading DataTree objects into memory from disk. It has the same relationship to open_datatree(), as load_dataset() has to open_dataset(). By Stephan Hoyer. * compute=False is now supported by DataTree.to_netcdf() and OBS-URL: https://build.opensuse.org/package/show/devel:languages:python:numeric/python-xarray?expand=0&rev=114
2025-12-23 15:18:29 +00:00
commit ed0f425347
9 changed files with 4420 additions and 0 deletions
--- a/.gitattributes
+++ b/.gitattributes
@@ -0,0 +1,23 @@
+## Default LFS
+*.7z filter=lfs diff=lfs merge=lfs -text
+*.bsp filter=lfs diff=lfs merge=lfs -text
+*.bz2 filter=lfs diff=lfs merge=lfs -text
+*.gem filter=lfs diff=lfs merge=lfs -text
+*.gz filter=lfs diff=lfs merge=lfs -text
+*.jar filter=lfs diff=lfs merge=lfs -text
+*.lz filter=lfs diff=lfs merge=lfs -text
+*.lzma filter=lfs diff=lfs merge=lfs -text
+*.obscpio filter=lfs diff=lfs merge=lfs -text
+*.oxt filter=lfs diff=lfs merge=lfs -text
+*.pdf filter=lfs diff=lfs merge=lfs -text
+*.png filter=lfs diff=lfs merge=lfs -text
+*.rpm filter=lfs diff=lfs merge=lfs -text
+*.tbz filter=lfs diff=lfs merge=lfs -text
+*.tbz2 filter=lfs diff=lfs merge=lfs -text
+*.tgz filter=lfs diff=lfs merge=lfs -text
+*.ttf filter=lfs diff=lfs merge=lfs -text
+*.txz filter=lfs diff=lfs merge=lfs -text
+*.whl filter=lfs diff=lfs merge=lfs -text
+*.xz filter=lfs diff=lfs merge=lfs -text
+*.zip filter=lfs diff=lfs merge=lfs -text
+*.zst filter=lfs diff=lfs merge=lfs -text
--- a/.gitignore
+++ b/.gitignore
@@ -0,0 +1 @@
+.osc
--- a/3
+++ b/3
@@ -0,0 +1,3 @@
+<multibuild>
+  <package>test</package>
+</multibuild>
--- a/local_dataset.patch
+++ b/local_dataset.patch
@@ -0,0 +1,19 @@
+Index: xarray-2025.03.0/xarray/tutorial.py
+===================================================================
+--- xarray-2025.03.0.orig/xarray/tutorial.py
+++ xarray-2025.03.0/xarray/tutorial.py
+@@ -164,9 +164,11 @@ def open_dataset(
+     downloader = pooch.HTTPDownloader(headers=headers)
+ 
+     # retrieve the file
+-    filepath = pooch.retrieve(
+-        url=url, known_hash=None, path=cache_dir, downloader=downloader
+-    )
+    fname = pathlib.Path(cache_dir, path).expanduser()
+    if not fname.exists():
+        fname = None
+    filepath = pooch.retrieve(url=url, fname=fname, known_hash=None, path=cache_dir)
+
+     ds = _open_dataset(filepath, engine=engine, **kws)
+     if not cache:
+         ds = ds.load()
--- a/no-mypy-test-plugin.patch
+++ b/no-mypy-test-plugin.patch
@@ -0,0 +1,13 @@
+Index: xarray-2025.03.0/pyproject.toml
+===================================================================
+--- xarray-2025.03.0.orig/pyproject.toml
+++ xarray-2025.03.0/pyproject.toml
+@@ -296,8 +296,6 @@ ban-relative-imports = "all"
+ addopts = [
+   "--strict-config",
+   "--strict-markers",
+-  "--mypy-only-local-stub",
+-  "--mypy-pyproject-toml-file=pyproject.toml",
+ ]
+ 
+ # We want to forbid warnings from within xarray in our tests — instead we should
--- a/python-xarray.changes
+++ b/python-xarray.changes
--- a/python-xarray.spec
+++ b/python-xarray.spec
@@ -0,0 +1,206 @@
+#
+# spec file for package python-xarray
+#
+# Copyright (c) 2025 SUSE LLC and contributors
+#
+# All modifications and additions to the file contributed by third parties
+# remain the property of their copyright owners, unless otherwise agreed
+# upon. The license for this file, and modifications and additions to the
+# file, is the same license as for the pristine package itself (unless the
+# license for the pristine package is not an Open Source License, in which
+# case the license is the MIT License). An "Open Source License" is a
+# license that conforms to the Open Source Definition (Version 1.9)
+# published by the Open Source Initiative.
+
+# Please submit bugfixes or comments via https://bugs.opensuse.org/
+#
+
+
+%global flavor @BUILD_FLAVOR@%{nil}
+%if "%{flavor}" == "test"
+%bcond_without test
+%define psuffix -test
+%else
+%bcond_with test
+%define psuffix %{nil}
+%endif
+
+%{?sle15_python_module_pythons}
+Name:           python-xarray%{psuffix}
+Version:        2025.12.0
+Release:        0
+Summary:        N-D labeled arrays and datasets in Python
+License:        Apache-2.0
+URL:            https://github.com/pydata/xarray
+Source:         https://github.com/pydata/xarray/archive/refs/tags/v%{version}.tar.gz#/xarray-%{version}-gh.tar.gz
+# PATCH-FEATURE-UPSTREAM local_dataset.patch gh#pydata/xarray#5377 mcepl@suse.com
+# fix xr.tutorial.open_dataset to work with the preloaded cache.
+Patch0:         local_dataset.patch
+# PATCH-FIX-OPENSUSE: skip dependency on pytest-mypy
+Patch1:         no-mypy-test-plugin.patch
+BuildRequires:  %{python_module base >= 3.11}
+BuildRequires:  %{python_module pip}
+BuildRequires:  %{python_module setuptools_scm}
+BuildRequires:  %{python_module setuptools}
+BuildRequires:  %{python_module wheel}
+BuildRequires:  fdupes
+BuildRequires:  python-rpm-macros
+Requires:       python-numpy >= 1.26
+Requires:       python-packaging >= 24.1
+Requires:       python-pandas >= 2.2
+Obsoletes:      python-xray <= 0.7
+BuildArch:      noarch
+%if %{with test}
+BuildRequires:  %{python_module hypothesis}
+BuildRequires:  %{python_module pytest-asyncio}
+BuildRequires:  %{python_module pytest-env}
+BuildRequires:  %{python_module pytest-timeout}
+BuildRequires:  %{python_module pytest-xdist}
+BuildRequires:  %{python_module pytest}
+BuildRequires:  %{python_module ruff >= 0.8.0}
+BuildRequires:  %{python_module xarray-complete = %{version}}
+%endif
+# /SECTION
+%python_subpackages
+
+%description
+xarray (formerly xray) is a python-pandas-like and pandas-compatible
+toolkit for analytics on multi-dimensional arrays. It provides
+N-dimensional variants of the python-pandas labeled data structures,
+rather than the tabular data that pandas uses.
+
+The Common Data Model for self-describing scientific data is used.
+The dataset is an in-memory representation of a netCDF file.
+
+%package accel
+Summary:        The python xarray[accel] extra
+Requires:       python-Bottleneck
+Requires:       python-numba >= 0.62
+Requires:       python-opt-einsum
+Requires:       python-scipy >= 1.13
+Requires:       python-xarray = %{version}
+# not available yet
+Recommends:     python-flox
+Recommends:     python-numbagg >= 0.8
+
+%description accel
+The [accel] extra for xarray, N-D labeled arrays and datasets in Python
+Except flox and numbagg, because they are not packaged yet.
+Use `pip --user install flox numbagg` to install from PyPI, if needed.
+
+%package complete
+Summary:        The python xarray[complete] extra
+Requires:       python-xarray = %{version}
+Requires:       python-xarray-accel = %{version}
+Requires:       python-xarray-io = %{version}
+Requires:       python-xarray-parallel = %{version}
+Requires:       python-xarray-viz = %{version}
+
+%description complete
+The [complete] extra for xarray, N-D labeled arrays and datasets in Python
+
+%package io
+Summary:        The python xarray[io] extra
+Requires:       python-cftime
+Requires:       python-fsspec
+Requires:       python-h5netcdf
+Requires:       python-netCDF4 >= 1.6
+Requires:       python-pooch
+Requires:       python-scipy >= 1.13
+Requires:       python-xarray = %{version}
+Requires:       python-zarr >= 2.18
+# Not available yet
+Recommends:     python-pydap
+
+%description io
+The [io] extra for xarray, N-D labeled arrays and datasets in Python
+
+%package parallel
+Summary:        The python xarray[parallel] extra
+Requires:       python-dask-complete
+Requires:       python-xarray = %{version}
+
+%description parallel
+The [parallel] extra for xarray, N-D labeled arrays and datasets in Python
+
+%package viz
+Summary:        The python xarray[viz] extra
+Requires:       python-matplotlib >= 3.8
+Requires:       python-seaborn
+Requires:       python-xarray = %{version}
+# Not available yet
+Recommends:     python-cartopy >= 0.23
+Recommends:     python-nc-time-axis
+
+%description viz
+The [viz] extra for xarray, N-D labeled arrays and datasets in Python
+
+Except nc-time-axis and cartopy, because they're not packaged yet.
+Use `pip --user install nc-time-axis cartopy` to install from PyPI, if needed.
+
+%prep
+%autosetup -p1 -n xarray-%{version}
+chmod -x xarray/util/print_versions.py
+
+%build
+%if !%{with test}
+%pyproject_wheel
+%endif
+
+%install
+%if !%{with test}
+%pyproject_install
+%python_expand %fdupes %{buildroot}%{$python_sitelib}
+%endif
+
+%if %{with test}
+%check
+# obs file open race conditions?
+donttest="(test_open_mfdataset_manyfiles and (h5netcdf or netCDF4))"
+if [ $(getconf LONG_BIT) -eq 32 ]; then
+  # https://github.com/pydata/xarray/issues/5341
+  # https://github.com/pydata/xarray/issues/5375
+  # still precision problems in 2022.11.0
+  donttest="$donttest or (test_interpolate_chunk_advanced and linear)"
+  # tests for 64bit types
+  donttest="$donttest or TestZarrDictStore or TestZarrDirectoryStore or TestZarrWriteEmpty"
+  donttest="$donttest or test_repr_multiindex or test_array_repr_dtypes_unix or test_asi8"
+  donttest="$donttest or (test_datatree and TestRepr and test_doc_example)"
+fi
+# h5py was built without ROS3 support, can't use ros3 driver
+donttest="$donttest or TestH5NetCDFDataRos3Driver"
+# NetCDF4 fails with these unsupported drivers
+donttest="$donttest or (TestNetCDF4 and test_compression_encoding and (szip or zstd or blosc_lz or blosc_zlib))"
+
+%pytest -n auto -rsEf -k "not ($donttest)" xarray
+%endif
+
+%if !%{with test}
+%files %{python_files}
+%doc README.md
+%license LICENSE licenses/
+%{python_sitelib}/xarray
+%{python_sitelib}/xarray-*.dist-info
+
+%files %{python_files accel}
+%doc README.md
+%license LICENSE
+
+%files %{python_files complete}
+%doc README.md
+%license LICENSE
+
+%files %{python_files io}
+%doc README.md
+%license LICENSE
+
+%files %{python_files parallel}
+%doc README.md
+%license LICENSE
+
+%files %{python_files viz}
+%doc README.md
+%license LICENSE
+%endif
+
+%changelog
--- a/xarray-2025.03.0-gh.tar.gz
+++ b/xarray-2025.03.0-gh.tar.gz
@@ -0,0 +1,3 @@
+version https://git-lfs.github.com/spec/v1
+oid sha256:d5e3bb7e087feaa86f98f0a6bccb40e29205f2f9d6a8329741c2c843ab0f624c
+size 3281586
--- a/xarray-2025.12.0-gh.tar.gz
+++ b/xarray-2025.12.0-gh.tar.gz
@@ -0,0 +1,3 @@
+version https://git-lfs.github.com/spec/v1
+oid sha256:17aa3879c0d7c6c57f2f4a85b9c9684a5872bb591d9478405312d83a57d56ecd
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