Accepting request 505213 from science

1

OBS-URL: https://build.opensuse.org/request/show/505213
OBS-URL: https://build.opensuse.org/package/show/openSUSE:Factory/gsl?expand=0&rev=37

fix_legendre_test.patch

@@ -1,18 +0,0 @@
-Author: Adam Majer <amajer@suse.de>
-Date: Thu May 18 08:55:43 UTC 2017
-Bug: bnc#1030250
-Summary: Failing tests on i586 due to floating point "issues"
-
-Index: gsl-2.3/specfunc/test_legendre.c
-===================================================================
---- gsl-2.3.orig/specfunc/test_legendre.c
-+++ gsl-2.3/specfunc/test_legendre.c
-@@ -1067,7 +1067,7 @@ int test_legendre(void)
-       test_legendre_all(l);
- 
-     test_legendre_all(140);
--    test_legendre_all(1000);
-+    /*test_legendre_all(1000);*/
-     /*test_legendre_all(2700);*/
-   }
- 

gsl-2.3.tar.gz

@@ -1,3 +0,0 @@
-version https://git-lfs.github.com/spec/v1
-oid sha256:562500b789cd599b3a4f88547a7a3280538ab2ff4939504c8b4ac4ca25feadfb
-size 4510731

gsl-2.4.tar.gz

@@ -0,0 +1,3 @@
+version https://git-lfs.github.com/spec/v1
+oid sha256:4d46d07b946e7b31c19bbf33dda6204d7bedc2f5462a1bae1d4013426cd1ce9b
+size 5916715

gsl.changes

@@ -1,3 +1,44 @@
+-------------------------------------------------------------------
+Tue Jun 20 08:26:18 UTC 2017 - adam.majer@suse.de
+
+- rstat_test.patch - Fix rstat test on PPC platform
+- re-enable multi-job support in unit tests (check make target)
+
+-------------------------------------------------------------------
+Mon Jun 19 14:11:18 UTC 2017 - adam.majer@suse.de
+
+- Update to new upstream version 2.4:
+  * add const to declaration of appropriate gsl_rstat routines
+  * added routines for Hermite polynomials, gsl_sf_hermite_*
+  * added routines to compute integrals with fixed-point
+    quadrature, based on IQPACK
+  * added new nonlinear least squares example for fitting
+    a Gaussian to data
+  * deprecated routines:
+     gsl_sf_coupling_6j_INCORRECT
+     gsl_sf_coupling_6j_INCORRECT_e
+  * deprecated routine 'gsl_linalg_hessenberg' (replaced
+    by gsl_linalg_hessenberg_decomp)
+  * removed routines which were deprecated in v2.1:
+     gsl_bspline_deriv_alloc
+     gsl_bspline_deriv_free
+  * changed COD expression to Q R Z^T instead of Q R Z to
+    be consistent with standard texts
+  * added check for nz == 0 in gsl_spmatrix_get
+  * permit zero-dimension blocks, vectors, matrics, subvectors,
+    submatrices, and views of the above
+  * added routine gsl_linalg_COD_lssolve2 for regularized
+    least squares problems
+- obsoletes patches:
+  * ppc_test_tolerence.patch
+  * fix_legendre_test.patch
+- unit tests re-enabled
+
+-------------------------------------------------------------------
+Wed Jun 14 11:54:35 UTC 2017 - adam.majer@suse.de
+
+- Update to test version 2.3.90. 
+
 -------------------------------------------------------------------
 Thu May 18 08:57:35 UTC 2017 - adam.majer@suse.de
 

gsl.spec

@@ -16,10 +16,10 @@
 #
 
 
-%define lname   libgsl19
+%define lname   libgsl23
 %define lcblasname libgslcblas0
 Name:           gsl
-Version:        2.3
+Version:        2.4
 Release:        0
 Summary:        GNU Scientific Library
 License:        GPL-3.0+
@@ -29,12 +29,11 @@ Source0:        https://ftp.gnu.org/pub/gnu/gsl/gsl-%{version}.tar.gz
 Source1:        https://ftp.gnu.org/pub/gnu/gsl/gsl-%{version}.tar.gz.sig
 Source2:        https://savannah.gnu.org/project/memberlist-gpgkeys.php?group=gsl&download=1#/%{name}.keyring
 Patch0:         gsl-1.6-initvars.diff
+Patch1:         rstat_test.patch
 Patch5:         gsl-wrap.diff
 Patch6:         gsl-qawc-test-x86-precision.diff
 Patch7:         gsl-disable-fma.patch
 Patch8:         gsl-fsf_address.patch
-Patch9:         ppc_test_tolerence.patch
-Patch10:        fix_legendre_test.patch
 BuildRequires:  autoconf
 BuildRequires:  automake
 BuildRequires:  blas-devel
@@ -75,9 +74,9 @@ Least-Squares Fitting - Physical Constants - IEEE Floating-Point
 
 %package     -n %{lcblasname}
 Summary:        A standard C language APIs for BLAS from GNU Scientific Library
+# file conflict, see boo#991155
 License:        GPL-3.0+
 Group:          System/Libraries
-# file conflict, see boo#991155
 Obsoletes:      libgsl0
 
 %description -n %{lcblasname}
@@ -144,16 +143,11 @@ Least-Squares Fitting - Physical Constants - IEEE Floating-Point
 %prep
 %setup -q
 %patch0 -p1
+%patch1 -p1
 %patch5 -p1
 %patch6
 %patch7 -p1
 %patch8
-%ifarch ppc64 ppc64le
-%patch9 -p1
-%endif
-%ifarch %ix86
-%patch10 -p1
-%endif
 
 %build
 autoreconf -fiv
@@ -166,7 +160,7 @@ export CFLAGS="%{optflags}"
 make %{?_smp_mflags}
 
 %check
-make check --jobs 1 || ( find -name \*.log -print -exec cat {} \; ; exit 1 )
+make %{?_smp_mflags} check || ( find -name \*.log -print -exec cat {} \; ; exit 1 )
 
 %install
 %make_install

ppc_test_tolerence.patch

@@ -1,34 +0,0 @@
-Author: Adam Majer <amajer@suse.de>
-Date: Tue May 16 16:50:34 CEST 2017
-Summary: PPC has some failing tests
-
-Double tolerance on one test
-Ignore another, as result is 0 instead of expected 1e-33
-
-
-Index: gsl-2.3/multifit/test_shaw.c
-===================================================================
---- gsl-2.3.orig/multifit/test_shaw.c
-+++ gsl-2.3/multifit/test_shaw.c
-@@ -227,7 +227,7 @@ test_shaw_system_gcv(gsl_rng *rng_p, con
- {
-   const size_t npoints = 200; /* number of points on L-curve */
-   const double tol1 = 1.0e-12;
--  const double tol2 = 1.0e-10;
-+  const double tol2 = 2.0e-10;
-   const double tol3 = 1.0e-5;
-   gsl_vector * reg_param = gsl_vector_alloc(npoints);
-   gsl_vector * G = gsl_vector_alloc(npoints);
-Index: gsl-2.3/rstat/test.c
-===================================================================
---- gsl-2.3.orig/rstat/test.c
-+++ gsl-2.3/rstat/test.c
-@@ -142,7 +142,7 @@ main()
-     for (i = 0; i < 4; ++i)
-       data2[i] += 1.0e9;
- 
--    test_basic(4, data2, tol1);
-+//    test_basic(4, data2, tol1);
- 
-     free(data);
-   }

rstat_test.patch

@@ -0,0 +1,29 @@
+Author: Patrick Alken
+Date: Tue Jun 20 10:27:06 CEST 2017
+
+Index: gsl-2.4/rstat/test.c
+===================================================================
+--- gsl-2.4.orig/rstat/test.c
++++ gsl-2.4/rstat/test.c
+@@ -127,7 +127,7 @@ main()
+   {
+     const size_t N = 2000000;
+     double *data = random_data(N, r);
+-    double data2[] = { 4.0, 7.0, 13.0, 16.0 };
++    double data2[] = { 4.0, 7.0, 13.0, 16.0, -5.0 };
+     size_t i;
+ 
+     test_basic(2, data, tol1);
+@@ -139,10 +139,10 @@ main()
+     test_basic(1500000, data, tol1);
+     test_basic(2000000, data, tol1);
+ 
+-    for (i = 0; i < 4; ++i)
++    for (i = 0; i < 5; ++i)
+       data2[i] += 1.0e9;
+ 
+-    test_basic(4, data2, tol1);
++    test_basic(5, data2, tol1);
+ 
+     free(data);
+   }