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Accepting request 872840 from devel:languages:python

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OBS-URL: https://build.opensuse.org/request/show/872840
OBS-URL: https://build.opensuse.org/package/show/openSUSE:Factory/python-joblib?expand=0&rev=18
This commit is contained in:
Dominique Leuenberger
2021-02-16 21:34:42 +00:00
committed by Git OBS Bridge
parent 8bec12edd8 3ffc59f69d
commit c0a049d971
6 changed files with 46 additions and 82 deletions
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39
disable_test_on_big_endian.patch
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@@ -1,39 +0,0 @@
From: Michel Normand <normand@linux.vnet.ibm.com>
Subject: disable test on big endian
Date: Fri, 21 Aug 2020 10:35:13 +0200
disable test on big endian
because still open
https://github.com/joblib/joblib/issues/279
Signed-off-by: Michel Normand <normand@linux.vnet.ibm.com>
---
joblib/test/test_numpy_pickle.py | 7 +++++++
1 file changed, 7 insertions(+)
Index: joblib-0.16.0/joblib/test/test_numpy_pickle.py
===================================================================
--- joblib-0.16.0.orig/joblib/test/test_numpy_pickle.py
+++ joblib-0.16.0/joblib/test/test_numpy_pickle.py
@@ -2,6 +2,7 @@
import copy
import os
+import sys
import random
import re
import io
@@ -426,6 +427,12 @@ def _check_pickle(filename, expected_lis
@with_numpy
def test_joblib_pickle_across_python_versions():
+ # temporarily disable this test on non little-endian machines
+ # because next endianness lines not sufficient.
+ # https://github.com/joblib/joblib/issues/279 still open.
+ if sys.byteorder != 'little':
+ raise SkipTest('Skipping this test on non little-endian machines')
+
# We need to be specific about dtypes in particular endianness
# because the pickles can be generated on one architecture and
# the tests run on another one. See

3
joblib-0.16.0.tar.gz
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@@ -1,3 +0,0 @@
version https://git-lfs.github.com/spec/v1
oid sha256:8f52bf24c64b608bf0b2563e0e47d6fcf516abc8cfafe10cfd98ad66d94f92d6
size 349661

3
joblib-1.0.1.tar.gz Normal file
View File

@@ -0,0 +1,3 @@
version https://git-lfs.github.com/spec/v1
oid sha256:9c17567692206d2f3fb9ecf5e991084254fe631665c450b443761c4186a613f7
size 316131

28
joblib-disable-unrelialble-tests.patch
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@@ -1,28 +0,0 @@
--- joblib-0.16.0/joblib/test/test_memmapping.py.orig 2020-09-08 08:01:19.285304370 +0000
+++ joblib-0.16.0/joblib/test/test_memmapping.py 2020-09-08 08:05:25.318014706 +0000
@@ -512,6 +512,7 @@ def test_memmapping_temp_folder_thread_s
@with_numpy
@with_multiprocessing
def test_multithreaded_parallel_termination_resource_tracker_silent():
+ raise SkipTest('Skipping this test as it fails often in OBS')
# test that concurrent termination attempts of a same executor does not
# emit any spurious error from the resource_tracker. We test various
# situations making 0, 1 or both parallel call sending a task that will
@@ -681,6 +682,8 @@ def test_memmap_returned_as_regular_arra
@with_multiprocessing
@parametrize("backend", ["multiprocessing", param("loky", marks=xfail)])
def test_resource_tracker_silent_when_reference_cycles(backend):
+ if backend == 'multiprocessing':
+ raise SkipTest('Skipping this test as it fails often in OBS')
# There is a variety of reasons that can make joblib with loky backend
# output noisy warnings when a reference cycle is preventing a memmap from
# being garbage collected. Especially, joblib's main process finalizer
@@ -778,6 +781,8 @@ def test_memmapping_pool_for_large_array
@with_multiprocessing
@parametrize("backend", ["multiprocessing", "loky"])
def test_child_raises_parent_exits_cleanly(backend):
+ if backend == 'multiprocessing':
+ raise SkipTest('Skipping this test as it fails often in OBS')
# When a task executed by a child process raises an error, the parent
# process's backend is notified, and calls abort_everything.
# In loky, abort_everything itself calls shutdown(kill_workers=True) which

30
python-joblib.changes
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@@ -1,3 +1,33 @@
-------------------------------------------------------------------
Mon Feb 15 23:26:21 UTC 2021 - Ben Greiner <code@bnavigator.de>
- Update to 1.0.1
* dask: avoid redundant scattering of large arguments to make a
more efficient use of the network resources and avoid crashing
dask with "OSError: [Errno 55] No buffer space available" or
"ConnectionResetError: [Errno 104] connection reset by
peer".
- Changees in 1.0.0
* Make joblib.hash and joblib.Memory caching system compatible
with numpy >= 1.20.0. Also make it explicit in the
documentation that users should now expect to have their joblib.
Memory cache invalidated when either joblib or a third party
library involved in the cached values definition is upgraded.
In particular, users updating joblib to a release that includes
this fix will see their previous cache invalidated if they
contained reference to numpy objects.
* Remove deprecated check_pickle argument in delayed.
- Changes in 0.17.0
* Fix a spurious invalidation of Memory.cache'd functions called
with Parallel under Jupyter or IPython.
* Bump vendored loky to 2.9.0 and cloudpickle to 1.6.0. In
particular this fixes a problem to add compat for Python 3.9.
- Don't require optional NumPy for python36 tests in TW, because
NumPy 1.20 dropped support for Python 3.6 (NEP 29)
- Drop joblib-disable-unrelialble-tests.patch, they are already
used in pytest deselection parameter.
* Do the same for disable_test_on_big_endian.patch.
-------------------------------------------------------------------
Sun Dec 6 21:37:54 UTC 2020 - Benjamin Greiner <code@bnavigator.de>

25
python-joblib.spec
View File

@@ -1,7 +1,7 @@
#
# spec file for package python-joblib
#
# Copyright (c) 2020 SUSE LLC
# Copyright (c) 2021 SUSE LLC
#
# All modifications and additions to the file contributed by third parties
# remain the property of their copyright owners, unless otherwise agreed
@@ -19,27 +19,25 @@
%{?!python_module:%define python_module() python-%{**} python3-%{**}}
%global skip_python2 1
Name: python-joblib
Version: 0.16.0
Version: 1.0.1
Release: 0
Summary: Module for using Python functions as pipeline jobs
License: BSD-3-Clause
Group: Development/Languages/Python
URL: https://github.com/joblib/joblib
Source: https://files.pythonhosted.org/packages/source/j/joblib/joblib-%{version}.tar.gz
Patch1: disable_test_on_big_endian.patch
# PATCH-FIX-OPENSUSE - Disable tests failing often in OBS
Patch2: joblib-disable-unrelialble-tests.patch
BuildRequires: %{python_module lz4}
BuildRequires: %{python_module numpy}
BuildRequires: %{python_module psutil}
BuildRequires: %{python_module pytest}
BuildRequires: %{python_module setuptools}
BuildRequires: %{python_module threadpoolctl}
BuildRequires: fdupes
BuildRequires: python-rpm-macros
Requires: python-lz4
BuildRequires: %{python_module numpy if (%python-base without python36-base)}
Recommends: python-lz4
Recommends: python-numpy
Recommends: python-psutil
Suggests: python-dask-distributed
BuildArch: noarch
%python_subpackages
@@ -58,10 +56,6 @@ Joblib can handle large data and has specific optimizations for `numpy` arrays.
%prep
%setup -q -n joblib-%{version}
%patch1 -p1
%ifarch aarch64 %arm ppc64 %{ix86}
%patch2 -p1
%endif
%build
%python_build
@@ -93,6 +87,9 @@ export LANG=en_US.UTF-8
# test_hashes_are_different_between_c_and_fortran_contiguous_arrays
# test_hashes_stay_the_same_with_numpy_objects
# test_non_contiguous_array_pickling
#
# always fails:
# test_parallel_call_cached_function_defined_in_jupyter
DISABLED_TESTS="test_hash_numpy_noncontiguous or \
test_hashes_are_different_between_c_and_fortran_contiguous_arrays or \
test_hashes_stay_the_same_with_numpy_objects or \
@@ -104,7 +101,11 @@ DISABLED_TESTS="test_hash_numpy_noncontiguous or \
test_hash_numpy_noncontiguous or \
test_hashes_are_different_between_c_and_fortran_contiguous_arrays or \
test_hashes_stay_the_same_with_numpy_objects or \
test_non_contiguous_array_pickling"
test_non_contiguous_array_pickling or \
test_parallel_call_cached_function_defined_in_jupyter"
if [ $(python3 -c 'import sys; print(sys.byteorder)') != "little" ]; then
DISABLED_TESTS+=" or test_joblib_pickle_across_python_versions"
fi
%pytest -k "not ($DISABLED_TESTS)"
%files %{python_files}