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Accepting request 854051 from network:cluster:staging

Browse Source 
- added test for /etc/spack/no_rpm_trigger 

- added %triggerin and %triggerpostun for the packages which 
  can be detected by spack

- updated to 0.16.0
- added find for external packages
- added dockerfile for leap
  * added patchfile added-dockerfile-for-opensuse-leap-15.patch

- Add documentation (man and info pages, pdf doesn't build
  currently).
  * Do not ship documentation sources.
- Do not distribute Dockerfiles and other container related
  material, yet. This needs to be fixed so that the samples
  work with SUSE.
- Fully integrate spack into SUSE directory structure, fix
  paths where required.
  * Fix setup scripts to work correctly in above environment.

OBS-URL: https://build.opensuse.org/request/show/854051
OBS-URL: https://build.opensuse.org/package/show/network:cluster/spack?expand=0&rev=3
This commit is contained in:
Christian Goll 2020-12-08 15:10:47 +00:00 committed by Git OBS Bridge
parent 21936ccf0b
commit a641c6661c
10 changed files with 444 additions and 45 deletions
Show Stats Download Patch File Download Diff File Expand all files Collapse all files

143
Adapt-shell-scripts-that-set-up-the-environment-for-different-shells.patch Normal file
View File

@ -0,0 +1,143 @@
From fbbddf93f0715830a6ae9842c91f89ae40973619 Mon Sep 17 00:00:00 2001
From: Egbert Eich <eich@suse.com>
Date: Sat, 21 Nov 2020 21:46:02 +0100
Subject: [PATCH 4/4] Adapt shell scripts that set up the environment for
different shells
Signed-off-by: Egbert Eich <eich@suse.com>
---
share/spack/setup-env.csh | 5 +++-
share/spack/setup-env.fish | 15 +---------
share/spack/setup-env.sh | 57 +++-----------------------------------
3 files changed, 9 insertions(+), 68 deletions(-)
diff --git a/share/spack/setup-env.csh b/share/spack/setup-env.csh
index b70036456..ab3d941ef 100755
--- a/share/spack/setup-env.csh
+++ b/share/spack/setup-env.csh
@@ -12,6 +12,10 @@
#
# prevent infinite recursion when spack shells out (e.g., on cray for modules)
+if ($?SPACK_ROOT == 0) then
+ setenv SPACK_ROOT = @@_prefix@@
+endif
+
if ($?_sp_initializing) then
exit 0
endif
@@ -59,7 +63,6 @@ alias spacktivate 'spack env activate'
alias _spack_pathadd 'set _pa_args = (\!*) && source $_spack_share_dir/csh/pathadd.csh'
# Set variables needed by this script
-_spack_pathadd PATH "$SPACK_ROOT/bin"
eval `spack --print-shell-vars csh`
# Set up module search paths in the user environment
diff --git a/share/spack/setup-env.fish b/share/spack/setup-env.fish
index b74eae34d..decb718e1 100755
--- a/share/spack/setup-env.fish
+++ b/share/spack/setup-env.fish
@@ -660,20 +660,7 @@ end
-#
-# Figure out where this file is. Below code only needs to work in fish
-#
-set -l sp_source_file (status -f) # name of current file
-
-
-
-#
-# Find root directory and add bin to path.
-#
-set -l sp_share_dir (realpath (dirname $sp_source_file))
-set -l sp_prefix (realpath (dirname (dirname $sp_share_dir)))
-spack_pathadd PATH "$sp_prefix/bin"
-set -xg SPACK_ROOT $sp_prefix
+set -xg SPACK_ROOT @@_prefix@@
diff --git a/share/spack/setup-env.sh b/share/spack/setup-env.sh
index 5761d1636..768866abe 100755
--- a/share/spack/setup-env.sh
+++ b/share/spack/setup-env.sh
@@ -246,58 +246,6 @@ _sp_shell=$(_spack_determine_shell)
alias spacktivate="spack env activate"
-#
-# Figure out where this file is.
-#
-if [ "$_sp_shell" = bash ]; then
- _sp_source_file="${BASH_SOURCE[0]:-}"
-elif [ "$_sp_shell" = zsh ]; then
- _sp_source_file="${(%):-%N}"
-else
- # Try to read the /proc filesystem (works on linux without lsof)
- # In dash, the sourced file is the last one opened (and it's kept open)
- _sp_source_file_fd="$(\ls /proc/$$/fd 2>/dev/null | sort -n | tail -1)"
- if ! _sp_source_file="$(readlink /proc/$$/fd/$_sp_source_file_fd)"; then
- # Last resort: try lsof. This works in dash on macos -- same reason.
- # macos has lsof installed by default; some linux containers don't.
- _sp_lsof_output="$(lsof -p $$ -Fn0 | tail -1)"
- _sp_source_file="${_sp_lsof_output#*n}"
- fi
-
- # If we can't find this script's path after all that, bail out with
- # plain old $0, which WILL NOT work if this is sourced indirectly.
- if [ ! -f "$_sp_source_file" ]; then
- _sp_source_file="$0"
- fi
-fi
-
-#
-# Find root directory and add bin to path.
-#
-# We send cd output to /dev/null to avoid because a lot of users set up
-# their shell so that cd prints things out to the tty.
-_sp_share_dir="$(cd "$(dirname $_sp_source_file)" > /dev/null && pwd)"
-_sp_prefix="$(cd "$(dirname $(dirname $_sp_share_dir))" > /dev/null && pwd)"
-if [ -x "$_sp_prefix/bin/spack" ]; then
- export SPACK_ROOT="${_sp_prefix}"
-else
- # If the shell couldn't find the sourced script, fall back to
- # whatever the user set SPACK_ROOT to.
- if [ -n "$SPACK_ROOT" ]; then
- _sp_prefix="$SPACK_ROOT"
- _sp_share_dir="$_sp_prefix/share/spack"
- fi
-
- # If SPACK_ROOT didn't work, fail. We should need this rarely, as
- # the tricks above for finding the sourced file are pretty robust.
- if [ ! -x "$_sp_prefix/bin/spack" ]; then
- echo "==> Error: SPACK_ROOT must point to spack's prefix when using $_sp_shell"
- echo "Run this with the correct prefix before sourcing setup-env.sh:"
- echo " export SPACK_ROOT=</path/to/spack>"
- return 1
- fi
-fi
-_spack_pathadd PATH "${_sp_prefix%/}/bin"
#
# Check whether a function of the given name is defined
@@ -369,10 +317,13 @@ _sp_multi_pathadd() {
}
_sp_multi_pathadd MODULEPATH "$_sp_tcl_roots"
++export SPACK_ROOT=@@_prefix@@
+
+
# Add programmable tab completion for Bash
#
if [ "$_sp_shell" = bash ]; then
- source $_sp_share_dir/spack-completion.bash
+ source $SPACK_ROOT/share/spack/spack-completion.bash
fi
# done: unset sentinel variable as we're no longer initializing
--
2.26.2

29
Make-spack-paths-compliant-to-distro-installation.patch
View File

@ -1,9 +1,7 @@
From f0ccc0fee51e272776af8b4f85f4b4d2d2854bf7 Mon Sep 17 00:00:00 2001
From: Egbert Eich <eich@suse.com>
Date: Tue Sep 22 09:42:40 2020 +0200
Subject: Make spack paths compliant to distro installation
Patch-mainline: Not yet
Git-commit: 0e7934fd94b6f5ec2059b73d7b17b7e048d61b2d
References:
Date: Tue, 22 Sep 2020 09:42:40 +0200
Subject: [PATCH 2/4] Make spack paths compliant to distro installation
Signed-off-by: Egbert Eich <eich@suse.com>
---
@ -11,11 +9,12 @@ Signed-off-by: Egbert Eich <eich@suse.com>
etc/spack/defaults/repos.yaml | 2 +-
lib/spack/spack/paths.py | 2 +-
3 files changed, 6 insertions(+), 6 deletions(-)
diff --git a/etc/spack/defaults/config.yaml b/etc/spack/defaults/config.yaml
index a572787..cbad1b7 100644
index d1a7f35a6..4813a8a0a 100644
--- a/etc/spack/defaults/config.yaml
+++ b/etc/spack/defaults/config.yaml
@@ -21,7 +21,7 @@ config:
@@ -31,13 +31,13 @@ config:
# Locations where templates should be found
template_dirs:
@ -23,9 +22,6 @@ index a572787..cbad1b7 100644
+ - /usr/share/spack/templates
# Default directory layout
@@ -30,8 +30,8 @@ config:
# Locations where different types of modules should be installed.
module_roots:
- tcl: $spack/share/spack/modules
@ -35,7 +31,7 @@ index a572787..cbad1b7 100644
# Temporary locations Spack can try to use for builds.
@@ -67,7 +67,7 @@ config:
@@ -77,7 +77,7 @@ config:
# Cache directory for already downloaded source tarballs and archived
# repositories. This can be purged with `spack clean --downloads`.
@ -45,7 +41,7 @@ index a572787..cbad1b7 100644
# Cache directory for miscellaneous files, like the package index.
diff --git a/etc/spack/defaults/repos.yaml b/etc/spack/defaults/repos.yaml
index f3e0065..2469194 100644
index f3e00653e..246919425 100644
--- a/etc/spack/defaults/repos.yaml
+++ b/etc/spack/defaults/repos.yaml
@@ -11,4 +11,4 @@
@ -55,15 +51,18 @@ index f3e0065..2469194 100644
- - $spack/var/spack/repos/builtin
+ - /var/lib/spack/repos/builtin
diff --git a/lib/spack/spack/paths.py b/lib/spack/spack/paths.py
index e5541ef..bc8e49d 100644
index 9c803cba7..f16e8ca54 100644
--- a/lib/spack/spack/paths.py
+++ b/lib/spack/spack/paths.py
@@ -37,7 +37,7 @@
@@ -39,7 +39,7 @@
operating_system_path = os.path.join(module_path, 'operating_systems')
test_path = os.path.join(module_path, "test")
hooks_path = os.path.join(module_path, "hooks")
-var_path = os.path.join(prefix, "var", "spack")
+var_path = os.path.join("/", "var", "lib", "spack")
repos_path = os.path.join(var_path, "repos")
tests_path = os.path.join(var_path, "tests")
share_path = os.path.join(prefix, "share", "spack")
--
2.26.2

3
_multibuild Normal file
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@ -0,0 +1,3 @@
<multibuild>
<package>doc</package>
</multibuild>

77
added-dockerfile-for-opensuse-leap-15.patch Normal file
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@ -0,0 +1,77 @@
From d9b88381189ca860cd63c48a53d2298fd8d206db Mon Sep 17 00:00:00 2001
From: Christian Goll <cgoll@suse.de>
Date: Tue, 24 Nov 2020 16:35:32 +0100
Subject: [PATCH 1/2] added dockerfile for opensuse leap 15
---
share/spack/docker/leap-15.dockerfile | 58 +++++++++++++++++++++++++++
1 file changed, 58 insertions(+)
create mode 100644 share/spack/docker/leap-15.dockerfile
diff --git a/share/spack/docker/leap-15.dockerfile b/share/spack/docker/leap-15.dockerfile
new file mode 100644
index 000000000..36054cd44
--- /dev/null
+++ b/share/spack/docker/leap-15.dockerfile
@@ -0,0 +1,58 @@
+FROM opensuse/leap:15.2
+MAINTAINER SUSE HPC <suse-hpc@suse.de>
+
+ENV DOCKERFILE_BASE=opensuse \
+ DOCKERFILE_DISTRO=opensuse_leap \
+ DOCKERFILE_DISTRO_VERSION=15.2 \
+ SPACK_ROOT_DOCKER=/opt/spack \
+ DEBIAN_FRONTEND=noninteractive \
+ CURRENTLY_BUILDING_DOCKER_IMAGE=1 \
+ container=docker
+
+COPY bin $SPACK_ROOT/bin
+COPY etc $SPACK_ROOT/etc
+COPY lib $SPACK_ROOT/lib
+COPY share $SPACK_ROOT/share
+COPY var $SPACK_ROOT/var
+
+
+RUN mkdir -p $SPACK_ROOT/opt/spack
+
+RUN zypper ref && \
+ zypper up -y && \
+ zypper in -y python3-base \
+ xz gzip tar bzip2 curl patch \
+ gcc-c++ make cmake automake&&\
+ zypper clean
+
+# clean up manpages
+RUN rm -rf /var/cache/zypp/* \
+ rm -rf /usr/share/doc/packages/* \
+ rm -rf /usr/share/doc/manual/*
+
+
+RUN mkdir -p /root/.spack \
+ && cp $SPACK_ROOT/share/spack/docker/modules.yaml \
+ /root/.spack/modules.yaml \
+ && rm -rf /root/*.* /run/nologin $SPACK_ROOT/.git
+
+# [WORKAROUND]
+# https://superuser.com/questions/1241548/
+# xubuntu-16-04-ttyname-failed-inappropriate-ioctl-for-device#1253889
+RUN [ -f ~/.profile ] \
+ && sed -i 's/mesg n/( tty -s \\&\\& mesg n || true )/g' ~/.profile \
+ || true
+
+WORKDIR /root
+SHELL ["docker-shell"]
+
+# Find tools which are in distro
+RUN spack external find --scope system
+
+# TODO: add a command to Spack that (re)creates the package cache
+RUN spack spec hdf5+mpi
+
+ENTRYPOINT ["/bin/bash", "/opt/spack/share/spack/docker/entrypoint.bash"]
+CMD ["interactive-shell"]
+
+
--
2.26.2

4
fix-tumbleweed-naming.patch
View File

@ -1,7 +1,7 @@
From dce8997ce770ec420b2946936caf92760638d439 Mon Sep 17 00:00:00 2001
From e752e8f95a5fecf223e2849beeb8bd7cef234c60 Mon Sep 17 00:00:00 2001
From: Christian Goll <cgoll@suse.de>
Date: Wed, 11 Nov 2020 20:29:55 +0100
Subject: [PATCH] fix tumbleweed naming
Subject: [PATCH 1/4] fix tumbleweed naming
---
lib/spack/spack/operating_systems/linux_distro.py | 5 +++++

3
spack-0.15.4.tar.gz
View File

@ -1,3 +0,0 @@
version https://git-lfs.github.com/spec/v1
oid sha256:ce195bc79956675d813cc7837840517135064dcbe211e797b7d171cd8810d31d
size 4805201

3
spack-0.16.0.tar.gz Normal file
View File

@ -0,0 +1,3 @@
version https://git-lfs.github.com/spec/v1
oid sha256:064b2532c70916c7684d4c7c973416ac32dd2ea15f5c392654c75258bfc8c6c2
size 5512800

13
spack-rpmlintrc Normal file
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@ -0,0 +1,13 @@
# Fully intentional
addFilter("hidden-file-or-dir /etc/skel/.spack")
# These files are patches and not to be run directly
addFilter("script-without-shebang")
# These files are installed as part of the spack recipes
# and shouldn't be in a devel package
addFilter("devel-file-in-non-devel-package*")
# The spack group needs to be added to the list of known groups
addFilter("non-standard-group Unspecified")
addFilter("non-standard-gid .* spack")
# Spurious self-applying patches from an upstream source.
# These are part of recipes and not intended to run as scripts.
addFilter("non-executable-script /var/lib/spack/repos.*")

32
spack.changes
View File

@ -1,3 +1,35 @@
-------------------------------------------------------------------
Tue Dec 8 14:19:00 UTC 2020 - Christian Goll <cgoll@suse.com>
- added test for /etc/spack/no_rpm_trigger
-------------------------------------------------------------------
Wed Dec 2 12:33:44 UTC 2020 - Christian Goll <cgoll@suse.com>
- added %triggerin and %triggerpostun for the packages which
can be detected by spack
-------------------------------------------------------------------
Wed Nov 25 10:58:48 UTC 2020 - Christian Goll <cgoll@suse.com>
- updated to 0.16.0
- added find for external packages
- added dockerfile for leap
* added patchfile added-dockerfile-for-opensuse-leap-15.patch
-------------------------------------------------------------------
Tue Nov 24 13:45:24 UTC 2020 - Egbert Eich <eich@suse.com>
- Add documentation (man and info pages, pdf doesn't build
currently).
* Do not ship documentation sources.
- Do not distribute Dockerfiles and other container related
material, yet. This needs to be fixed so that the samples
work with SUSE.
- Fully integrate spack into SUSE directory structure, fix
paths where required.
* Fix setup scripts to work correctly in above environment.
-------------------------------------------------------------------
Mon Nov 16 14:42:32 UTC 2020 - Christian Goll <cgoll@suse.com>

182
spack.spec
View File

@ -15,28 +15,49 @@
# Please submit bugfixes or comments via https://bugs.opensuse.org/
#
%global flavor @BUILD_FLAVOR@%{?nil}
%if "%{flavor}" == "doc"
%bcond_without doc
%endif
%if %{with doc} && (0%{?sle_version} > 0) && (150200 >= 0%{?sle_version})
ExclusiveArch: do_not_build
%endif
%define spack_dir %_prefix/lib/spack/
%define spack_group spack
# These packages are found and can be used by spack, /etc/spack/packages-yaml
# needs to be updated when one of these packages is updated or uninstalled.
# Distinguish between packages we recommend and packages which
%define spack_trigger_recommended autoconf bash bison bzip2 cmake-full ccache cpio diffutils findutils flex gcc gcc-fortran git-lfs make m4 ncurses-devel libtool openssl perl-base pkgconf pkgconf-pkg-config python3-basetar info xz
# packages recognized by spack, but not recommended
%define spack_trigger_packages ghostscript go fish fzf hugo java-11-openjdk-devel java-14-openjdk-devel java-15-openjdk-devel java-16-openjdk-devel java-1_8_0-openjdk-devel ruby
# non oss packages
%define spack_trigger_external cuda-nvcc
Name: spack
Version: 0.15.4
Version: 0.16.0
Release: 0
Summary: Package manager for HPC systems
License: Apache-2.0 AND MIT AND Python-2.0 AND BSD-3-Clause
URL: https://spack.io
Source0: https://github.com/spack/spack/archive/v%{version}.tar.gz#/spack-%{version}.tar.gz
Source0: https://github.com/spack/spack/archive/v%{version}.tar.gz#/spack-%{version}.tar.gz
Source1: README.SUSE
Source1: spack-recipes-rpmlintrc
Source2: spack-rpmlintrc
Patch0: Make-spack-paths-compliant-to-distro-installation.patch
Patch1: fix-tumbleweed-naming.patch
Patch2: Adapt-shell-scripts-that-set-up-the-environment-for-different-shells.patch
Patch3: added-dockerfile-for-opensuse-leap-15.patch
# upstream patch removes also problemtatic binaries
#Patch4: spack-test-15702.patch
%if %{without doc}
BuildRequires: polkit
BuildRequires: fdupes
BuildRequires: python-base
BuildRequires: python3-urllib3
BuildRequires: lua-lmod
Requires: %{name}-recipes = %{version}
Requires: curl
Requires: lua-lmod
Requires: pattern() = devel_basis
Requires: polkit
Requires: gcc-fortran
Requires: gpg2
@ -44,8 +65,25 @@ Requires: xz
Requires: bzip2
Requires: spack-recipes
Recommends: spack-recipes = %version
Recommends: %spack_trigger_recommended
%else
BuildRequires: patterns-base-basesystem
BuildRequires: spack
BuildRequires: makeinfo
BuildRequires: distribution-release
BuildRequires: %{python_module Sphinx >= 1.8}
BuildRequires: %{python_module sphinxcontrib-programoutput}
BuildRequires: git
# html
BuildRequires: graphviz
# info
BuildRequires: graphviz-gnome
## pdf
# BuildRequires: python3-Sphinx-latex
Requires: spack
%endif
BuildArch: noarch
%if 0%{?sle_version} <= 120500 && !0%{?is_opensuse}
%if 0%{?sle_version} <= 120500 && !0%{?is_opensuse}
%define __python3 python3
%endif
@ -77,68 +115,127 @@ using different compilers, options, and MPI implementations.
This package contains the built-in package recipes.
%package man
Summary: Man Page for Spack - Package manager for HPC systems
Requires: man
%description man
Spack is a configurable Python-based HPC package manager, automating
the installation and fine-tuning of simulations and libraries.
It operates on a wide variety of HPC platforms and enables users
to build many code configurations. Software installed by Spack
runs correctly regardless of environment, and file management
is streamlined. Spack can install many variants of the same build
using different compilers, options, and MPI implementations.
This package contains the man page.
%package info
Summary: Info Page for Spack - Package manager for HPC systems
Requires: info
%description info
Spack is a configurable Python-based HPC package manager, automating
the installation and fine-tuning of simulations and libraries.
It operates on a wide variety of HPC platforms and enables users
to build many code configurations. Software installed by Spack
runs correctly regardless of environment, and file management
is streamlined. Spack can install many variants of the same build
using different compilers, options, and MPI implementations.
This package contains the info page.
%prep
%setup -q
%if %{without doc}
%autopatch -p1
# set SPACK_ROOT
for i in share/spack/setup-env.*; do
sed -i -e "s;@@_prefix@@;%_prefix;g" $i
done
%endif
%build
# Nothing to build
%if %{with doc}
cd lib/spack/docs
# Causes issues building texinfo as a suitable image cannot be found
grep -rl ":target:" | xargs sed -i -e "/:target:/s/^/#/" -e "/figure::/s/^/#/"
# Fix path to var - we install this to the 'real' /var
grep -rl "\$SPACK_ROOT/var" | xargs sed -i -e "s@\(.*\)\$SPACK_ROOT/var\(/spack.*\)@\1/var/lib\2@g"
# spack cannot run without knowing at least the compiler
spack compiler find
make man info #text dirhtml
gzip _build/texinfo/Spack.info _build/man/spack.1
%endif
%install
%doc %{S:1}
%if %{without doc}
cp %{S:1} .
# Fix some rpmlint warnings
## Remove files not required to run spack
rm -rf lib/spack/spack/test
rm -rf share/spack/qa
rm -rf share/spack/logo
rm -rf var/spack/repos/builtin.mock var/spack/gpg.mock var/spack/mock_configs
rm -rf lib/spack/external/ruamel/yaml/.ruamel
find . -type f -name .gitignore -delete
find . -type f -name .nojekyll -delete
# Fix _spack_root link
rm -f lib/spack/docs/_spack_root
ln -sf ../.. lib/spack/docs/_spack_root
# Do not ship Docker and container building for now - needs fixing
rm -rf share/spack/{templates/container}
rm -rf share/spack/docker/{centos,ubuntu}*.dockerfile
# Do not ship AWS specifics
rm -f share/spack/setup-tutorial-env.sh
# Fix rpmlint warnings
## No need for the standalone scripts
rm -f lib/spack/external/macholib/macho_*.py
## Fix shebangs
sed -i 's@#!/bin/env sh@#!/bin/bash@' var/spack/repos/builtin/packages/beast-tracer/tracer
sed -i 's@#!/usr/bin/env bash@#!/bin/bash@' share/spack/docker/package-index/split.sh
sed -i 's@#!/bin/env sh@#!/bin/bash@' var/spack/repos/builtin/packages/beast-tracer/tracer
sed -i 's@#! /usr/bin/env bash@ #!/bin/bash@' share/spack/docker/entrypoint.bash
sed -i 's@#!/usr/bin/env bash@#!/bin/bash@' share/spack/docker/package-index/split.sh
mkdir -p %{buildroot}%{spack_dir}
mkdir -p %{buildroot}%{spack_dir}/opt
mkdir -p %{buildroot}%{spack_dir}/bin
mkdir -p %{buildroot}%{_datarootdir}/spack
mkdir -p %{buildroot}%{_datarootdir}/spack/lib/spack
mkdir -p %{buildroot}%{_datarootdir}/spack/modules
mkdir -p %{buildroot}%{_localstatedir}/lib/spack
mkdir -p %{buildroot}%{_localstatedir}/lib/spack/junit-report
mkdir -p %{buildroot}%{_localstatedir}/cache/spack
mkdir -p %{buildroot}%{_sysconfdir}/skel/.spack/
mkdir -p %{buildroot}/%{_bindir}
# Link avoids having to fix paths
ln -sf %{buildroot}/%{_localstatedir}/cache/spack %{buildroot}%{_localstatedir}/lib/spack/cache
# Copy files to corresponding paths
cp -r etc lib %{buildroot}%{spack_dir}
cp -r etc %{buildroot}%{_prefix}
cp -r lib/spack/{env,external,llnl,spack} %{buildroot}%{spack_dir}
cp -r share/spack/* %{buildroot}%{_datarootdir}/spack
cp -r var/spack/* %{buildroot}%{_localstatedir}/lib/spack
cp -r bin/sbang %{buildroot}/%{_bindir}
cp -r bin/spack* %{buildroot}%{spack_dir}/bin
cp -r bin/spack* %{buildroot}%{_bindir}/
cp etc/spack/defaults/config.yaml %{buildroot}%{_sysconfdir}/skel/.spack/
sed -i 's@\(\sinstall_tree:\).*@\1 ~/spack/packages@' %{buildroot}%{_sysconfdir}/skel/.spack/config.yaml
# Fix more paths
sed -i 's@\(\sroot:\) $spack/opt/spack@\1 ~/spack/packages@' %{buildroot}%{_sysconfdir}/skel/.spack/config.yaml
sed -i 's@\(\ssource_cache:\).*@\1 /var/tmp/$user/spack-cache@' %{buildroot}%{_sysconfdir}/skel/.spack/config.yaml
sed -i 's@\(\stcl:\).*@\1 ~/spack/modules@' %{buildroot}%{_sysconfdir}/skel/.spack/config.yaml
sed -i 's@\(\slmod:\).*@\1 ~/spack/lmod@' %{buildroot}%{_sysconfdir}/skel/.spack/config.yaml
cat >> %{buildroot}%{_sysconfdir}/skel/.spack/config.yaml <<EOF
# Timeout in seconds used for downloading sources etc. This only applies
# to the connection phase and can be increased for slow connections or
# servers. 0 means no timeout.
binary_index_root: ~/.spack/indices
EOF
# create spack scripts
echo -e '#!/bin/bash\n\nexec %{spack_dir}bin/$(basename $0) "${1+$@}"' > \
%{buildroot}%{_bindir}/spack
chmod 0755 %{buildroot}%{_bindir}/spack
ln -s spack %{buildroot}%{_bindir}/spack-python
ln -s %{_bindir}/sbang %{buildroot}%{spack_dir}/bin/sbang
# compile python files for python3
# %%{buildroot}%%{spack_dir}/spack
%py_compile .
# make shell scripts executeable
@ -223,13 +320,24 @@ modules:
all: '{compiler.name}-{compiler.version}/{name}/{version}'
^mpi: '{compiler.name}-{compiler.version}/{^mpi.name}-{^mpi.version}/{name}/{version}'
EOF
mkdir -p %{buildroot}%{_sysconfdir}/spack
# Fix link to not point into buildroot
rm -f %{buildroot}%{_localstatedir}/lib/spack/cache
ln -sf %{_localstatedir}/cache/spack %{buildroot}%{_localstatedir}/lib/spack/cache
# Remove problematic binaries which are removed upstream with
# 0889be20e0d9dcdf4346cdeaa0647285187375f3
rm -r %{buildroot}%{_localstatedir}/lib/spack/repos/builtin/packages/patchelf/test/
%fdupes %{buildroot}%{spack_dir}
%fdupes %{buildroot}%{_datarootdir}/spack
%fdupes %{buildroot}%{_localstatedir}/lib/spack
%else
mkdir -p %{buildroot}%{_infodir}
mkdir -p %{buildroot}%{_mandir}/man1
cd lib/spack/docs/_build
cp man/spack.1.gz %{buildroot}%{_mandir}/man1/
cp -r texinfo/Spack.info.gz texinfo/Spack-figures %{buildroot}%{_infodir}
%endif
%pre
getent group %spack_group >/dev/null || groupadd -r %spack_group
@ -254,16 +362,33 @@ if [ -e /etc/os-release ] ; then
sed -i "s@SUSE_VERSION@$SPACK_NAME@g" /etc/profile.d/spack.sh
fi
sed -i "s@HOSTTYPE@$HOSTTYPE@" %{spack_dir}/etc/spack/compilers.yaml
# find installed programms
test -e %{_sysconfdir}/spack/no_rpm_trigger || spack external find --scope system
%triggerin -- %{?spack_trigger_recommended} %{?spack_trigger_packages} %{?spack_trigger_external}
test -e %{_sysconfdir}/spack/no_rpm_trigger || spack external find --scope system
test -e %{_sysconfdir}/spack/no_rpm_trigger || echo "Create %{_sysconfdir}/spack/no_rpm_trigger to stop spack to search for new packages after a rpm install"
%triggerpostun -- %{?spack_trigger_recommended} %{?spack_trigger_packages} %{?spack_trigger_external}
test -e %{_sysconfdir}/spack/no_rpm_trigger || rm /etc/spack/packages.yaml
test -e %{_sysconfdir}/spack/no_rpm_trigger || spack external find --scope system
test -e %{_sysconfdir}/spack/no_rpm_trigger || echo "Create %{_sysconfdir}/spack/no_rpm_trigger to stop spack to search for new packages after a rpm install"
%if %{without doc}
%files
%license COPYRIGHT LICENSE-APACHE LICENSE-MIT
%doc CHANGELOG.md NOTICE README.md
%doc CHANGELOG.md NOTICE README.md README.SUSE
%dir %{_sysconfdir}/spack/
%{_bindir}/*
%if 0%{?suse_version} <= 1500
%dir %{_prefix}/etc
%endif
%{_prefix}/etc/spack
%attr(0775, root, spack) %{_localstatedir}/lib/spack/junit-report
%attr(0775, root, spack) %{spack_dir}/opt
%attr(0775, root, spack) %{_localstatedir}/cache/spack
%attr(0775, root, spack) %{_datarootdir}/spack/modules
%{_prefix}/lib/spack
%{spack_dir}
%{_localstatedir}/cache/spack
%{_localstatedir}/lib/spack
%{_datarootdir}/spack
@ -274,11 +399,18 @@ sed -i "s@HOSTTYPE@$HOSTTYPE@" %{spack_dir}/etc/spack/compilers.yaml
# repos directory is installed in -recipes
%exclude %{_localstatedir}/lib/spack/repos
%files recipes
%license COPYRIGHT LICENSE-APACHE LICENSE-MIT
%doc CHANGELOG.md NOTICE README.md
%{_localstatedir}/lib/spack/repos
%else
%files man
%{_mandir}/man1/*
%files info
%{_infodir}/*
%endif
%changelog