This commit is contained in:
Todd R
Git OBS Bridge
parent
84d0eda25e
commit
f4d2dd3913
@ -1,10 +1,8 @@
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This version of SuperLU is slightly different form the original SuperLU
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available on http://crd.lbl.gov/~xiaoye/SuperLU/. For legal reasons the
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routine mc64ad from the Harwell Subroutine Library cannot be redistributed
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by openSUSE and have been removed form the sources.
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mc64ad.c sgsisx.c sldperm.c dgsisx.c dldperm.c cgsisx.c cldperm.c zgsisx.c zldperm.c
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were removed from the tarball.
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by openSUSE and have been removed form the sources. Only SRC/mc64ad.c was
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removed from the tarball.
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However the SuperLU library provided by openSUSE is fully functionnal
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except that the mc64ad routine is not used.
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@ -1,4 +0,0 @@
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<multibuild>
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<package>gnu-hpc</package>
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<package>serial</package>
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</multibuild>
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1
baselibs.conf
Normal file
1
baselibs.conf
Normal file
@ -0,0 +1 @@
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libsuperlu5
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@ -1,29 +0,0 @@
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#!/bin/bash
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set -e
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VERSION=5.3.0
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FILES="mc64ad.c sgsisx.c sldperm.c dgsisx.c dldperm.c cgsisx.c cldperm.c zgsisx.c zldperm.c"
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URL="https://github.com/xiaoyeli/superlu/archive/v$VERSION/superlu-$VERSION.tar.gz"
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TAR="superlu-$VERSION.tar.gz"
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WORKDIR="$(mktemp -d superlu.XXXX)"
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TODIR="$(pwd)"
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cd "$WORKDIR"
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wget $URL
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tar xfz superlu-$VERSION.tar.gz
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for file in $FILES; do
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rm superlu-$VERSION/SRC/$file
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done
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if [ -e "$TODIR/$TAR" ]; then
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echo "$TAR already exists."
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else
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tar cfz "$TODIR/$TAR" superlu-$VERSION
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fi
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cd "$TODIR"
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rm -r "$WORKDIR"
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20
superlu-4.3-dont-opt-away.diff
Normal file
20
superlu-4.3-dont-opt-away.diff
Normal file
@ -0,0 +1,20 @@
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diff -aruN SuperLU_4.3.orig/INSTALL/timertst.c SuperLU_4.3/INSTALL/timertst.c
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--- SuperLU_4.3.orig/INSTALL/timertst.c 2011-10-27 21:49:47.000000000 +0200
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+++ SuperLU_4.3/INSTALL/timertst.c 2012-12-20 21:55:13.954437737 +0100
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@@ -6,6 +6,8 @@
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return;
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}
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+volatile double _dummy;
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+
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int main()
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{
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/* Parameters */
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@@ -32,6 +34,7 @@
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for (j = 0; j < iters; ++j) {
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for (i = 0; i < NMAX; ++i) y[i] += alpha * x[i];
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alpha = -alpha;
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+ _dummy = y[j%NMAX];
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}
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t2 = SuperLU_timer_();
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tnotim = t2 - t1;
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22
superlu-4.3-include.patch
Normal file
22
superlu-4.3-include.patch
Normal file
@ -0,0 +1,22 @@
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diff -aruN SuperLU_4.3.orig/TESTING/ddrive.c SuperLU_4.3/TESTING/ddrive.c
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--- SuperLU_4.3.orig/TESTING/ddrive.c 2011-10-27 21:49:47.000000000 +0200
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+++ SuperLU_4.3/TESTING/ddrive.c 2012-12-20 22:14:43.026465899 +0100
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@@ -11,6 +11,7 @@
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* Purpose: MAIN test program
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*/
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#include <string.h>
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+#include <unistd.h>
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#include "slu_ddefs.h"
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#define NTESTS 5 /* Number of test types */
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diff -aruN SuperLU_4.3.orig/TESTING/sdrive.c SuperLU_4.3/TESTING/sdrive.c
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--- SuperLU_4.3.orig/TESTING/sdrive.c 2011-10-27 21:49:47.000000000 +0200
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+++ SuperLU_4.3/TESTING/sdrive.c 2012-12-20 22:14:43.030465752 +0100
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@@ -11,6 +11,7 @@
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* Purpose: MAIN test program
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*/
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#include <string.h>
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+#include <unistd.h>
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#include "slu_sdefs.h"
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#define NTESTS 5 /* Number of test types */
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@ -1,15 +1,14 @@
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diff -Nrua a/SRC/CMakeLists.txt b/SRC/CMakeLists.txt
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--- a/SRC/CMakeLists.txt
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+++ b/SRC/CMakeLists.txt
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@@ -21,7 +21,6 @@
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--- a/SRC/CMakeLists.txt 2016-05-29 13:57:44.683251096 +0200
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+++ b/SRC/CMakeLists.txt 2016-05-29 13:57:31.570987497 +0200
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@@ -22,7 +22,6 @@
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ilu_relax_snode.c
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ilu_heap_relax_snode.c
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mark_relax.c
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- mc64ad.c
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qselect.c
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input_error.c
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dmach.c
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@@ -65,9 +64,7 @@
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)
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@@ -63,9 +62,7 @@
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smemory.c
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sutil.c
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smyblas2.c
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@ -19,7 +18,7 @@ diff -Nrua a/SRC/CMakeLists.txt b/SRC/CMakeLists.txt
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ilu_sdrop_row.c
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ilu_ssnode_dfs.c
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ilu_scolumn_dfs.c
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@@ -115,9 +112,7 @@
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@@ -112,9 +109,7 @@
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dmemory.c
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dutil.c
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dmyblas2.c
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@ -29,7 +28,7 @@ diff -Nrua a/SRC/CMakeLists.txt b/SRC/CMakeLists.txt
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ilu_ddrop_row.c
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ilu_dsnode_dfs.c
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ilu_dcolumn_dfs.c
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@@ -168,9 +163,7 @@
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@@ -163,9 +158,7 @@
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cmemory.c
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cutil.c
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cmyblas2.c
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@ -39,7 +38,7 @@ diff -Nrua a/SRC/CMakeLists.txt b/SRC/CMakeLists.txt
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ilu_cdrop_row.c
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ilu_csnode_dfs.c
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ilu_ccolumn_dfs.c
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@@ -219,9 +212,7 @@
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@@ -213,9 +206,7 @@
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zmemory.c
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zutil.c
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zmyblas2.c
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@ -1,3 +0,0 @@
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version https://git-lfs.github.com/spec/v1
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oid sha256:c347397f791eb8cb18b557dfe8ed83eaed5638a59c7335808b3949673b35c0a3
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size 2468947
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@ -1,113 +0,0 @@
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diff -Nrua a/EXAMPLE/Makefile b/EXAMPLE/Makefile
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--- a/EXAMPLE/Makefile
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+++ b/EXAMPLE/Makefile
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@@ -39,8 +39,6 @@
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SLINXEXM1 = slinsolx1.o
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SLINXEXM2 = slinsolx2.o
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SLINXEXM3 = slinsolx3.o
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-SITSOL = sitersol.o sfgmr.o
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-SITSOL1 = sitersol1.o sfgmr.o
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DLINEXM = dlinsol.o
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DLINEXM1 = dlinsol1.o
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@@ -49,8 +47,6 @@
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DLINXEXM2 = dlinsolx2.o
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DLINXEXM3 = dlinsolx3.o
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SUPERLUEXM = superlu.o sp_ienv.o
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-DITSOL = ditersol.o dfgmr.o
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-DITSOL1 = ditersol1.o dfgmr.o
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CLINEXM = clinsol.o
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CLINEXM1 = clinsol1.o
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@@ -58,8 +54,6 @@
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CLINXEXM1 = clinsolx1.o
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CLINXEXM2 = clinsolx2.o
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CLINXEXM3 = clinsolx3.o
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-CITSOL = citersol.o cfgmr.o
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-CITSOL1 = citersol1.o cfgmr.o
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ZLINEXM = zlinsol.o
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ZLINEXM1 = zlinsol1.o
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@@ -67,20 +61,17 @@
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ZLINXEXM1 = zlinsolx1.o
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ZLINXEXM2 = zlinsolx2.o
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ZLINXEXM3 = zlinsolx3.o
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-ZITSOL = zitersol.o zfgmr.o
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-ZITSOL1 = zitersol1.o zfgmr.o
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all: single double complex complex16
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-single: slinsol slinsol1 slinsolx slinsolx1 slinsolx2 slinsolx3 \
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- sitersol sitersol1
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+single: slinsol slinsol1 slinsolx slinsolx1 slinsolx2 slinsolx3
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+
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double: dlinsol dlinsol1 dlinsolx dlinsolx1 dlinsolx2 dlinsolx3 \
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- superlu ditersol ditersol1
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-complex: clinsol clinsol1 clinsolx clinsolx1 clinsolx2 clinsolx3 \
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- citersol citersol1
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-complex16: zlinsol zlinsol1 zlinsolx zlinsolx1 zlinsolx2 zlinsolx3 \
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- zitersol zitersol1
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+ superlu
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+complex: clinsol clinsol1 clinsolx clinsolx1 clinsolx2 clinsolx3
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+
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+complex16: zlinsol zlinsol1 zlinsolx zlinsolx1 zlinsolx2 zlinsolx3
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slinsol: $(SLINEXM) $(SUPERLULIB)
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$(LOADER) $(LOADOPTS) $(SLINEXM) $(LIBS) -lm -o $@
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@@ -100,11 +91,6 @@
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slinsolx3: $(SLINXEXM3) $(SUPERLULIB)
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$(LOADER) $(LOADOPTS) $(SLINXEXM3) $(LIBS) -lm -o $@
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-sitersol: $(SITSOL) $(SUPERLULIB)
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- $(LOADER) $(LOADOPTS) $(SITSOL) $(LIBS) -lm -o $@
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-
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-sitersol1: $(SITSOL1) $(SUPERLULIB)
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- $(LOADER) $(LOADOPTS) $(SITSOL1) $(LIBS) -lm -o $@
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dlinsol: $(DLINEXM) $(SUPERLULIB)
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$(LOADER) $(LOADOPTS) $(DLINEXM) $(LIBS) -lm -o $@
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@@ -127,12 +113,6 @@
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superlu: $(SUPERLUEXM) $(SUPERLULIB)
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$(LOADER) $(LOADOPTS) $(SUPERLUEXM) $(LIBS) -lm -o $@
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-ditersol: $(DITSOL) $(SUPERLULIB)
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- $(LOADER) $(LOADOPTS) $(DITSOL) $(LIBS) -lm -o $@
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-
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-ditersol1: $(DITSOL1) $(SUPERLULIB)
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- $(LOADER) $(LOADOPTS) $(DITSOL1) $(LIBS) -lm -o $@
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-
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clinsol: $(CLINEXM) $(SUPERLULIB)
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$(LOADER) $(LOADOPTS) $(CLINEXM) $(LIBS) -lm -o $@
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@@ -151,12 +131,6 @@
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clinsolx3: $(CLINXEXM3) $(SUPERLULIB)
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$(LOADER) $(LOADOPTS) $(CLINXEXM3) $(LIBS) -lm -o $@
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-citersol: $(CITSOL) $(SUPERLULIB)
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- $(LOADER) $(LOADOPTS) $(CITSOL) $(LIBS) -lm -o $@
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-
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-citersol1: $(CITSOL1) $(SUPERLULIB)
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- $(LOADER) $(LOADOPTS) $(CITSOL1) $(LIBS) -lm -o $@
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-
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zlinsol: $(ZLINEXM) $(SUPERLULIB)
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$(LOADER) $(LOADOPTS) $(ZLINEXM) $(LIBS) -lm -o $@
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@@ -175,11 +149,6 @@
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zlinsolx3: $(ZLINXEXM3) $(SUPERLULIB)
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$(LOADER) $(LOADOPTS) $(ZLINXEXM3) $(LIBS) -lm -o $@
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-zitersol: $(ZITSOL) $(SUPERLULIB)
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- $(LOADER) $(LOADOPTS) $(ZITSOL) $(LIBS) -lm -o $@
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-
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-zitersol1: $(ZITSOL1) $(SUPERLULIB)
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- $(LOADER) $(LOADOPTS) $(ZITSOL1) $(LIBS) -lm -o $@
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.c.o:
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$(CC) $(CFLAGS) $(CDEFS) $(INCLUDEDIR) -c $< $(VERBOSE)
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@@ -189,7 +158,7 @@
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clean:
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rm -f *.o *linsol *linsol1 *linsolx *linsolx1 *linsolx2 *linsolx3 \
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- superlu *itersol *itersol1
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+ superlu
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@ -1,14 +0,0 @@
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diff -Nrua a/MAKE_INC/make.linux b/MAKE_INC/make.linux
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--- a/MAKE_INC/make.linux
|
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+++ b/MAKE_INC/make.linux
|
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@@ -21,8 +21,8 @@
|
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#
|
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# The name of the libraries to be created/linked to
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#
|
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-SuperLUroot = $(HOME)/Dropbox/Codes/SuperLU/SuperLU
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-SUPERLULIB = $(SuperLUroot)/lib/libsuperlu_5.1.a
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+SuperLUroot = @superlu_home@
|
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+SUPERLULIB = @superlu_lib@
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#BLASLIB = $(SuperLUroot)/lib/libblas.a
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135
superlu.changes
135
superlu.changes
@ -1,111 +1,3 @@
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-------------------------------------------------------------------
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Thu Sep 30 19:47:48 UTC 2021 - Antoine Ginies <aginies@suse.com>
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- update to version 5.3.0 (JSC#SLE-22138)
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-------------------------------------------------------------------
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Thu Jan 28 17:45:16 UTC 2021 - Egbert Eich <eich@suse.com>
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- Change 'Requires:' to other HPC packages to %requires_eq to depend
|
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on the exact version. This should take care of HPC packages ignoring
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proper ABI versioning.
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-------------------------------------------------------------------
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Mon Nov 16 14:41:49 UTC 2020 - Ana Guerrero Lopez <aguerrero@suse.com>
|
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- Fix package name, re-add lines removed by mistake.
|
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This fix duplicate binary names. (boo#1178840)
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-------------------------------------------------------------------
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Mon Oct 26 14:11:13 UTC 2020 - Ana Guerrero Lopez <aguerrero@suse.com>
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- New version 5.2.2 (boo#1178112)
|
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- bugfixes, documentation and examples update.
|
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- Update URL and Source0 and Source1, use get_tarball.sh to remove
|
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non distributable files.
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- Install superlu_ug.pdf provided by the tarball.
|
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- Remove patch, merged upstream
|
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* superlu-4.3-include.patch
|
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* superlu-4.3-dont-opt-away.diff
|
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* superlu-5.2-make.patch
|
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- Refresh patch:
|
||||
* superlu-examples_Makefile_remove_itersol.patch
|
||||
* superlu-make.linux.patch
|
||||
|
||||
-------------------------------------------------------------------
|
||||
Fri Sep 11 06:13:46 UTC 2020 - Egbert Eich <eich@suse.com>
|
||||
|
||||
- Add build support for gcc10 to HPC build (bsc#1174439).
|
||||
|
||||
-------------------------------------------------------------------
|
||||
Wed Feb 26 12:30:51 UTC 2020 - Egbert Eich <eich@suse.com>
|
||||
|
||||
- Add support for gcc8/9 building (jsc#SLE-8604).
|
||||
|
||||
-------------------------------------------------------------------
|
||||
Thu Feb 14 09:16:02 UTC 2019 - Jan Engelhardt <jengelh@inai.de>
|
||||
|
||||
- Fix the package group fix.
|
||||
|
||||
-------------------------------------------------------------------
|
||||
Sun Feb 10 23:11:37 UTC 2019 - Egbert Eich <eich@suse.com>
|
||||
|
||||
- Fix dependencies.
|
||||
- Fix %%post and %%postun scripts for HPC.
|
||||
- Fix HPC modulefile.
|
||||
- Fix package groups.
|
||||
- Generate and add pkgconfig files.
|
||||
|
||||
-------------------------------------------------------------------
|
||||
Fri Feb 8 10:50:43 UTC 2019 - eich@suse.com
|
||||
|
||||
- Set default module version correctly when installing
|
||||
master package, unset when deinstalling the default library
|
||||
package.
|
||||
- make example make.inc work with non-HPC builds as well.
|
||||
|
||||
-------------------------------------------------------------------
|
||||
Fri Feb 8 09:40:33 UTC 2019 - Antoine Ginies <aginies@suse.com>
|
||||
|
||||
- Add superlu-examples_Makefile_remove_itersol.patch
|
||||
superlu-make.linux.patch:
|
||||
get a buildable examples test suite (bsc#1124765)
|
||||
fixing Makefile
|
||||
adding missing make.inc
|
||||
|
||||
-------------------------------------------------------------------
|
||||
Tue Jan 22 11:58:01 UTC 2019 - eich@suse.com
|
||||
|
||||
- Disable HPC builds for ring testing on Factory submissions.
|
||||
|
||||
-------------------------------------------------------------------
|
||||
Mon Jan 21 15:09:13 UTC 2019 - eich@suse.com
|
||||
|
||||
- Fix a word in a comment.
|
||||
- Remove some colloquialism from a package description.
|
||||
|
||||
-------------------------------------------------------------------
|
||||
Fri Jan 18 14:46:44 UTC 2019 - eich@suse.com
|
||||
|
||||
- Reenable ldconfig in %post and %postun for HPC but don't let it
|
||||
update the cache: this would be pointless for libraries in
|
||||
non-standard locations.
|
||||
|
||||
-------------------------------------------------------------------
|
||||
Thu Jan 10 09:31:45 UTC 2019 - eich@suse.com
|
||||
|
||||
- Moved HPC module from devel to library package.
|
||||
- Modified summary for devel package.
|
||||
|
||||
-------------------------------------------------------------------
|
||||
Fri Oct 26 19:55:59 UTC 2018 - eich@suse.com
|
||||
|
||||
- Add environment module support for HPC.
|
||||
* create baselib.conf on the fly.
|
||||
- Add superlu-5.2-make.patch:
|
||||
add compiler and build flags in make.inc.
|
||||
- Separate off documentation and examples to separate packages.
|
||||
|
||||
-------------------------------------------------------------------
|
||||
Tue Jun 14 12:56:22 UTC 2016 - badshah400@gmail.com
|
||||
|
||||
@ -136,7 +28,7 @@ Tue Jan 15 21:14:51 UTC 2013 - scorot@free.fr
|
||||
|
||||
- repackage original source tarball in order to remove the
|
||||
HSL mc64ad routine that caonnt be redistributed bnc#796236
|
||||
- add README.SUSE file in the %%doci in order to explain
|
||||
- add README.SUSE file in the %%doci in order to explain
|
||||
that change
|
||||
|
||||
-------------------------------------------------------------------
|
||||
@ -167,14 +59,14 @@ Tue Dec 18 22:21:27 UTC 2012 - scorot@free.fr
|
||||
for both superlu & superlu_dist.
|
||||
* Replace qsort by "quick select" (qselect) in ILU's secondary
|
||||
dropping.
|
||||
* Replace mc64ad.f by mc64ad.c using f2c.
|
||||
* Replace mc64ad.f by mc64ad.c using f2c.
|
||||
* Bug fixes in ilu_sdrop_row.c.
|
||||
* Bug fixes in xgsisx.c, so that when mc64 permutation is used
|
||||
in ILU, the right-hand side is permuted properly.
|
||||
* Add parameter #7 in sp_ienv(), setting as the maxsuper for ILU
|
||||
code (smaller than parameter #3).
|
||||
* Update Users Guide.
|
||||
* Update doxygen code documentation.
|
||||
* Update doxygen code documentation.
|
||||
* Fix a bug in ILU driver routine dgsisx.c, so that on return,
|
||||
the initial row permutation is combined with perm_r[] from
|
||||
partial pivoting.
|
||||
@ -194,7 +86,7 @@ Tue Dec 18 22:21:27 UTC 2012 - scorot@free.fr
|
||||
- Add %%ckeck
|
||||
- Update documentation file %%source1 and put html and examples
|
||||
files in %%doc
|
||||
- Spec file reformating
|
||||
- Spec file reformating
|
||||
|
||||
-------------------------------------------------------------------
|
||||
Sun Jan 29 01:48:27 UTC 2012 - jengelh@medozas.de
|
||||
@ -205,7 +97,7 @@ Sun Jan 29 01:48:27 UTC 2012 - jengelh@medozas.de
|
||||
-------------------------------------------------------------------
|
||||
Thu Jun 22 18:18:46 CEST 2006 - ro@suse.de
|
||||
|
||||
- remove selfprovides
|
||||
- remove selfprovides
|
||||
|
||||
-------------------------------------------------------------------
|
||||
Mon Mar 27 02:23:29 CEST 2006 - garloff@suse.de
|
||||
@ -234,15 +126,15 @@ Wed Dec 21 13:33:20 CET 2005 - garloff@suse.de
|
||||
Wed Dec 21 02:17:35 CET 2005 - garloff@suse.de
|
||||
|
||||
- Update to SuperLU-3.0: [#133821]
|
||||
* Added "options" input argument and "stat" output argument
|
||||
* Added "options" input argument and "stat" output argument
|
||||
for the driver routines
|
||||
* More Examples
|
||||
* Added a "symmetric mode" for (nearly) symmetric matrices
|
||||
* Better Fortran interface.
|
||||
* fixed a bug in the complex drivers sgssvx/zgssvx when the
|
||||
* fixed a bug in the complex drivers sgssvx/zgssvx when the
|
||||
input matrix is stored in compressed row format.
|
||||
* prefixed the header files by "slu_".
|
||||
* Fixed a memory leak in get_perm_c() when bnz=0.
|
||||
* prefixed the header files by "slu_".
|
||||
* Fixed a memory leak in get_perm_c() when bnz=0.
|
||||
* Changed "abs" to "fabs" in izmax1.
|
||||
* Upgraded COLAMD to the latest version (2.3).15
|
||||
- Add various declarations and #include statements
|
||||
@ -252,12 +144,12 @@ Wed Dec 21 02:17:35 CET 2005 - garloff@suse.de
|
||||
-------------------------------------------------------------------
|
||||
Fri Nov 25 14:20:00 CET 2005 - yxu@suse.de
|
||||
|
||||
- add missing function prototypes
|
||||
- add missing function prototypes
|
||||
|
||||
-------------------------------------------------------------------
|
||||
Tue Nov 15 13:42:23 CET 2005 - dmueller@suse.de
|
||||
|
||||
- avoid an endless loop during building (#133820)
|
||||
- avoid an endless loop during building (#133820)
|
||||
|
||||
-------------------------------------------------------------------
|
||||
Mon May 9 17:24:12 CEST 2005 - meissner@suse.de
|
||||
@ -267,7 +159,7 @@ Mon May 9 17:24:12 CEST 2005 - meissner@suse.de
|
||||
-------------------------------------------------------------------
|
||||
Mon Dec 20 02:58:44 CET 2004 - garloff@suse.de
|
||||
|
||||
- Pass $(RPM_OPT_FLAGS) -Os -fPIC for files that don't need to be
|
||||
- Pass $(RPM_OPT_FLAGS) -Os -fPIC for files that don't need to be
|
||||
optimized.
|
||||
|
||||
-------------------------------------------------------------------
|
||||
@ -338,7 +230,7 @@ Fri Apr 19 20:17:23 MEST 2002 - garloff@suse.de
|
||||
-------------------------------------------------------------------
|
||||
Wed Apr 10 01:49:54 CEST 2002 - ro@suse.de
|
||||
|
||||
- fix owner for README.SuperLU
|
||||
- fix owner for README.SuperLU
|
||||
|
||||
-------------------------------------------------------------------
|
||||
Mon Aug 7 22:12:27 CEST 2000 - garloff@suse.de
|
||||
@ -359,3 +251,4 @@ Mon Sep 13 17:23:57 CEST 1999 - bs@suse.de
|
||||
Wed Sep 1 00:21:25 CEST 1999 - garloff@suse.de
|
||||
|
||||
- First creation of package.
|
||||
|
||||
|
||||
285
superlu.spec
285
superlu.spec
@ -1,7 +1,8 @@
|
||||
#
|
||||
# spec file for package superlu
|
||||
#
|
||||
# Copyright (c) 2021 SUSE LLC
|
||||
# Copyright (c) 2016 SUSE LINUX GmbH, Nuernberg, Germany.
|
||||
# Copyright (c) 2016 Christoph Grüninger foss@grueninger.de
|
||||
#
|
||||
# All modifications and additions to the file contributed by third parties
|
||||
# remain the property of their copyright owners, unless otherwise agreed
|
||||
@ -12,284 +13,118 @@
|
||||
# license that conforms to the Open Source Definition (Version 1.9)
|
||||
# published by the Open Source Initiative.
|
||||
|
||||
# Please submit bugfixes or comments via https://bugs.opensuse.org/
|
||||
# Please submit bugfixes or comments via http://bugs.opensuse.org/
|
||||
#
|
||||
|
||||
|
||||
%global flavor @BUILD_FLAVOR@%{nil}
|
||||
|
||||
# Base package name
|
||||
%define pname superlu
|
||||
%define ver 5.3.0
|
||||
%define _ver %(echo %{ver} | tr . _)
|
||||
|
||||
%if "%flavor" == ""
|
||||
ExclusiveArch: do_not_build
|
||||
%endif
|
||||
|
||||
%if "%{flavor}" == "serial"
|
||||
%bcond_with hpc
|
||||
%endif
|
||||
|
||||
%if "%{flavor}" == "gnu-hpc"
|
||||
%bcond_without hpc
|
||||
%global compiler_family gnu
|
||||
%undefine c_f_ver
|
||||
%endif
|
||||
|
||||
%if "%{flavor}" == "gnu7-hpc"
|
||||
%bcond_without hpc
|
||||
%global compiler_family gnu
|
||||
%undefine c_f_ver 7
|
||||
%endif
|
||||
|
||||
%if "%{flavor}" == "gnu8-hpc"
|
||||
%bcond_without hpc
|
||||
%global compiler_family gnu
|
||||
%define c_f_ver 8
|
||||
%endif
|
||||
|
||||
%if "%{flavor}" == "gnu9-hpc"
|
||||
%bcond_without hpc
|
||||
%global compiler_family gnu
|
||||
%define c_f_ver 9
|
||||
%endif
|
||||
|
||||
%if "%{flavor}" == "gnu10-hpc"
|
||||
%bcond_without hpc
|
||||
%global compiler_family gnu
|
||||
%define c_f_ver 10
|
||||
%endif
|
||||
|
||||
%bcond_with ringdisabled
|
||||
|
||||
%if %{with hpc} && %{with ringdisabled}
|
||||
ExclusiveArch: do_not_build
|
||||
%endif
|
||||
|
||||
%define package_name %pname
|
||||
%if %{without hpc}
|
||||
%define p_prefix %_prefix
|
||||
%define p_includedir %_includedir
|
||||
%define p_libdir %_libdir
|
||||
%define _sover 5
|
||||
%define libname lib%{name}%{?_sover}
|
||||
%else
|
||||
%{hpc_init -c %compiler_family %{?c_f_ver:-v %{c_f_ver}} %{?ext:-e %{ext}}}
|
||||
%define package_name %{hpc_package_name %_ver}
|
||||
%define p_prefix %hpc_prefix
|
||||
%define p_includedir %hpc_includedir
|
||||
%define p_libdir %hpc_libdir
|
||||
%define libname lib%{name}
|
||||
%endif
|
||||
|
||||
Name: %{package_name}
|
||||
Summary: A general purpose library for the direct solution of linear equations
|
||||
Name: superlu
|
||||
Summary: A general purpose library for the direct solution of sparse systems of linear equations
|
||||
License: BSD-3-Clause
|
||||
Group: Productivity/Scientific/Math
|
||||
Version: %{ver}
|
||||
Group: Development/Libraries/C and C++
|
||||
Version: 5.2.1
|
||||
Release: 0
|
||||
URL: https://portal.nersc.gov/project/sparse/superlu/
|
||||
Source0: %{pname}-%{version}.tar.gz
|
||||
# Tarball above is generated with the script below
|
||||
Source1: get-tarball.sh
|
||||
%define soname lib%{name}5
|
||||
#Source: http://crd-legacy.lbl.gov/~xiaoye/SuperLU/superlu_5.2.1.tar.gz
|
||||
Source: %{name}_%{version}-bsd.tar.gz
|
||||
Source1: superlu_ug.pdf
|
||||
Source2: README.SUSE
|
||||
# PATCH-FIX-OPENSUSE superlu-5.2-remove-mc64ad.patch [bnc#796236]
|
||||
Source3: baselibs.conf
|
||||
# PATCH-FIX-UPSTREAM superlu-4.3-include.patch : avoid implicit declaration warnings
|
||||
Patch1: superlu-4.3-include.patch
|
||||
# PATCH-FIX-UPSTREAM superlu-4.3-dont-opt-away.diff
|
||||
Patch2: superlu-4.3-dont-opt-away.diff
|
||||
# PATCH-FIX-OPENSUSE superlu-5.2-remove-mc64ad.patch [bnc#796236]
|
||||
# The Harwell Subroutine Library (HSL) routine mc64ad.c have been removed
|
||||
# from the original sources for legal reasons. This patch disables the inclusion of
|
||||
# this routine in the library which, however, remains fully functional
|
||||
# this routine in the library which, however, remains fully functionnal
|
||||
Patch3: superlu-5.2-remove-mc64ad.patch
|
||||
Patch4: superlu-examples_Makefile_remove_itersol.patch
|
||||
Patch5: superlu-make.linux.patch
|
||||
Url: http://crd.lbl.gov/~xiaoye/SuperLU/
|
||||
BuildRequires: blas-devel
|
||||
BuildRequires: cmake >= 2.8.12
|
||||
BuildRequires: fdupes
|
||||
BuildRequires: tcsh
|
||||
%if %{without hpc}
|
||||
BuildRequires: blas-devel
|
||||
BuildRequires: gcc-fortran
|
||||
%else
|
||||
Requires: %{compiler_family}%{?c_f_ver}-compilers-hpc
|
||||
BuildRequires: %{compiler_family}%{?c_f_ver}-compilers-hpc-macros-devel
|
||||
BuildRequires: libopenblas%{?hpc_ext}-%{compiler_family}%{?c_f_ver}-hpc-devel
|
||||
BuildRequires: suse-hpc >= 0.3
|
||||
%endif
|
||||
BuildRequires: tcsh
|
||||
BuildRoot: %{_tmppath}/%{name}-%{version}-build
|
||||
|
||||
%description
|
||||
SuperLU is an algorithm that uses group theory to optimize LU
|
||||
decomposition of sparse matrices.
|
||||
|
||||
Documentation can be found in the %{name}-doc package or on
|
||||
http://www.netlib.org.
|
||||
|
||||
%package -n %libname
|
||||
%package -n %soname
|
||||
Summary: SuperLU matrix solver
|
||||
Group: System/Libraries
|
||||
%if %{with hpc}
|
||||
%{requires_eq libopenblas%{?hpc_ext}-%{compiler_family}%{?c_f_ver}-hpc}
|
||||
Requires: lua-lmod >= 7.6.1
|
||||
%hpc_requires
|
||||
%endif
|
||||
|
||||
%description -n %libname
|
||||
%description -n %soname
|
||||
SuperLU is an algorithm that uses group theory to optimize LU
|
||||
decomposition of sparse matrices.
|
||||
|
||||
%package devel
|
||||
Summary: Headers and development library for lib%{name}%{?_sover}
|
||||
Summary: Development files for %{name}
|
||||
Group: Development/Libraries/C and C++
|
||||
Requires: %libname = %version
|
||||
%if %{with hpc}
|
||||
%{requires_eq libopenblas%{?hpc_ext}-%{compiler_family}%{?c_f_ver}-hpc-devel}
|
||||
%hpc_requires_devel
|
||||
%endif
|
||||
Recommends: %name-doc
|
||||
Requires: %soname = %{version}
|
||||
# The standalone superlu RPM has been eliminated, and the relevant
|
||||
# files are now in superlu-devel
|
||||
# The last standalone superlu RPM was was v3.0
|
||||
Provides: superlu = %{version}
|
||||
Obsoletes: superlu <= 3.0
|
||||
|
||||
%description devel
|
||||
SuperLU headers and libraries files needed for development
|
||||
|
||||
%package doc
|
||||
Summary: Documentation for %name
|
||||
Group: Documentation/Other
|
||||
|
||||
%description doc
|
||||
Documentation (HTML/PDF) for SuperLU.
|
||||
SuperLU is an algorithm that uses group theory to optimize LU
|
||||
decomposition of sparse matrices.
|
||||
|
||||
%package examples
|
||||
Summary: Examples for %name
|
||||
Group: Documentation/Other
|
||||
Recommends: %name-devel
|
||||
|
||||
%description examples
|
||||
Example programs for SuperLU.
|
||||
SuperLU is an algorithm that uses group theory to optimize LU
|
||||
decomposition of sparse matrices.
|
||||
|
||||
%if %{with hpc}
|
||||
%{hpc_master_package -l -L}
|
||||
%{hpc_master_package -L devel}
|
||||
%{hpc_master_package doc}
|
||||
%{hpc_master_package -L examples}
|
||||
%endif
|
||||
The %{name}-devel package contains libraries and header files for
|
||||
developing applications that use %{name}.
|
||||
|
||||
%prep
|
||||
%setup -q -n superlu-%{version}
|
||||
%setup -q -n SuperLU_%{version}
|
||||
%patch1 -p1
|
||||
%patch2 -p1
|
||||
%patch3 -p1
|
||||
%patch4 -p1
|
||||
%patch5 -p1
|
||||
cp %SOURCE2 ./
|
||||
# Create baselibs.conf dynamically (non-HPC build only).
|
||||
%if %{without hpc}
|
||||
cat > %{_sourcedir}/baselibs.conf <<EOF
|
||||
lib%{name}%{?_sover}
|
||||
EOF
|
||||
%endif
|
||||
# superlu_ug.pdf in %%doc
|
||||
cp %SOURCE1 %SOURCE2 ./
|
||||
|
||||
%build
|
||||
%{?hpc_setup}
|
||||
%if %{without hpc}
|
||||
# FIXME: Drop the -Denable_tests=OFF flag when MATGEN linking issues are resolved
|
||||
%cmake \
|
||||
%else
|
||||
module load openblas
|
||||
%hpc_cmake \
|
||||
%endif
|
||||
-DCMAKE_BUILD_TYPE=Release -DUSE_XSDK_DEFAULTS='TRUE' -Denable_tests=OFF
|
||||
|
||||
make %{?_smp_mflags}
|
||||
cd ..
|
||||
|
||||
%install
|
||||
%cmake_install
|
||||
|
||||
#fix permissions
|
||||
chmod 644 MATLAB/*
|
||||
|
||||
# remove all build examples
|
||||
cd EXAMPLE
|
||||
make clean
|
||||
rm -rf *itersol* .gitignore
|
||||
rm -rf *itersol*
|
||||
cd ..
|
||||
mv EXAMPLE examples
|
||||
cp MAKE_INC/make.linux examples/make.inc
|
||||
sed -i -e 's&@superlu_home@&%p_prefix&' -e 's&@superlu_lib@&%p_libdir&' examples/make.inc
|
||||
rm -f examples/.gitignore
|
||||
cp FORTRAN/README README.fortran
|
||||
%fdupes -s examples
|
||||
|
||||
%if %{with hpc}
|
||||
%{hpc_write_pkgconfig}
|
||||
%check
|
||||
ln -s examples/ EXAMPLE
|
||||
export LD_LIBRARY_PATH=%{buildroot}%{_libdir}
|
||||
make testing
|
||||
echo -ne "\nTest results\n"
|
||||
for i in stest dtest ctest ztest; do
|
||||
cat TESTING/$i.out
|
||||
done
|
||||
|
||||
# TODO: is there any path to add for Matlab files?
|
||||
%hpc_write_modules_files
|
||||
#%Module1.0#####################################################################
|
||||
%post -n %soname -p /sbin/ldconfig
|
||||
|
||||
proc ModulesHelp { } {
|
||||
%postun -n %soname -p /sbin/ldconfig
|
||||
|
||||
puts stderr " "
|
||||
puts stderr "This module loads the SuperLU library built with the %{compiler_family} compiler"
|
||||
puts stderr "toolchain."
|
||||
puts stderr " "
|
||||
puts stderr "Note that this build of SuperLU leverages the OpenBLAS linear algebra libraries."
|
||||
puts stderr "Consequently, openblas is loaded automatically with this module."
|
||||
|
||||
puts stderr "\nVersion %{version}\n"
|
||||
|
||||
}
|
||||
module-whatis "Name: %{pname} built with %{compiler_family} compiler"
|
||||
module-whatis "Version: %{version}"
|
||||
module-whatis "Category: runtime library"
|
||||
module-whatis "Description: %{SUMMARY}"
|
||||
module-whatis "%{url}"
|
||||
|
||||
set version %{version}
|
||||
|
||||
depends-on openblas
|
||||
|
||||
if {[file isdirectory %{hpc_includedir}]} {
|
||||
prepend-path INCLUDE %{hpc_includedir}
|
||||
}
|
||||
prepend-path LD_LIBRARY_PATH %{hpc_libdir}
|
||||
|
||||
setenv %{hpc_PNAME %pname}_DIR %{hpc_prefix}
|
||||
if {[file isdirectory %{hpc_includedir}]} {
|
||||
setenv %{hpc_PNAME %pname}_INC %{hpc_includedir}
|
||||
%hpc_modulefile_add_pkgconfig_path
|
||||
}
|
||||
setenv %{hpc_PNAME %pname}_LIB %{hpc_libdir}
|
||||
|
||||
EOF
|
||||
%endif
|
||||
|
||||
%if %{without hpc}
|
||||
%post -n %libname -p /sbin/ldconfig
|
||||
%postun -n %libname -p /sbin/ldconfig
|
||||
%else
|
||||
%post -n %libname
|
||||
/sbin/ldconfig -N %hpc_libdir
|
||||
|
||||
%postun -n %libname
|
||||
/sbin/ldconfig -N %hpc_libdir
|
||||
%hpc_module_delete_if_default
|
||||
%endif
|
||||
|
||||
%files -n %libname
|
||||
%files -n %soname
|
||||
%defattr(-,root,root,-)
|
||||
%doc README MATLAB README.SUSE
|
||||
%{?with_hpc:%hpc_dirs}
|
||||
%{?with_hpc:%hpc_modules_files}
|
||||
%{p_libdir}/*.so.*
|
||||
%{_libdir}/*.so.*
|
||||
|
||||
%files devel
|
||||
%doc README.fortran
|
||||
%{?with_hpc:%{hpc_pkgconfig_file}}
|
||||
%{p_includedir}/%{!?with_hpc:*}
|
||||
%{p_libdir}/*.so
|
||||
%dir %{p_libdir}/cmake/
|
||||
%dir %{p_libdir}/cmake/superlu/
|
||||
%{p_libdir}/cmake/superlu/*.cmake
|
||||
%{p_libdir}/pkgconfig/superlu.pc
|
||||
|
||||
%files doc
|
||||
%doc DOC/html DOC/ug.pdf
|
||||
|
||||
%files examples
|
||||
%doc examples
|
||||
%defattr(-,root,root,-)
|
||||
%doc DOC/html examples README.fortran superlu_ug.pdf
|
||||
%{_includedir}/*.h
|
||||
%{_libdir}/*.so
|
||||
|
||||
%changelog
|
||||
|
||||
3
superlu_5.2.1-bsd.tar.gz
Normal file
3
superlu_5.2.1-bsd.tar.gz
Normal file
@ -0,0 +1,3 @@
|
||||
version https://git-lfs.github.com/spec/v1
|
||||
oid sha256:a69513a061432baaac93bfd60a258ad492b894a2f4025276e742d88251b8a82f
|
||||
size 2540521
|
||||
3
superlu_ug.pdf
Normal file
3
superlu_ug.pdf
Normal file
@ -0,0 +1,3 @@
|
||||
version https://git-lfs.github.com/spec/v1
|
||||
oid sha256:f66438fe62cbc455855813b914095a11fe7b96a700926b59bce8a1d8a4dbcdba
|
||||
size 687318
|
||||
Loading…
x
Reference in New Issue
Block a user