Accepting request 879451 from home:mslacken:sp

- update to version 0.16.1
  * intel-oneapi support through new packages 
  * HIP/ROCm support (#19715, #20095)
  * concretization enhancements
  * environment install reporting fix (#20004)
  * avoid import in ABI compatibility info (#20236)
  * restore ability of dev-build to skip patches (#20351)
  * spack find -d spec grouping (#20028)
  * spack smoke test support (#19987, #20298)
  * abstract spec comparisons (#20341)
  * performance improvements for binary relocation (#19690, #20768)
  * additional sanity checks for variants in builtin packages (#20373)
  * do not pollute auto-generated configuration files with empty lists or
    dicts
- added file: basic-exclude-pattern-for-external-find.patch 
  * adds the functionality to exclude binaries for external search 
    so that the call 'installdbgsymbols' can be prohibited as this
    leads to an endless loop when drkonqui is installed

OBS-URL: https://build.opensuse.org/request/show/879451
OBS-URL: https://build.opensuse.org/package/show/network:cluster/spack?expand=0&rev=11

basic-exclude-pattern-for-external-find.patch

@@ -0,0 +1,65 @@
+From 03bf4e89802b626278a4b14b4349ee94aa722965 Mon Sep 17 00:00:00 2001
+From: Christian Goll <cgoll@suse.de>
+Date: Fri, 26 Feb 2021 14:21:04 +0100
+Subject: [PATCH] basic exclude pattern for external find
+
+---
+ lib/spack/spack/cmd/external.py | 18 +++++++++++++-----
+ 1 file changed, 13 insertions(+), 5 deletions(-)
+
+diff --git a/lib/spack/spack/cmd/external.py b/lib/spack/spack/cmd/external.py
+index 52af72ed8f..ff583d9e87 100644
+--- a/lib/spack/spack/cmd/external.py
++++ b/lib/spack/spack/cmd/external.py
+@@ -42,6 +42,9 @@ def setup_parser(subparser):
+         '--scope', choices=scopes, metavar=scopes_metavar,
+         default=spack.config.default_modify_scope('packages'),
+         help="configuration scope to modify")
++    find_parser.add_argument(
++        '--exclude',
++        help="do not call binaries with this regular pattern for the search")
+     find_parser.add_argument('packages', nargs=argparse.REMAINDER)
+ 
+     sp.add_parser(
+@@ -153,7 +156,7 @@ def external_find(args):
+     else:
+         packages_to_check = spack.repo.path.all_packages()
+ 
+-    pkg_to_entries = _get_external_packages(packages_to_check)
++    pkg_to_entries = _get_external_packages(packages_to_check,args.exclude)
+     new_entries = _update_pkg_config(
+         args.scope, pkg_to_entries, args.not_buildable
+     )
+@@ -236,7 +239,7 @@ def _update_pkg_config(scope, pkg_to_entries, not_buildable):
+     return all_new_specs
+ 
+ 
+-def _get_external_packages(packages_to_check, system_path_to_exe=None):
++def _get_external_packages(packages_to_check,exclude_binaries=None, system_path_to_exe=None):
+     if not system_path_to_exe:
+         system_path_to_exe = _get_system_executables()
+ 
+@@ -247,12 +250,17 @@ def _get_external_packages(packages_to_check, system_path_to_exe=None):
+                 exe_pattern_to_pkgs[exe].append(pkg)
+ 
+     pkg_to_found_exes = defaultdict(set)
++    if exclude_binaries:
++        compiled_exclude = re.compile(exclude_binaries)
++    else:
++        compiled_exclude = None
+     for exe_pattern, pkgs in exe_pattern_to_pkgs.items():
+         compiled_re = re.compile(exe_pattern)
+         for path, exe in system_path_to_exe.items():
+-            if compiled_re.search(exe):
+-                for pkg in pkgs:
+-                    pkg_to_found_exes[pkg].add(path)
++            if not compiled_exclude or not compiled_exclude.search(exe):
++                if compiled_re.search(exe):
++                    for pkg in pkgs:
++                        pkg_to_found_exes[pkg].add(path)
+ 
+     pkg_to_entries = defaultdict(list)
+     resolved_specs = {}  # spec -> exe found for the spec
+-- 
+2.26.2
+

spack-0.16.0.tar.gz

@@ -1,3 +0,0 @@
-version https://git-lfs.github.com/spec/v1
-oid sha256:064b2532c70916c7684d4c7c973416ac32dd2ea15f5c392654c75258bfc8c6c2
-size 5512800

spack-0.16.1.tar.gz

@@ -0,0 +1,3 @@
+version https://git-lfs.github.com/spec/v1
+oid sha256:8d893036b24d9ee0feee41ac33dd66e4fc68d392918f346f8a7a36a69c567567
+size 5528986

spack.changes

@@ -4,6 +4,28 @@ Fri Feb 26 22:06:36 UTC 2021 - Egbert Eich <eich@suse.com>
 - Remove BuildRequires for patterns-base-basesystem and
   distribution-release.
 
+-------------------------------------------------------------------
+Fri Feb 26 10:40:00 UTC 2021 - Christian Goll <cgoll@suse.com>
+
+- update to version 0.16.1
+  * intel-oneapi support through new packages 
+  * HIP/ROCm support (#19715, #20095)
+  * concretization enhancements
+  * environment install reporting fix (#20004)
+  * avoid import in ABI compatibility info (#20236)
+  * restore ability of dev-build to skip patches (#20351)
+  * spack find -d spec grouping (#20028)
+  * spack smoke test support (#19987, #20298)
+  * abstract spec comparisons (#20341)
+  * performance improvements for binary relocation (#19690, #20768)
+  * additional sanity checks for variants in builtin packages (#20373)
+  * do not pollute auto-generated configuration files with empty lists or
+    dicts
+- added file: basic-exclude-pattern-for-external-find.patch 
+  * adds the functionality to exclude binaries for external search 
+    so that the call 'installdbgsymbols' can be prohibited as this
+    leads to an endless loop when drkonqui is installed
+  
 -------------------------------------------------------------------
 Thu Feb  4 06:54:13 UTC 2021 - Egbert Eich <eich@suse.com>
 

spack.spec

@@ -28,15 +28,15 @@ ExclusiveArch:  do_not_build
 %define spack_dir  %_prefix/lib/spack/
 %define spack_group spack
 # These packages are found and can be used by spack, /etc/spack/packages-yaml
-# needs to be updated when one of these packages is updated or uninstalled. 
+# needs to be updated when one of these packages is updated or uninstalled.
-# Distinguish between packages we recommend and packages which 
+# Distinguish between packages we recommend and packages which
 %define spack_trigger_recommended autoconf bash bison bzip2 cmake-full ccache cpio diffutils findutils flex gcc gcc-fortran git-lfs make m4 ncurses-devel libtool openssl perl-base pkgconf pkgconf-pkg-config python3-basetar info xz
 # packages recognized by spack, but not recommended
 %define spack_trigger_packages ghostscript go fish fzf hugo java-11-openjdk-devel java-14-openjdk-devel java-15-openjdk-devel java-16-openjdk-devel java-1_8_0-openjdk-devel ruby
-# non oss packages 
+# non oss packages
 %define spack_trigger_external cuda-nvcc
 Name:           spack
-Version:        0.16.0
+Version:        0.16.1
 Release:        0
 Summary:        Package manager for HPC systems
 License:        Apache-2.0 AND MIT AND Python-2.0 AND BSD-3-Clause
@@ -51,6 +51,7 @@ Patch3:         added-dockerfile-for-opensuse-leap-15.patch
 Patch4:         added-target-and-os-calls-to-output-of-spack-spec-co.patch
 Patch5:         Fix-documentation-so-that-parser-doesn-t-stumble.patch
 Patch6:         Fix-error-during-documentation-build-due-to-recursive-module-inclusion.patch
+Patch7:         basic-exclude-pattern-for-external-find.patch
 # upstream patch removes also problemtatic binaries
 #Patch4:         spack-test-15702.patch
 %if %{without doc}
@@ -68,8 +69,8 @@ Requires:       lua-lmod
 Requires:       polkit
 Requires:       spack-recipes
 Requires:       xz
-Recommends:     spack-recipes = %version
 Recommends:     %spack_trigger_recommended
+Recommends:     spack-recipes = %version
 %else
 BuildRequires:  %{python_module Sphinx >= 1.8}
 BuildRequires:  %{python_module sphinxcontrib-programoutput}
@@ -100,7 +101,6 @@ using different compilers, options, and MPI implementations.
 
 This package provides a module file that must be loaded to use spack.
 
-
 %package recipes
 Summary:        Spack built-in package recipes
 Requires:       %{name} >= %version
@@ -114,7 +114,7 @@ runs correctly regardless of environment, and file management
 is streamlined. Spack can install many variants of the same build
 using different compilers, options, and MPI implementations.
 
-This package contains the built-in package recipes. 
+This package contains the built-in package recipes.
 
 %package man
 Summary:        Man Page for Spack - Package manager for HPC systems
@@ -146,7 +146,6 @@ using different compilers, options, and MPI implementations.
 
 This package contains the info page.
 
-
 %prep
 %setup -q
 %autopatch -p1
@@ -166,9 +165,9 @@ cd lib/spack/docs
 grep -rl ":target:" | xargs sed  -i -e "/:target:/s/^/#/" -e "/figure::/s/^/#/"
 # Fix path to var - we install this to the 'real' /var
 grep -rl "\$SPACK_ROOT/var" | xargs sed -i -e "s@\(.*\)\$SPACK_ROOT/var\(/spack.*\)@\1/var/lib\2@g"
-# spack cannot run without knowing at least the compiler, so we inject 
+# spack cannot run without knowing at least the compiler, so we inject
 # a dummy one
-mkdir -p ${HOME}/.spack/linux/ 
+mkdir -p ${HOME}/.spack/linux/
 cat >  ${HOME}/.spack/linux/compilers.yaml <<EOF
 compilers:
 - compiler:
@@ -214,8 +213,8 @@ rm -f share/spack/setup-tutorial-env.sh
 # Fix rpmlint warnings
 ## No need for the standalone scripts
 rm -f lib/spack/external/macholib/macho_*.py
-## Fix shebangs  
+## Fix shebangs
-sed -i 's@#!/bin/env sh@#!/bin/bash@' var/spack/repos/builtin/packages/beast-tracer/tracer 
+sed -i 's@#!/bin/env sh@#!/bin/bash@' var/spack/repos/builtin/packages/beast-tracer/tracer
 sed -i 's@#! /usr/bin/env bash@ #!/bin/bash@' share/spack/docker/entrypoint.bash
 sed -i 's@#!/usr/bin/env bash@#!/bin/bash@' share/spack/docker/package-index/split.sh
 
@@ -284,7 +283,7 @@ EOF
 mkdir -p %{buildroot}/%{_sysconfdir}/profile.d
 cat > %{buildroot}/%{_sysconfdir}/profile.d/spack.sh <<EOF
 source /etc/os-release
-if [ "\${ID}" == "opensuse-tumbleweed" ] ; then 
+if [ "\${ID}" == "opensuse-tumbleweed" ] ; then
   SPACK_NAME="\${ID/-/}"
 else
   SPACK_NAME="\${ID/-/_}\${VERSION_ID/.*/}"
@@ -310,9 +309,9 @@ eval \`awk '/^VERSION_ID=/ {sub("\\\\.[0-9]",""); printf("set %%s",\$0);}' /etc/
 if ( \$ID == "opensuse_tumbleweed" ) then
   eval \`awk '/^ID=/ {sub("-",""); printf("set %%s",\$0);}' /etc/os-release\`
   set SPACK_NAME=\$ID
-else  
+else
   set SPACK_NAME="\${ID}\${VERSION_ID}"
-endif 
+endif
 set SPACK_ROOT="%{spack_dir}"
 set MODULEPATH="~/spack/lmod/linux-\${SPACK_NAME}-\${CPU}:%{_prefix}/share/spack/lmod/linux-\${SPACK_NAME}-\${CPU}:\${MODULEPATH}"
 if ( ! -e ~/.spack/config.yaml )  then
@@ -371,7 +370,7 @@ sed -i "s@GCC_FULL_VERSION@$GCC_FULL_VERSION@" %{spack_dir}/etc/spack/modules.ya
 sed -i "s@GCC_VERSION@$GCC_VERSION@" %{spack_dir}/etc/spack/compilers.yaml
 if [ -e /etc/os-release ] ;  then
   source /etc/os-release
-  if [ "${ID}" == "opensuse-tumbleweed" ] ; then 
+  if [ "${ID}" == "opensuse-tumbleweed" ] ; then
     export SPACK_NAME="${ID/-/}"
   else
     export SPACK_NAME="${ID/-/_}${VERSION_ID/.*/}"
@@ -381,15 +380,15 @@ if [ -e /etc/os-release ] ;  then
 fi
 sed -i "s@HOSTTYPE@$HOSTTYPE@" %{spack_dir}/etc/spack/compilers.yaml
 # find installed programms
-test -e %{_sysconfdir}/spack/no_rpm_trigger || spack external find --scope system
+test -e %{_sysconfdir}/spack/no_rpm_trigger || spack external find --scope system --exclude 'installdbgsymbols'
 
 %triggerin -- %{?spack_trigger_recommended} %{?spack_trigger_packages} %{?spack_trigger_external}
-test -e %{_sysconfdir}/spack/no_rpm_trigger || spack external find --scope system
+test -e %{_sysconfdir}/spack/no_rpm_trigger || spack external find --scope system --exclude 'installdbgsymbols'
 test -e %{_sysconfdir}/spack/no_rpm_trigger || echo "Create %{_sysconfdir}/spack/no_rpm_trigger to stop spack to search for new packages after a rpm install"
 
 %triggerpostun -- %{?spack_trigger_recommended} %{?spack_trigger_packages} %{?spack_trigger_external}
 test -e %{_sysconfdir}/spack/no_rpm_trigger || rm /etc/spack/packages.yaml
-test -e %{_sysconfdir}/spack/no_rpm_trigger || spack external find --scope system
+test -e %{_sysconfdir}/spack/no_rpm_trigger || spack external find --scope system --exclude 'installdbgsymbols'
 test -e %{_sysconfdir}/spack/no_rpm_trigger || echo "Create %{_sysconfdir}/spack/no_rpm_trigger to stop spack to search for new packages after a rpm install"
 
 %if %{without doc}