Accepting request 869487 from home:eeich:branches:network:cluster
- Add * Fix-documentation-so-that-parser-doesn-t-stumble.patch: * Fix-error-during-documentation-build-due-to-recursive-module-inclusion.patch Fix documentation building. - Fix texinfo file installation. OBS-URL: https://build.opensuse.org/request/show/869487 OBS-URL: https://build.opensuse.org/package/show/network:cluster/spack?expand=0&rev=7
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Fix-documentation-so-that-parser-doesn-t-stumble.patch
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Fix-documentation-so-that-parser-doesn-t-stumble.patch
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@ -0,0 +1,40 @@
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From: Egbert Eich <eich@suse.com>
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Date: Thu Feb 4 07:51:10 2021 +0100
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Subject: Fix documentation so that parser doesn't stumble
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Patch-mainline: Not yet
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Git-commit: 7e787fef5e2c87c53166ee71670f1787300cced3
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References:
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Add argument to code-block::
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Signed-off-by: Egbert Eich <eich@suse.com>
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---
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lib/spack/docs/build_systems/autotoolspackage.rst | 2 +-
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lib/spack/docs/build_systems/pythonpackage.rst | 2 +-
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2 files changed, 2 insertions(+), 2 deletions(-)
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diff --git a/lib/spack/docs/build_systems/autotoolspackage.rst b/lib/spack/docs/build_systems/autotoolspackage.rst
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index a4c15e5..21913a6 100644
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--- a/lib/spack/docs/build_systems/autotoolspackage.rst
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+++ b/lib/spack/docs/build_systems/autotoolspackage.rst
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@@ -348,7 +348,7 @@ Defining ``with_or_without_verbs`` overrides the behavior of a
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``--with-openib`` for older versions of the package and specifying an
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alternative dependency name:
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-.. code-block::
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+.. code-block:: console
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--with-openib=</path/to/rdma-core>
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diff --git a/lib/spack/docs/build_systems/pythonpackage.rst b/lib/spack/docs/build_systems/pythonpackage.rst
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index c2da028..695b446 100644
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--- a/lib/spack/docs/build_systems/pythonpackage.rst
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+++ b/lib/spack/docs/build_systems/pythonpackage.rst
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@@ -90,7 +90,7 @@ Instead of using the ``PythonPackage`` base class, you should extend
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the ``Package`` base class and implement the following custom installation
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procedure:
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-.. code-block::
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+.. code-block:: python
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def install(self, spec, prefix):
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pip = which('pip')
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@ -0,0 +1,40 @@
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From: Egbert Eich <eich@suse.com>
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Date: Thu Feb 4 09:17:55 2021 +0100
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Subject: Fix error during documentation build due to recursive module inclusion
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Patch-mainline: Not yet
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Git-commit: 7102b892cfc6e0697b658f35b7774a03bd1c42e9
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References:
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Signed-off-by: Egbert Eich <eich@suse.com>
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---
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lib/spack/spack/user_environment.py | 6 +++---
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1 file changed, 3 insertions(+), 3 deletions(-)
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diff --git a/lib/spack/spack/user_environment.py b/lib/spack/spack/user_environment.py
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index f08f21e..0da6c43 100644
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--- a/lib/spack/spack/user_environment.py
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+++ b/lib/spack/spack/user_environment.py
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@@ -8,7 +8,7 @@
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import spack.config
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import spack.util.prefix as prefix
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import spack.util.environment as environment
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-import spack.build_environment as build_env
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+import spack.build_environment
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#: Environment variable name Spack uses to track individually loaded packages
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spack_loaded_hashes_var = 'SPACK_LOADED_HASHES'
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@@ -85,13 +85,13 @@ def environment_modifications_for_spec(spec, view=None):
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# Let the extendee/dependency modify their extensions/dependents
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# before asking for package-specific modifications
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env.extend(
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- build_env.modifications_from_dependencies(
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+ build_environment.modifications_from_dependencies(
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spec, context='run'
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)
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)
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# Package specific modifications
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- build_env.set_module_variables_for_package(spec.package)
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+ build_environment.set_module_variables_for_package(spec.package)
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spec.package.setup_run_environment(env)
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return env
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@ -1,3 +1,12 @@
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-------------------------------------------------------------------
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Thu Feb 4 06:54:13 UTC 2021 - Egbert Eich <eich@suse.com>
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- Add
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* Fix-documentation-so-that-parser-doesn-t-stumble.patch:
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* Fix-error-during-documentation-build-due-to-recursive-module-inclusion.patch
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Fix documentation building.
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- Fix texinfo file installation.
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-------------------------------------------------------------------
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Fri Dec 11 15:09:07 UTC 2020 - Christian Goll <cgoll@suse.com>
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42
spack.spec
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spack.spec
@ -1,7 +1,7 @@
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#
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# spec file for package spack
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#
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# Copyright (c) 2020 SUSE LLC
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# Copyright (c) 2021 SUSE LLC
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#
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# All modifications and additions to the file contributed by third parties
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# remain the property of their copyright owners, unless otherwise agreed
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@ -15,6 +15,7 @@
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# Please submit bugfixes or comments via https://bugs.opensuse.org/
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#
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%global flavor @BUILD_FLAVOR@%{?nil}
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%if "%{flavor}" == "doc"
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%bcond_without doc
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@ -38,7 +39,7 @@ Name: spack
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Version: 0.16.0
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Release: 0
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Summary: Package manager for HPC systems
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License: Apache-2.0 AND MIT AND Python-2.0 AND BSD-3-Clause
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License: Apache-2.0 AND MIT AND Python-2.0 AND BSD-3-Clause
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URL: https://spack.io
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Source0: https://github.com/spack/spack/archive/v%{version}.tar.gz#/spack-%{version}.tar.gz
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Source1: README.SUSE
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@ -48,33 +49,35 @@ Patch1: fix-tumbleweed-naming.patch
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Patch2: Adapt-shell-scripts-that-set-up-the-environment-for-different-shells.patch
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Patch3: added-dockerfile-for-opensuse-leap-15.patch
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Patch4: added-target-and-os-calls-to-output-of-spack-spec-co.patch
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Patch5: Fix-documentation-so-that-parser-doesn-t-stumble.patch
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Patch6: Fix-error-during-documentation-build-due-to-recursive-module-inclusion.patch
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# upstream patch removes also problemtatic binaries
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#Patch4: spack-test-15702.patch
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%if %{without doc}
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BuildRequires: polkit
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BuildRequires: fdupes
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BuildRequires: lua-lmod
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BuildRequires: polkit
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BuildRequires: python-base
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BuildRequires: python3-urllib3
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BuildRequires: lua-lmod
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Requires: %{name}-recipes = %{version}
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Requires: bzip2
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Requires: curl
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Requires: lua-lmod
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Requires: polkit
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Requires: gcc-fortran
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Requires: gpg2
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Requires: xz
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Requires: bzip2
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Requires: lua-lmod
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Requires: polkit
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Requires: spack-recipes
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Requires: xz
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Recommends: spack-recipes = %version
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Recommends: %spack_trigger_recommended
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%else
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BuildRequires: patterns-base-basesystem
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BuildRequires: spack
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BuildRequires: makeinfo
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BuildRequires: distribution-release
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BuildRequires: %{python_module Sphinx >= 1.8}
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BuildRequires: %{python_module sphinxcontrib-programoutput}
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BuildRequires: distribution-release
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BuildRequires: git
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BuildRequires: makeinfo
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BuildRequires: patterns-base-basesystem
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BuildRequires: spack
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# html
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BuildRequires: graphviz
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# info
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@ -88,7 +91,6 @@ BuildArch: noarch
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%define __python3 python3
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%endif
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%description
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Spack is a configurable Python-based HPC package manager, automating
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the installation and fine-tuning of simulations and libraries.
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@ -252,7 +254,6 @@ cat >> %{buildroot}%{_sysconfdir}/skel/.spack/config.yaml <<EOF
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binary_index_root: ~/.spack/indices
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EOF
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# compile python files for python3
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# %%{buildroot}%%{spack_dir}/spack
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%py_compile .
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@ -355,13 +356,13 @@ mkdir -p %{buildroot}%{_infodir}
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mkdir -p %{buildroot}%{_mandir}/man1
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cd lib/spack/docs/_build
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cp man/spack.1.gz %{buildroot}%{_mandir}/man1/
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cp -r texinfo/Spack.info.gz texinfo/Spack-figures %{buildroot}%{_infodir}
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cp -r texinfo/Spack.info.gz %{buildroot}%{_infodir}
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[ -d texinfo/Spack-figures ] && cp -r texinfo/Spack-figures %{buildroot}%{_infodir}
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%endif
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%pre
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getent group %spack_group >/dev/null || groupadd -r %spack_group
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%post
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# Replace /etc/spack/compilers.yaml
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export GCC_VERSION=`gcc -dumpversion`
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@ -387,12 +388,12 @@ test -e %{_sysconfdir}/spack/no_rpm_trigger || spack external find --scope syste
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%triggerin -- %{?spack_trigger_recommended} %{?spack_trigger_packages} %{?spack_trigger_external}
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test -e %{_sysconfdir}/spack/no_rpm_trigger || spack external find --scope system
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test -e %{_sysconfdir}/spack/no_rpm_trigger || echo "Create %{_sysconfdir}/spack/no_rpm_trigger to stop spack to search for new packages after a rpm install"
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%triggerpostun -- %{?spack_trigger_recommended} %{?spack_trigger_packages} %{?spack_trigger_external}
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test -e %{_sysconfdir}/spack/no_rpm_trigger || rm /etc/spack/packages.yaml
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test -e %{_sysconfdir}/spack/no_rpm_trigger || spack external find --scope system
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test -e %{_sysconfdir}/spack/no_rpm_trigger || echo "Create %{_sysconfdir}/spack/no_rpm_trigger to stop spack to search for new packages after a rpm install"
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%if %{without doc}
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%files
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%license COPYRIGHT LICENSE-APACHE LICENSE-MIT
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@ -424,6 +425,13 @@ test -e %{_sysconfdir}/spack/no_rpm_trigger || echo "Create %{_sysconfdir}/spack
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%{_localstatedir}/lib/spack/repos
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%else
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%post info
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%install_info --info-dir=%{_infodir} --info-file="%{_infodir}/Spack.info.gz"
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%preun info
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%install_info_delete --info-dir=%{_infodir} --info-file="%{_infodir}/Spack.info.gz"
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%files man
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%{_mandir}/man1/*
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