This commit is contained in:
Todd R
Git OBS Bridge
parent
84d0eda25e
commit
f4d2dd3913
@ -1,10 +1,8 @@
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This version of SuperLU is slightly different form the original SuperLU
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This version of SuperLU is slightly different form the original SuperLU
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available on http://crd.lbl.gov/~xiaoye/SuperLU/. For legal reasons the
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available on http://crd.lbl.gov/~xiaoye/SuperLU/. For legal reasons the
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routine mc64ad from the Harwell Subroutine Library cannot be redistributed
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routine mc64ad from the Harwell Subroutine Library cannot be redistributed
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by openSUSE and have been removed form the sources.
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by openSUSE and have been removed form the sources. Only SRC/mc64ad.c was
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removed from the tarball.
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mc64ad.c sgsisx.c sldperm.c dgsisx.c dldperm.c cgsisx.c cldperm.c zgsisx.c zldperm.c
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were removed from the tarball.
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However the SuperLU library provided by openSUSE is fully functionnal
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However the SuperLU library provided by openSUSE is fully functionnal
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except that the mc64ad routine is not used.
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except that the mc64ad routine is not used.
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@ -1,4 +0,0 @@
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<multibuild>
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<package>gnu-hpc</package>
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<package>serial</package>
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</multibuild>
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1
baselibs.conf
Normal file
1
baselibs.conf
Normal file
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libsuperlu5
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@ -1,29 +0,0 @@
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#!/bin/bash
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set -e
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VERSION=5.3.0
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FILES="mc64ad.c sgsisx.c sldperm.c dgsisx.c dldperm.c cgsisx.c cldperm.c zgsisx.c zldperm.c"
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URL="https://github.com/xiaoyeli/superlu/archive/v$VERSION/superlu-$VERSION.tar.gz"
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TAR="superlu-$VERSION.tar.gz"
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WORKDIR="$(mktemp -d superlu.XXXX)"
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TODIR="$(pwd)"
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cd "$WORKDIR"
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wget $URL
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tar xfz superlu-$VERSION.tar.gz
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for file in $FILES; do
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rm superlu-$VERSION/SRC/$file
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done
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if [ -e "$TODIR/$TAR" ]; then
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echo "$TAR already exists."
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else
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tar cfz "$TODIR/$TAR" superlu-$VERSION
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fi
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cd "$TODIR"
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rm -r "$WORKDIR"
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20
superlu-4.3-dont-opt-away.diff
Normal file
20
superlu-4.3-dont-opt-away.diff
Normal file
@ -0,0 +1,20 @@
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diff -aruN SuperLU_4.3.orig/INSTALL/timertst.c SuperLU_4.3/INSTALL/timertst.c
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--- SuperLU_4.3.orig/INSTALL/timertst.c 2011-10-27 21:49:47.000000000 +0200
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+++ SuperLU_4.3/INSTALL/timertst.c 2012-12-20 21:55:13.954437737 +0100
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@@ -6,6 +6,8 @@
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return;
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}
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+volatile double _dummy;
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+
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int main()
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{
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/* Parameters */
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@@ -32,6 +34,7 @@
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for (j = 0; j < iters; ++j) {
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for (i = 0; i < NMAX; ++i) y[i] += alpha * x[i];
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alpha = -alpha;
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+ _dummy = y[j%NMAX];
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}
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t2 = SuperLU_timer_();
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tnotim = t2 - t1;
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22
superlu-4.3-include.patch
Normal file
22
superlu-4.3-include.patch
Normal file
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diff -aruN SuperLU_4.3.orig/TESTING/ddrive.c SuperLU_4.3/TESTING/ddrive.c
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--- SuperLU_4.3.orig/TESTING/ddrive.c 2011-10-27 21:49:47.000000000 +0200
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+++ SuperLU_4.3/TESTING/ddrive.c 2012-12-20 22:14:43.026465899 +0100
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@@ -11,6 +11,7 @@
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* Purpose: MAIN test program
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*/
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#include <string.h>
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+#include <unistd.h>
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#include "slu_ddefs.h"
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#define NTESTS 5 /* Number of test types */
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diff -aruN SuperLU_4.3.orig/TESTING/sdrive.c SuperLU_4.3/TESTING/sdrive.c
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--- SuperLU_4.3.orig/TESTING/sdrive.c 2011-10-27 21:49:47.000000000 +0200
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+++ SuperLU_4.3/TESTING/sdrive.c 2012-12-20 22:14:43.030465752 +0100
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@@ -11,6 +11,7 @@
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* Purpose: MAIN test program
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*/
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#include <string.h>
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+#include <unistd.h>
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#include "slu_sdefs.h"
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#define NTESTS 5 /* Number of test types */
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@ -1,15 +1,14 @@
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diff -Nrua a/SRC/CMakeLists.txt b/SRC/CMakeLists.txt
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--- a/SRC/CMakeLists.txt 2016-05-29 13:57:44.683251096 +0200
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--- a/SRC/CMakeLists.txt
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+++ b/SRC/CMakeLists.txt 2016-05-29 13:57:31.570987497 +0200
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+++ b/SRC/CMakeLists.txt
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@@ -22,7 +22,6 @@
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@@ -21,7 +21,6 @@
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ilu_relax_snode.c
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ilu_relax_snode.c
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ilu_heap_relax_snode.c
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ilu_heap_relax_snode.c
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mark_relax.c
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mark_relax.c
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- mc64ad.c
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- mc64ad.c
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qselect.c
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qselect.c
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input_error.c
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input_error.c
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dmach.c
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)
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@@ -65,9 +64,7 @@
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@@ -63,9 +62,7 @@
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smemory.c
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smemory.c
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sutil.c
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sutil.c
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smyblas2.c
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smyblas2.c
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@ -19,7 +18,7 @@ diff -Nrua a/SRC/CMakeLists.txt b/SRC/CMakeLists.txt
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ilu_sdrop_row.c
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ilu_sdrop_row.c
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ilu_ssnode_dfs.c
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ilu_ssnode_dfs.c
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ilu_scolumn_dfs.c
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ilu_scolumn_dfs.c
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@@ -115,9 +112,7 @@
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@@ -112,9 +109,7 @@
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dmemory.c
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dmemory.c
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dutil.c
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dutil.c
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dmyblas2.c
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dmyblas2.c
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@ -29,7 +28,7 @@ diff -Nrua a/SRC/CMakeLists.txt b/SRC/CMakeLists.txt
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ilu_ddrop_row.c
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ilu_ddrop_row.c
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ilu_dsnode_dfs.c
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ilu_dsnode_dfs.c
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ilu_dcolumn_dfs.c
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ilu_dcolumn_dfs.c
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@@ -168,9 +163,7 @@
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@@ -163,9 +158,7 @@
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cmemory.c
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cmemory.c
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cutil.c
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cutil.c
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cmyblas2.c
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cmyblas2.c
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@ -39,7 +38,7 @@ diff -Nrua a/SRC/CMakeLists.txt b/SRC/CMakeLists.txt
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ilu_cdrop_row.c
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ilu_cdrop_row.c
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ilu_csnode_dfs.c
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ilu_csnode_dfs.c
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ilu_ccolumn_dfs.c
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ilu_ccolumn_dfs.c
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@@ -219,9 +212,7 @@
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@@ -213,9 +206,7 @@
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zmemory.c
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zmemory.c
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zutil.c
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zutil.c
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zmyblas2.c
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zmyblas2.c
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@ -1,3 +0,0 @@
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version https://git-lfs.github.com/spec/v1
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oid sha256:c347397f791eb8cb18b557dfe8ed83eaed5638a59c7335808b3949673b35c0a3
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size 2468947
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@ -1,113 +0,0 @@
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diff -Nrua a/EXAMPLE/Makefile b/EXAMPLE/Makefile
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--- a/EXAMPLE/Makefile
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+++ b/EXAMPLE/Makefile
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@@ -39,8 +39,6 @@
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SLINXEXM1 = slinsolx1.o
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SLINXEXM2 = slinsolx2.o
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SLINXEXM3 = slinsolx3.o
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-SITSOL = sitersol.o sfgmr.o
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-SITSOL1 = sitersol1.o sfgmr.o
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DLINEXM = dlinsol.o
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DLINEXM1 = dlinsol1.o
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@@ -49,8 +47,6 @@
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DLINXEXM2 = dlinsolx2.o
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DLINXEXM3 = dlinsolx3.o
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SUPERLUEXM = superlu.o sp_ienv.o
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-DITSOL = ditersol.o dfgmr.o
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-DITSOL1 = ditersol1.o dfgmr.o
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CLINEXM = clinsol.o
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CLINEXM1 = clinsol1.o
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@@ -58,8 +54,6 @@
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CLINXEXM1 = clinsolx1.o
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CLINXEXM2 = clinsolx2.o
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CLINXEXM3 = clinsolx3.o
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-CITSOL = citersol.o cfgmr.o
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-CITSOL1 = citersol1.o cfgmr.o
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ZLINEXM = zlinsol.o
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ZLINEXM1 = zlinsol1.o
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@@ -67,20 +61,17 @@
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ZLINXEXM1 = zlinsolx1.o
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ZLINXEXM2 = zlinsolx2.o
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ZLINXEXM3 = zlinsolx3.o
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-ZITSOL = zitersol.o zfgmr.o
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-ZITSOL1 = zitersol1.o zfgmr.o
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all: single double complex complex16
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-single: slinsol slinsol1 slinsolx slinsolx1 slinsolx2 slinsolx3 \
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- sitersol sitersol1
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+single: slinsol slinsol1 slinsolx slinsolx1 slinsolx2 slinsolx3
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+
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double: dlinsol dlinsol1 dlinsolx dlinsolx1 dlinsolx2 dlinsolx3 \
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- superlu ditersol ditersol1
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-complex: clinsol clinsol1 clinsolx clinsolx1 clinsolx2 clinsolx3 \
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- citersol citersol1
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-complex16: zlinsol zlinsol1 zlinsolx zlinsolx1 zlinsolx2 zlinsolx3 \
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- zitersol zitersol1
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+ superlu
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+complex: clinsol clinsol1 clinsolx clinsolx1 clinsolx2 clinsolx3
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+
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+complex16: zlinsol zlinsol1 zlinsolx zlinsolx1 zlinsolx2 zlinsolx3
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slinsol: $(SLINEXM) $(SUPERLULIB)
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$(LOADER) $(LOADOPTS) $(SLINEXM) $(LIBS) -lm -o $@
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@@ -100,11 +91,6 @@
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slinsolx3: $(SLINXEXM3) $(SUPERLULIB)
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$(LOADER) $(LOADOPTS) $(SLINXEXM3) $(LIBS) -lm -o $@
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-sitersol: $(SITSOL) $(SUPERLULIB)
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- $(LOADER) $(LOADOPTS) $(SITSOL) $(LIBS) -lm -o $@
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-
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-sitersol1: $(SITSOL1) $(SUPERLULIB)
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- $(LOADER) $(LOADOPTS) $(SITSOL1) $(LIBS) -lm -o $@
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dlinsol: $(DLINEXM) $(SUPERLULIB)
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$(LOADER) $(LOADOPTS) $(DLINEXM) $(LIBS) -lm -o $@
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@@ -127,12 +113,6 @@
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superlu: $(SUPERLUEXM) $(SUPERLULIB)
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$(LOADER) $(LOADOPTS) $(SUPERLUEXM) $(LIBS) -lm -o $@
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-ditersol: $(DITSOL) $(SUPERLULIB)
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- $(LOADER) $(LOADOPTS) $(DITSOL) $(LIBS) -lm -o $@
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-
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-ditersol1: $(DITSOL1) $(SUPERLULIB)
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- $(LOADER) $(LOADOPTS) $(DITSOL1) $(LIBS) -lm -o $@
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-
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clinsol: $(CLINEXM) $(SUPERLULIB)
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$(LOADER) $(LOADOPTS) $(CLINEXM) $(LIBS) -lm -o $@
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@@ -151,12 +131,6 @@
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clinsolx3: $(CLINXEXM3) $(SUPERLULIB)
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$(LOADER) $(LOADOPTS) $(CLINXEXM3) $(LIBS) -lm -o $@
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-citersol: $(CITSOL) $(SUPERLULIB)
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- $(LOADER) $(LOADOPTS) $(CITSOL) $(LIBS) -lm -o $@
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-
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-citersol1: $(CITSOL1) $(SUPERLULIB)
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- $(LOADER) $(LOADOPTS) $(CITSOL1) $(LIBS) -lm -o $@
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-
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zlinsol: $(ZLINEXM) $(SUPERLULIB)
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$(LOADER) $(LOADOPTS) $(ZLINEXM) $(LIBS) -lm -o $@
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@@ -175,11 +149,6 @@
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zlinsolx3: $(ZLINXEXM3) $(SUPERLULIB)
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$(LOADER) $(LOADOPTS) $(ZLINXEXM3) $(LIBS) -lm -o $@
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-zitersol: $(ZITSOL) $(SUPERLULIB)
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- $(LOADER) $(LOADOPTS) $(ZITSOL) $(LIBS) -lm -o $@
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-
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-zitersol1: $(ZITSOL1) $(SUPERLULIB)
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- $(LOADER) $(LOADOPTS) $(ZITSOL1) $(LIBS) -lm -o $@
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.c.o:
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$(CC) $(CFLAGS) $(CDEFS) $(INCLUDEDIR) -c $< $(VERBOSE)
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@@ -189,7 +158,7 @@
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clean:
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rm -f *.o *linsol *linsol1 *linsolx *linsolx1 *linsolx2 *linsolx3 \
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- superlu *itersol *itersol1
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+ superlu
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@ -1,14 +0,0 @@
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diff -Nrua a/MAKE_INC/make.linux b/MAKE_INC/make.linux
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--- a/MAKE_INC/make.linux
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+++ b/MAKE_INC/make.linux
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@@ -21,8 +21,8 @@
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#
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# The name of the libraries to be created/linked to
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#
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-SuperLUroot = $(HOME)/Dropbox/Codes/SuperLU/SuperLU
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-SUPERLULIB = $(SuperLUroot)/lib/libsuperlu_5.1.a
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+SuperLUroot = @superlu_home@
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+SUPERLULIB = @superlu_lib@
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#BLASLIB = $(SuperLUroot)/lib/libblas.a
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109
superlu.changes
109
superlu.changes
@ -1,111 +1,3 @@
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-------------------------------------------------------------------
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Thu Sep 30 19:47:48 UTC 2021 - Antoine Ginies <aginies@suse.com>
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|
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- update to version 5.3.0 (JSC#SLE-22138)
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|
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-------------------------------------------------------------------
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Thu Jan 28 17:45:16 UTC 2021 - Egbert Eich <eich@suse.com>
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- Change 'Requires:' to other HPC packages to %requires_eq to depend
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on the exact version. This should take care of HPC packages ignoring
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proper ABI versioning.
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-------------------------------------------------------------------
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Mon Nov 16 14:41:49 UTC 2020 - Ana Guerrero Lopez <aguerrero@suse.com>
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- Fix package name, re-add lines removed by mistake.
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This fix duplicate binary names. (boo#1178840)
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-------------------------------------------------------------------
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Mon Oct 26 14:11:13 UTC 2020 - Ana Guerrero Lopez <aguerrero@suse.com>
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- New version 5.2.2 (boo#1178112)
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- bugfixes, documentation and examples update.
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- Update URL and Source0 and Source1, use get_tarball.sh to remove
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non distributable files.
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- Install superlu_ug.pdf provided by the tarball.
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- Remove patch, merged upstream
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* superlu-4.3-include.patch
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* superlu-4.3-dont-opt-away.diff
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* superlu-5.2-make.patch
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- Refresh patch:
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* superlu-examples_Makefile_remove_itersol.patch
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* superlu-make.linux.patch
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-------------------------------------------------------------------
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Fri Sep 11 06:13:46 UTC 2020 - Egbert Eich <eich@suse.com>
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|
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- Add build support for gcc10 to HPC build (bsc#1174439).
|
|
||||||
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-------------------------------------------------------------------
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Wed Feb 26 12:30:51 UTC 2020 - Egbert Eich <eich@suse.com>
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|
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- Add support for gcc8/9 building (jsc#SLE-8604).
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|
||||||
-------------------------------------------------------------------
|
|
||||||
Thu Feb 14 09:16:02 UTC 2019 - Jan Engelhardt <jengelh@inai.de>
|
|
||||||
|
|
||||||
- Fix the package group fix.
|
|
||||||
|
|
||||||
-------------------------------------------------------------------
|
|
||||||
Sun Feb 10 23:11:37 UTC 2019 - Egbert Eich <eich@suse.com>
|
|
||||||
|
|
||||||
- Fix dependencies.
|
|
||||||
- Fix %%post and %%postun scripts for HPC.
|
|
||||||
- Fix HPC modulefile.
|
|
||||||
- Fix package groups.
|
|
||||||
- Generate and add pkgconfig files.
|
|
||||||
|
|
||||||
-------------------------------------------------------------------
|
|
||||||
Fri Feb 8 10:50:43 UTC 2019 - eich@suse.com
|
|
||||||
|
|
||||||
- Set default module version correctly when installing
|
|
||||||
master package, unset when deinstalling the default library
|
|
||||||
package.
|
|
||||||
- make example make.inc work with non-HPC builds as well.
|
|
||||||
|
|
||||||
-------------------------------------------------------------------
|
|
||||||
Fri Feb 8 09:40:33 UTC 2019 - Antoine Ginies <aginies@suse.com>
|
|
||||||
|
|
||||||
- Add superlu-examples_Makefile_remove_itersol.patch
|
|
||||||
superlu-make.linux.patch:
|
|
||||||
get a buildable examples test suite (bsc#1124765)
|
|
||||||
fixing Makefile
|
|
||||||
adding missing make.inc
|
|
||||||
|
|
||||||
-------------------------------------------------------------------
|
|
||||||
Tue Jan 22 11:58:01 UTC 2019 - eich@suse.com
|
|
||||||
|
|
||||||
- Disable HPC builds for ring testing on Factory submissions.
|
|
||||||
|
|
||||||
-------------------------------------------------------------------
|
|
||||||
Mon Jan 21 15:09:13 UTC 2019 - eich@suse.com
|
|
||||||
|
|
||||||
- Fix a word in a comment.
|
|
||||||
- Remove some colloquialism from a package description.
|
|
||||||
|
|
||||||
-------------------------------------------------------------------
|
|
||||||
Fri Jan 18 14:46:44 UTC 2019 - eich@suse.com
|
|
||||||
|
|
||||||
- Reenable ldconfig in %post and %postun for HPC but don't let it
|
|
||||||
update the cache: this would be pointless for libraries in
|
|
||||||
non-standard locations.
|
|
||||||
|
|
||||||
-------------------------------------------------------------------
|
|
||||||
Thu Jan 10 09:31:45 UTC 2019 - eich@suse.com
|
|
||||||
|
|
||||||
- Moved HPC module from devel to library package.
|
|
||||||
- Modified summary for devel package.
|
|
||||||
|
|
||||||
-------------------------------------------------------------------
|
|
||||||
Fri Oct 26 19:55:59 UTC 2018 - eich@suse.com
|
|
||||||
|
|
||||||
- Add environment module support for HPC.
|
|
||||||
* create baselib.conf on the fly.
|
|
||||||
- Add superlu-5.2-make.patch:
|
|
||||||
add compiler and build flags in make.inc.
|
|
||||||
- Separate off documentation and examples to separate packages.
|
|
||||||
|
|
||||||
-------------------------------------------------------------------
|
-------------------------------------------------------------------
|
||||||
Tue Jun 14 12:56:22 UTC 2016 - badshah400@gmail.com
|
Tue Jun 14 12:56:22 UTC 2016 - badshah400@gmail.com
|
||||||
|
|
||||||
@ -359,3 +251,4 @@ Mon Sep 13 17:23:57 CEST 1999 - bs@suse.de
|
|||||||
Wed Sep 1 00:21:25 CEST 1999 - garloff@suse.de
|
Wed Sep 1 00:21:25 CEST 1999 - garloff@suse.de
|
||||||
|
|
||||||
- First creation of package.
|
- First creation of package.
|
||||||
|
|
||||||
|
|||||||
283
superlu.spec
283
superlu.spec
@ -1,7 +1,8 @@
|
|||||||
#
|
#
|
||||||
# spec file for package superlu
|
# spec file for package superlu
|
||||||
#
|
#
|
||||||
# Copyright (c) 2021 SUSE LLC
|
# Copyright (c) 2016 SUSE LINUX GmbH, Nuernberg, Germany.
|
||||||
|
# Copyright (c) 2016 Christoph Grüninger foss@grueninger.de
|
||||||
#
|
#
|
||||||
# All modifications and additions to the file contributed by third parties
|
# All modifications and additions to the file contributed by third parties
|
||||||
# remain the property of their copyright owners, unless otherwise agreed
|
# remain the property of their copyright owners, unless otherwise agreed
|
||||||
@ -12,284 +13,118 @@
|
|||||||
# license that conforms to the Open Source Definition (Version 1.9)
|
# license that conforms to the Open Source Definition (Version 1.9)
|
||||||
# published by the Open Source Initiative.
|
# published by the Open Source Initiative.
|
||||||
|
|
||||||
# Please submit bugfixes or comments via https://bugs.opensuse.org/
|
# Please submit bugfixes or comments via http://bugs.opensuse.org/
|
||||||
#
|
#
|
||||||
|
|
||||||
|
|
||||||
%global flavor @BUILD_FLAVOR@%{nil}
|
Name: superlu
|
||||||
|
Summary: A general purpose library for the direct solution of sparse systems of linear equations
|
||||||
# Base package name
|
|
||||||
%define pname superlu
|
|
||||||
%define ver 5.3.0
|
|
||||||
%define _ver %(echo %{ver} | tr . _)
|
|
||||||
|
|
||||||
%if "%flavor" == ""
|
|
||||||
ExclusiveArch: do_not_build
|
|
||||||
%endif
|
|
||||||
|
|
||||||
%if "%{flavor}" == "serial"
|
|
||||||
%bcond_with hpc
|
|
||||||
%endif
|
|
||||||
|
|
||||||
%if "%{flavor}" == "gnu-hpc"
|
|
||||||
%bcond_without hpc
|
|
||||||
%global compiler_family gnu
|
|
||||||
%undefine c_f_ver
|
|
||||||
%endif
|
|
||||||
|
|
||||||
%if "%{flavor}" == "gnu7-hpc"
|
|
||||||
%bcond_without hpc
|
|
||||||
%global compiler_family gnu
|
|
||||||
%undefine c_f_ver 7
|
|
||||||
%endif
|
|
||||||
|
|
||||||
%if "%{flavor}" == "gnu8-hpc"
|
|
||||||
%bcond_without hpc
|
|
||||||
%global compiler_family gnu
|
|
||||||
%define c_f_ver 8
|
|
||||||
%endif
|
|
||||||
|
|
||||||
%if "%{flavor}" == "gnu9-hpc"
|
|
||||||
%bcond_without hpc
|
|
||||||
%global compiler_family gnu
|
|
||||||
%define c_f_ver 9
|
|
||||||
%endif
|
|
||||||
|
|
||||||
%if "%{flavor}" == "gnu10-hpc"
|
|
||||||
%bcond_without hpc
|
|
||||||
%global compiler_family gnu
|
|
||||||
%define c_f_ver 10
|
|
||||||
%endif
|
|
||||||
|
|
||||||
%bcond_with ringdisabled
|
|
||||||
|
|
||||||
%if %{with hpc} && %{with ringdisabled}
|
|
||||||
ExclusiveArch: do_not_build
|
|
||||||
%endif
|
|
||||||
|
|
||||||
%define package_name %pname
|
|
||||||
%if %{without hpc}
|
|
||||||
%define p_prefix %_prefix
|
|
||||||
%define p_includedir %_includedir
|
|
||||||
%define p_libdir %_libdir
|
|
||||||
%define _sover 5
|
|
||||||
%define libname lib%{name}%{?_sover}
|
|
||||||
%else
|
|
||||||
%{hpc_init -c %compiler_family %{?c_f_ver:-v %{c_f_ver}} %{?ext:-e %{ext}}}
|
|
||||||
%define package_name %{hpc_package_name %_ver}
|
|
||||||
%define p_prefix %hpc_prefix
|
|
||||||
%define p_includedir %hpc_includedir
|
|
||||||
%define p_libdir %hpc_libdir
|
|
||||||
%define libname lib%{name}
|
|
||||||
%endif
|
|
||||||
|
|
||||||
Name: %{package_name}
|
|
||||||
Summary: A general purpose library for the direct solution of linear equations
|
|
||||||
License: BSD-3-Clause
|
License: BSD-3-Clause
|
||||||
Group: Productivity/Scientific/Math
|
Group: Development/Libraries/C and C++
|
||||||
Version: %{ver}
|
Version: 5.2.1
|
||||||
Release: 0
|
Release: 0
|
||||||
URL: https://portal.nersc.gov/project/sparse/superlu/
|
%define soname lib%{name}5
|
||||||
Source0: %{pname}-%{version}.tar.gz
|
#Source: http://crd-legacy.lbl.gov/~xiaoye/SuperLU/superlu_5.2.1.tar.gz
|
||||||
# Tarball above is generated with the script below
|
Source: %{name}_%{version}-bsd.tar.gz
|
||||||
Source1: get-tarball.sh
|
Source1: superlu_ug.pdf
|
||||||
Source2: README.SUSE
|
Source2: README.SUSE
|
||||||
|
Source3: baselibs.conf
|
||||||
|
# PATCH-FIX-UPSTREAM superlu-4.3-include.patch : avoid implicit declaration warnings
|
||||||
|
Patch1: superlu-4.3-include.patch
|
||||||
|
# PATCH-FIX-UPSTREAM superlu-4.3-dont-opt-away.diff
|
||||||
|
Patch2: superlu-4.3-dont-opt-away.diff
|
||||||
# PATCH-FIX-OPENSUSE superlu-5.2-remove-mc64ad.patch [bnc#796236]
|
# PATCH-FIX-OPENSUSE superlu-5.2-remove-mc64ad.patch [bnc#796236]
|
||||||
# The Harwell Subroutine Library (HSL) routine mc64ad.c have been removed
|
# The Harwell Subroutine Library (HSL) routine mc64ad.c have been removed
|
||||||
# from the original sources for legal reasons. This patch disables the inclusion of
|
# from the original sources for legal reasons. This patch disables the inclusion of
|
||||||
# this routine in the library which, however, remains fully functional
|
# this routine in the library which, however, remains fully functionnal
|
||||||
Patch3: superlu-5.2-remove-mc64ad.patch
|
Patch3: superlu-5.2-remove-mc64ad.patch
|
||||||
Patch4: superlu-examples_Makefile_remove_itersol.patch
|
Url: http://crd.lbl.gov/~xiaoye/SuperLU/
|
||||||
Patch5: superlu-make.linux.patch
|
BuildRequires: blas-devel
|
||||||
BuildRequires: cmake >= 2.8.12
|
BuildRequires: cmake >= 2.8.12
|
||||||
BuildRequires: fdupes
|
BuildRequires: fdupes
|
||||||
BuildRequires: tcsh
|
|
||||||
%if %{without hpc}
|
|
||||||
BuildRequires: blas-devel
|
|
||||||
BuildRequires: gcc-fortran
|
BuildRequires: gcc-fortran
|
||||||
%else
|
BuildRequires: tcsh
|
||||||
Requires: %{compiler_family}%{?c_f_ver}-compilers-hpc
|
BuildRoot: %{_tmppath}/%{name}-%{version}-build
|
||||||
BuildRequires: %{compiler_family}%{?c_f_ver}-compilers-hpc-macros-devel
|
|
||||||
BuildRequires: libopenblas%{?hpc_ext}-%{compiler_family}%{?c_f_ver}-hpc-devel
|
|
||||||
BuildRequires: suse-hpc >= 0.3
|
|
||||||
%endif
|
|
||||||
|
|
||||||
%description
|
%description
|
||||||
SuperLU is an algorithm that uses group theory to optimize LU
|
SuperLU is an algorithm that uses group theory to optimize LU
|
||||||
decomposition of sparse matrices.
|
decomposition of sparse matrices.
|
||||||
|
|
||||||
Documentation can be found in the %{name}-doc package or on
|
%package -n %soname
|
||||||
http://www.netlib.org.
|
|
||||||
|
|
||||||
%package -n %libname
|
|
||||||
Summary: SuperLU matrix solver
|
Summary: SuperLU matrix solver
|
||||||
Group: System/Libraries
|
Group: System/Libraries
|
||||||
%if %{with hpc}
|
|
||||||
%{requires_eq libopenblas%{?hpc_ext}-%{compiler_family}%{?c_f_ver}-hpc}
|
|
||||||
Requires: lua-lmod >= 7.6.1
|
|
||||||
%hpc_requires
|
|
||||||
%endif
|
|
||||||
|
|
||||||
%description -n %libname
|
%description -n %soname
|
||||||
SuperLU is an algorithm that uses group theory to optimize LU
|
SuperLU is an algorithm that uses group theory to optimize LU
|
||||||
decomposition of sparse matrices.
|
decomposition of sparse matrices.
|
||||||
|
|
||||||
%package devel
|
%package devel
|
||||||
Summary: Headers and development library for lib%{name}%{?_sover}
|
Summary: Development files for %{name}
|
||||||
Group: Development/Libraries/C and C++
|
Group: Development/Libraries/C and C++
|
||||||
Requires: %libname = %version
|
Requires: %soname = %{version}
|
||||||
%if %{with hpc}
|
# The standalone superlu RPM has been eliminated, and the relevant
|
||||||
%{requires_eq libopenblas%{?hpc_ext}-%{compiler_family}%{?c_f_ver}-hpc-devel}
|
# files are now in superlu-devel
|
||||||
%hpc_requires_devel
|
# The last standalone superlu RPM was was v3.0
|
||||||
%endif
|
Provides: superlu = %{version}
|
||||||
Recommends: %name-doc
|
Obsoletes: superlu <= 3.0
|
||||||
|
|
||||||
%description devel
|
%description devel
|
||||||
SuperLU headers and libraries files needed for development
|
The %{name}-devel package contains libraries and header files for
|
||||||
|
developing applications that use %{name}.
|
||||||
%package doc
|
|
||||||
Summary: Documentation for %name
|
|
||||||
Group: Documentation/Other
|
|
||||||
|
|
||||||
%description doc
|
|
||||||
Documentation (HTML/PDF) for SuperLU.
|
|
||||||
SuperLU is an algorithm that uses group theory to optimize LU
|
|
||||||
decomposition of sparse matrices.
|
|
||||||
|
|
||||||
%package examples
|
|
||||||
Summary: Examples for %name
|
|
||||||
Group: Documentation/Other
|
|
||||||
Recommends: %name-devel
|
|
||||||
|
|
||||||
%description examples
|
|
||||||
Example programs for SuperLU.
|
|
||||||
SuperLU is an algorithm that uses group theory to optimize LU
|
|
||||||
decomposition of sparse matrices.
|
|
||||||
|
|
||||||
%if %{with hpc}
|
|
||||||
%{hpc_master_package -l -L}
|
|
||||||
%{hpc_master_package -L devel}
|
|
||||||
%{hpc_master_package doc}
|
|
||||||
%{hpc_master_package -L examples}
|
|
||||||
%endif
|
|
||||||
|
|
||||||
%prep
|
%prep
|
||||||
%setup -q -n superlu-%{version}
|
%setup -q -n SuperLU_%{version}
|
||||||
|
%patch1 -p1
|
||||||
|
%patch2 -p1
|
||||||
%patch3 -p1
|
%patch3 -p1
|
||||||
%patch4 -p1
|
# superlu_ug.pdf in %%doc
|
||||||
%patch5 -p1
|
cp %SOURCE1 %SOURCE2 ./
|
||||||
cp %SOURCE2 ./
|
|
||||||
# Create baselibs.conf dynamically (non-HPC build only).
|
|
||||||
%if %{without hpc}
|
|
||||||
cat > %{_sourcedir}/baselibs.conf <<EOF
|
|
||||||
lib%{name}%{?_sover}
|
|
||||||
EOF
|
|
||||||
%endif
|
|
||||||
|
|
||||||
%build
|
%build
|
||||||
%{?hpc_setup}
|
# FIXME: Drop the -Denable_tests=OFF flag when MATGEN linking issues are resolved
|
||||||
%if %{without hpc}
|
|
||||||
%cmake \
|
%cmake \
|
||||||
%else
|
|
||||||
module load openblas
|
|
||||||
%hpc_cmake \
|
|
||||||
%endif
|
|
||||||
-DCMAKE_BUILD_TYPE=Release -DUSE_XSDK_DEFAULTS='TRUE' -Denable_tests=OFF
|
-DCMAKE_BUILD_TYPE=Release -DUSE_XSDK_DEFAULTS='TRUE' -Denable_tests=OFF
|
||||||
|
|
||||||
make %{?_smp_mflags}
|
make %{?_smp_mflags}
|
||||||
|
cd ..
|
||||||
|
|
||||||
%install
|
%install
|
||||||
%cmake_install
|
%cmake_install
|
||||||
|
|
||||||
#fix permissions
|
#fix permissions
|
||||||
chmod 644 MATLAB/*
|
chmod 644 MATLAB/*
|
||||||
|
|
||||||
# remove all build examples
|
# remove all build examples
|
||||||
cd EXAMPLE
|
cd EXAMPLE
|
||||||
make clean
|
make clean
|
||||||
rm -rf *itersol* .gitignore
|
rm -rf *itersol*
|
||||||
cd ..
|
cd ..
|
||||||
mv EXAMPLE examples
|
mv EXAMPLE examples
|
||||||
cp MAKE_INC/make.linux examples/make.inc
|
|
||||||
sed -i -e 's&@superlu_home@&%p_prefix&' -e 's&@superlu_lib@&%p_libdir&' examples/make.inc
|
|
||||||
rm -f examples/.gitignore
|
|
||||||
cp FORTRAN/README README.fortran
|
cp FORTRAN/README README.fortran
|
||||||
%fdupes -s examples
|
%fdupes -s examples
|
||||||
|
|
||||||
%if %{with hpc}
|
%check
|
||||||
%{hpc_write_pkgconfig}
|
ln -s examples/ EXAMPLE
|
||||||
|
export LD_LIBRARY_PATH=%{buildroot}%{_libdir}
|
||||||
|
make testing
|
||||||
|
echo -ne "\nTest results\n"
|
||||||
|
for i in stest dtest ctest ztest; do
|
||||||
|
cat TESTING/$i.out
|
||||||
|
done
|
||||||
|
|
||||||
# TODO: is there any path to add for Matlab files?
|
%post -n %soname -p /sbin/ldconfig
|
||||||
%hpc_write_modules_files
|
|
||||||
#%Module1.0#####################################################################
|
|
||||||
|
|
||||||
proc ModulesHelp { } {
|
%postun -n %soname -p /sbin/ldconfig
|
||||||
|
|
||||||
puts stderr " "
|
%files -n %soname
|
||||||
puts stderr "This module loads the SuperLU library built with the %{compiler_family} compiler"
|
%defattr(-,root,root,-)
|
||||||
puts stderr "toolchain."
|
|
||||||
puts stderr " "
|
|
||||||
puts stderr "Note that this build of SuperLU leverages the OpenBLAS linear algebra libraries."
|
|
||||||
puts stderr "Consequently, openblas is loaded automatically with this module."
|
|
||||||
|
|
||||||
puts stderr "\nVersion %{version}\n"
|
|
||||||
|
|
||||||
}
|
|
||||||
module-whatis "Name: %{pname} built with %{compiler_family} compiler"
|
|
||||||
module-whatis "Version: %{version}"
|
|
||||||
module-whatis "Category: runtime library"
|
|
||||||
module-whatis "Description: %{SUMMARY}"
|
|
||||||
module-whatis "%{url}"
|
|
||||||
|
|
||||||
set version %{version}
|
|
||||||
|
|
||||||
depends-on openblas
|
|
||||||
|
|
||||||
if {[file isdirectory %{hpc_includedir}]} {
|
|
||||||
prepend-path INCLUDE %{hpc_includedir}
|
|
||||||
}
|
|
||||||
prepend-path LD_LIBRARY_PATH %{hpc_libdir}
|
|
||||||
|
|
||||||
setenv %{hpc_PNAME %pname}_DIR %{hpc_prefix}
|
|
||||||
if {[file isdirectory %{hpc_includedir}]} {
|
|
||||||
setenv %{hpc_PNAME %pname}_INC %{hpc_includedir}
|
|
||||||
%hpc_modulefile_add_pkgconfig_path
|
|
||||||
}
|
|
||||||
setenv %{hpc_PNAME %pname}_LIB %{hpc_libdir}
|
|
||||||
|
|
||||||
EOF
|
|
||||||
%endif
|
|
||||||
|
|
||||||
%if %{without hpc}
|
|
||||||
%post -n %libname -p /sbin/ldconfig
|
|
||||||
%postun -n %libname -p /sbin/ldconfig
|
|
||||||
%else
|
|
||||||
%post -n %libname
|
|
||||||
/sbin/ldconfig -N %hpc_libdir
|
|
||||||
|
|
||||||
%postun -n %libname
|
|
||||||
/sbin/ldconfig -N %hpc_libdir
|
|
||||||
%hpc_module_delete_if_default
|
|
||||||
%endif
|
|
||||||
|
|
||||||
%files -n %libname
|
|
||||||
%doc README MATLAB README.SUSE
|
%doc README MATLAB README.SUSE
|
||||||
%{?with_hpc:%hpc_dirs}
|
%{_libdir}/*.so.*
|
||||||
%{?with_hpc:%hpc_modules_files}
|
|
||||||
%{p_libdir}/*.so.*
|
|
||||||
|
|
||||||
%files devel
|
%files devel
|
||||||
%doc README.fortran
|
%defattr(-,root,root,-)
|
||||||
%{?with_hpc:%{hpc_pkgconfig_file}}
|
%doc DOC/html examples README.fortran superlu_ug.pdf
|
||||||
%{p_includedir}/%{!?with_hpc:*}
|
%{_includedir}/*.h
|
||||||
%{p_libdir}/*.so
|
%{_libdir}/*.so
|
||||||
%dir %{p_libdir}/cmake/
|
|
||||||
%dir %{p_libdir}/cmake/superlu/
|
|
||||||
%{p_libdir}/cmake/superlu/*.cmake
|
|
||||||
%{p_libdir}/pkgconfig/superlu.pc
|
|
||||||
|
|
||||||
%files doc
|
|
||||||
%doc DOC/html DOC/ug.pdf
|
|
||||||
|
|
||||||
%files examples
|
|
||||||
%doc examples
|
|
||||||
|
|
||||||
%changelog
|
%changelog
|
||||||
|
|||||||
3
superlu_5.2.1-bsd.tar.gz
Normal file
3
superlu_5.2.1-bsd.tar.gz
Normal file
@ -0,0 +1,3 @@
|
|||||||
|
version https://git-lfs.github.com/spec/v1
|
||||||
|
oid sha256:a69513a061432baaac93bfd60a258ad492b894a2f4025276e742d88251b8a82f
|
||||||
|
size 2540521
|
||||||
3
superlu_ug.pdf
Normal file
3
superlu_ug.pdf
Normal file
@ -0,0 +1,3 @@
|
|||||||
|
version https://git-lfs.github.com/spec/v1
|
||||||
|
oid sha256:f66438fe62cbc455855813b914095a11fe7b96a700926b59bce8a1d8a4dbcdba
|
||||||
|
size 687318
|
||||||
Loading…
x
Reference in New Issue
Block a user