Dirk Mueller
63abaa0ce5
* This release adds some new methods and operators, updates our
deprecation policy for python versions, fixes some bugs with
groupby, and introduces experimental support for alternative
chunked parallel array computation backends via a new plugin
system!
* Docstrings examples for string methods
* Fix groupby_bins when labels are specified
* Fix binning by unsorted array
* This release includes support for pandas v2, allows
refreshing of backend engines in a session, and removes
deprecated backends for ``rasterio`` and ``cfgrib``.
OBS-URL: https://build.opensuse.org/package/show/devel:languages:python:numeric/python-xarray?expand=0&rev=80
127 lines
4.2 KiB
RPMSpec
127 lines
4.2 KiB
RPMSpec
#
|
|
# spec file for package python-xarray
|
|
#
|
|
# Copyright (c) 2023 SUSE LLC
|
|
#
|
|
# All modifications and additions to the file contributed by third parties
|
|
# remain the property of their copyright owners, unless otherwise agreed
|
|
# upon. The license for this file, and modifications and additions to the
|
|
# file, is the same license as for the pristine package itself (unless the
|
|
# license for the pristine package is not an Open Source License, in which
|
|
# case the license is the MIT License). An "Open Source License" is a
|
|
# license that conforms to the Open Source Definition (Version 1.9)
|
|
# published by the Open Source Initiative.
|
|
|
|
# Please submit bugfixes or comments via https://bugs.opensuse.org/
|
|
#
|
|
|
|
|
|
%{?sle15_python_module_pythons}
|
|
Name: python-xarray
|
|
Version: 2023.5.0
|
|
Release: 0
|
|
Summary: N-D labeled arrays and datasets in Python
|
|
License: Apache-2.0
|
|
URL: https://github.com/pydata/xarray
|
|
Source: https://files.pythonhosted.org/packages/source/x/xarray/xarray-%{version}.tar.gz
|
|
# PATCH-FEATURE-UPSTREAM local_dataset.patch gh#pydata/xarray#5377 mcepl@suse.com
|
|
# fix xr.tutorial.open_dataset to work with the preloaded cache.
|
|
Patch0: local_dataset.patch
|
|
BuildRequires: %{python_module base >= 3.9}
|
|
BuildRequires: %{python_module numpy-devel >= 1.20}
|
|
BuildRequires: %{python_module packaging >= 21.3}
|
|
BuildRequires: %{python_module pandas >= 1.3}
|
|
BuildRequires: %{python_module setuptools_scm}
|
|
BuildRequires: %{python_module setuptools}
|
|
BuildRequires: fdupes
|
|
BuildRequires: python-rpm-macros
|
|
Requires: python-numpy >= 1.21
|
|
Requires: python-packaging >= 21.3
|
|
Requires: python-pandas >= 1.4
|
|
Provides: python-xray = %{version}
|
|
Obsoletes: python-xray < %{version}
|
|
BuildArch: noarch
|
|
# SECTION extras accel
|
|
Recommends: python-scipy
|
|
Recommends: python-bottleneck
|
|
Recommends: python-flox
|
|
Recommends: python-numbagg
|
|
# /SECTION
|
|
# SECTION extras parallalel
|
|
Suggests: python-dask-complete
|
|
# /SECTION
|
|
# SECTION extras viz
|
|
Suggests: python-matplotlib
|
|
Suggests: python-seaborn
|
|
Suggests: python-nc-time-axis
|
|
#/SECTION
|
|
# SECTION extras io
|
|
Suggests: python-netCDF4
|
|
Suggests: python-h5netcdf
|
|
Suggests: (python-pydap if python-base < 3.10)
|
|
Suggests: python-zarr
|
|
Suggests: python-fsspec
|
|
Suggests: python-cftime
|
|
Suggests: python-rasterio
|
|
Suggests: python-cfgrib
|
|
Suggests: python-pooch
|
|
#/SECTION
|
|
# SECTION tests
|
|
BuildRequires: %{python_module Bottleneck}
|
|
# not available on python 3.11
|
|
#BuildRequires: %%{python_module dask-dataframe}
|
|
#BuildRequires: %%{python_module dask-diagnostics}
|
|
BuildRequires: %{python_module h5netcdf}
|
|
BuildRequires: %{python_module matplotlib}
|
|
BuildRequires: %{python_module netCDF4}
|
|
BuildRequires: %{python_module pooch}
|
|
BuildRequires: %{python_module pytest-xdist}
|
|
BuildRequires: %{python_module pytest}
|
|
BuildRequires: %{python_module scipy}
|
|
BuildRequires: %{python_module zarr}
|
|
# /SECTION
|
|
%python_subpackages
|
|
|
|
%description
|
|
xarray (formerly xray) is a python-pandas-like and pandas-compatible
|
|
toolkit for analytics on multi-dimensional arrays. It provides
|
|
N-dimensional variants of the python-pandas labeled data structures,
|
|
rather than the tabular data that pandas uses.
|
|
|
|
The Common Data Model for self-describing scientific data is used.
|
|
The dataset is an in-memory representation of a netCDF file.
|
|
|
|
%prep
|
|
%autosetup -p1 -n xarray-%{version}
|
|
|
|
chmod -x xarray/util/print_versions.py
|
|
|
|
%build
|
|
%python_build
|
|
|
|
%install
|
|
%python_install
|
|
%python_expand %fdupes %{buildroot}%{$python_sitelib}
|
|
|
|
%check
|
|
# OOM crashes the whole vm or even the local host running osc: https://github.com/pydata/xarray/issues/6854
|
|
donttest="nczarr"
|
|
if [ $(getconf LONG_BIT) -eq 32 ]; then
|
|
# https://github.com/pydata/xarray/issues/5341
|
|
# https://github.com/pydata/xarray/issues/5375
|
|
# still precision problems in 2022.11.0
|
|
donttest="$donttest or (test_interpolate_chunk_advanced and linear)"
|
|
# tests for 64bit types
|
|
donttest="$donttest or TestZarrDictStore or TestZarrDirectoryStore"
|
|
fi
|
|
%pytest -n auto -rsEf -k "not ($donttest)" xarray
|
|
|
|
%files %{python_files}
|
|
%doc README.md
|
|
%license LICENSE licenses/
|
|
%{python_sitelib}/xarray
|
|
%exclude %{python_sitelib}/xarray/tests
|
|
%{python_sitelib}/xarray-%{version}*-info
|
|
|
|
%changelog
|