Accepting request 292498 from home:badshah400:branches:science

Update to verson 6.2.0; build with system packages for > 13.2; rpmlintrc against devel file warnings

OBS-URL: https://build.opensuse.org/request/show/292498
OBS-URL: https://build.opensuse.org/package/show/science/vtk?expand=0&rev=52

VTK-6.1.0.tar.gz

@@ -1,3 +0,0 @@
-version https://git-lfs.github.com/spec/v1
-oid sha256:bd7df10a479606d529a8b71f466c44a2bdd11fd534c62ce0aa44fad91883fa34
-size 27608882

VTK-6.2.0.tar.gz

@@ -0,0 +1,3 @@
+version https://git-lfs.github.com/spec/v1
+oid sha256:efa3ddfba118f3988ead08bdaf9441d33f23a4245d78511a6ce7f267b4f13277
+size 30114472

vtk-Mesa10.3-build-failures.patch

@@ -1,13 +0,0 @@
-Index: VTK-6.1.0/Rendering/OpenGL/vtkXOpenGLRenderWindow.cxx
-===================================================================
---- VTK-6.1.0.orig/Rendering/OpenGL/vtkXOpenGLRenderWindow.cxx
-+++ VTK-6.1.0/Rendering/OpenGL/vtkXOpenGLRenderWindow.cxx
-@@ -27,7 +27,7 @@
- 
- // define GLX_GLXEXT_LEGACY to prevent glx.h to include glxext.h provided by
- // the system
--//#define GLX_GLXEXT_LEGACY
-+#define GLX_GLXEXT_LEGACY
- #include "GL/glx.h"
- 
- #include "vtkgl.h"

vtk-install-missing-modules.patch

@@ -1,16 +0,0 @@
-Index: VTK-6.1.0/CMake/vtkModuleTop.cmake
-===================================================================
---- VTK-6.1.0.orig/CMake/vtkModuleTop.cmake
-+++ VTK-6.1.0/CMake/vtkModuleTop.cmake
-@@ -330,9 +330,11 @@ if (NOT VTK_INSTALL_NO_DEVELOPMENT)
-                 CMake/pythonmodules.h.in
-                 CMake/UseVTK.cmake
-                 CMake/FindTCL.cmake
-+                CMake/TopologicalSort.cmake
-                 CMake/vtkTclTkMacros.cmake
-                 CMake/vtk-forward.c.in
-                 CMake/vtkForwardingExecutable.cmake
-+                CMake/vtkGroups.cmake
-                 CMake/vtkJavaWrapping.cmake
-                 CMake/vtkMakeInstantiator.cmake
-                 CMake/vtkModuleAPI.cmake

vtk-rpmlintrc

@@ -0,0 +1,3 @@
+# FIXME: See if packaging can be tweaked to avoid these warnings later
+# python-vtk needs these devel files to work
+addFilter("python-vtk.* devel-file-in-non-devel-package")

vtk-system.patch

@@ -1,29 +0,0 @@
-Index: VTK6.0.0/CMake/vtkModuleMacros.cmake
-===================================================================
---- VTK6.0.0.orig/CMake/vtkModuleMacros.cmake
-+++ VTK6.0.0/CMake/vtkModuleMacros.cmake
-@@ -613,7 +613,7 @@ macro(vtk_module_third_party _pkg)
-     message(FATAL_ERROR "Cannot specify both LIBRARIES and NO_LIBRARIES")
-   endif()
- 
--  option(VTK_USE_SYSTEM_${_upper} "Use system-installed ${_pkg}" OFF)
-+  option(VTK_USE_SYSTEM_${_upper} "Use system-installed ${_pkg}" ${VTK_USE_SYSTEM_LIBRARIES})
-   mark_as_advanced(VTK_USE_SYSTEM_${_upper})
- 
-   if(VTK_USE_SYSTEM_${_upper})
-Index: VTK6.0.0/CMakeLists.txt
-===================================================================
---- VTK6.0.0.orig/CMakeLists.txt
-+++ VTK6.0.0/CMakeLists.txt
-@@ -132,6 +132,11 @@ if (CMAKE_CROSSCOMPILING AND NOT COMPILE
- endif()
-
- #-----------------------------------------------------------------------------
-+# Do we try to use system libraries by default?
-+OPTION(VTK_USE_SYSTEM_LIBRARIES "Use the system's libraries by default." OFF)
-+MARK_AS_ADVANCED(VTK_USE_SYSTEM_LIBRARIES)
-+
-+#-----------------------------------------------------------------------------
- # The third party macros are still used in one or two third party builds.
- include(vtkThirdParty)
- 

vtk.changes

@@ -1,3 +1,22 @@
+-------------------------------------------------------------------
+Fri Mar 13 19:50:12 UTC 2015 - badshah400@gmail.com
+
+- Update to version 6.2.0:
+  + See http://www.kitware.com/blog/home/post/858 for a list of
+    changes.
+- Drop patches incorporated upstream:
+  + vtk-install-missing-modules.patch
+  + vtk-Mesa10.3-build-failures.patch
+  + vtk-system.patch.
+- Update filelist to incorporate new files installed by upstream.
+- Use system hdf5 and netcdf on all openSUSE versions.
+- Build on openSUSE > 13.2 with system libraries ON (except
+  for libproj4); all required depndencies for this purpose are
+  now in Factory.
+- Add rpmlintrc file to suppress
+  "devel-files-in-non-devel-package" warning; python-vtk needs
+  these devel files for its own functioning.
+
 -------------------------------------------------------------------
 Thu Feb 26 12:30:11 UTC 2015 - dkxls23@gmail.com
 

vtk.spec

@@ -17,9 +17,9 @@
 
 
 Name:           vtk
-Version:        6.1.0
+Version:        6.2.0
 Release:        0
-%define series 6.1
+%define series 6.2
 # This is a variant BSD license, a cross between BSD and ZLIB.
 # For all intents, it has the same rights and restrictions as BSD.
 # http://fedoraproject.org/wiki/Licensing/BSD#VTKBSDVariant
@@ -28,14 +28,10 @@ License:        BSD-3-Clause
 Group:          Productivity/Scientific/Other
 Url:            http://vtk.org/
 Source:         http://www.vtk.org/files/release/%{series}/VTK-%{version}.tar.gz
-# PATCH-FIX-UPSTREAM vtk-system.patch badshah400@gmail.com -- Use system libraries, http://public.kitware.com/Bug/view.php?id=11823
+# FIXME See if packaging can be tweaked to accommodate python-vtk's devel files in a devel package later
-Patch0:         vtk-system.patch
+Source1:        vtk-rpmlintrc
 # PATCH-FIX-UPSTREAM vtk-fix-file-contains-date-time.patch badshah400@gmail.com -- Fix file containing DATE and TIME
 Patch1:         vtk-fix-file-contains-date-time.patch
-# PATCH-FIX-UPSTREAM vtk-install-missing-modules.patch badshah400@gmail.com -- Install some cmake modules missed in upstream packaging (will be required if in future we can get paraview to use system installed vtk)
-Patch2:         vtk-install-missing-modules.patch
-# PATCH-FIX-UPSTREAM vtk-Mesa10.3-build-failures.patch badshah400@gmail.com --  Actually define GLX_GLXEXT_LEGACY to prevent the system glext.h include; fixes buld failures with Mesa >= 10.3; fix taken from upstream git and rebased
-Patch3:         vtk-Mesa10.3-build-failures.patch
 BuildRequires:  Mesa-libGL-devel
 BuildRequires:  R-base-devel
 BuildRequires:  boost-devel
@@ -57,10 +53,12 @@ BuildRequires:  libexpat-devel
 BuildRequires:  libiodbc-devel
 BuildRequires:  libjpeg-devel
 BuildRequires:  libmysqlclient-devel
+BuildRequires:  libnetcdf_c++-devel
 BuildRequires:  libpng-devel
 BuildRequires:  libqt4-devel
 BuildRequires:  libtheora-devel
 BuildRequires:  libtiff-devel
+BuildRequires:  netcdf-devel
 BuildRequires:  openmpi-devel
 BuildRequires:  python-devel
 BuildRequires:  python-qt4-devel
@@ -73,6 +71,10 @@ BuildRequires:  libxml2-devel
 %else
 BuildRequires:  pkgconfig(libxml-2.0)
 %endif
+# jsoncpp available for openSUSE > 13.2
+%if 0%{?suse_version} > 1320
+BuildRequires:  jsoncpp-devel
+%endif
 BuildRoot:      %{_tmppath}/%{name}-%{version}-build
 %define qtdir   %{_lib}/qt4
 
@@ -225,12 +227,7 @@ This package provides a few testing programs for VTK.
 
 %prep
 %setup -q -n VTK-%{version}
-%patch0 -p1
 %patch1 -p1
-%patch2 -p1
-%if 0%{?suse_version} > 1310
-%patch3 -p1
-%endif
 
 # Replace relative path ../../../VTKData with %%{_datadir}/%%{name}data-%%{version}
 # otherwise it will break on symlinks.
@@ -259,7 +256,11 @@ cmake .. \
     -DVTK_INSTALL_QT_DIR:STRING=/%{qtdir}/plugins/designer \
     -DVTK_USE_OGGTHEORA_ENCODER:BOOL=ON \
     -DVTK_USE_RENDERING:BOOL=ON \
+%if 0%{?suse_version} > 1320
+    -DVTK_USE_SYSTEM_LIBRARIES:BOOL=ON \
+%else
     -DVTK_USE_SYSTEM_LIBRARIES:BOOL=OFF \
+%endif
     -DVTK_USE_SYSTEM_LIBPROJ4:BOOL=OFF \
 %if 0%{?suse_version} <= 1230
     -DVTK_USE_SYSTEM_GL2PS:BOOL=OFF \
@@ -279,7 +280,9 @@ cmake .. \
     -DVTK_Group_Tk:BOOL=ON \
     -DVTK_Group_Views:BOOL=ON \
     -DModule_vtkFiltersStatisticsGnuR:BOOL=ON \
-    -DVTK_WRAP_TCL:BOOL=ON
+    -DVTK_WRAP_TCL:BOOL=ON \
+    -DVTK_USE_SYSTEM_HDF5:BOOL=ON \
+    -DVTK_USE_SYSTEM_NETCDF:BOOL=ON
 
 make %{?_smp_mflags} VERBOSE=1
 
@@ -385,7 +388,9 @@ chrpath -d %{buildroot}%{_bindir}/*
 %{_bindir}/%{name}HashSource
 %{_bindir}/%{name}ParseOGLExt
 %{_bindir}/%{name}WrapHierarchy
+%if 0%{?suse_version} <= 1320
 %{_bindir}/%{name}mkg3states
+%endif
 %{_datadir}/doc/%{name}-%{series}/
 %{_libdir}/%{name}/*.so
 %{_libdir}/cmake/%{name}/
@@ -409,6 +414,8 @@ chrpath -d %{buildroot}%{_bindir}/*
 %{_bindir}/%{name}WrapPythonInit
 %{_libdir}/%{name}/*Python*.so.*
 %{python_sitearch}/%{name}/
+%dir %{_libdir}/%{name}/site-packages
+%{_libdir}/%{name}/site-packages/mpi4py/
 %exclude %{_libdir}/%{name}/*QtPython27D.so.*
 
 %files tcl