commit 80cecb468a0621802ebf82c4e2d6008c466426e109157fe9cc53b04262b3a068 Author: Martin Pluskal Date: Wed Dec 30 12:32:33 2015 +0000 Accepting request 351328 from home:tzotsos Main dependency of OTB OBS-URL: https://build.opensuse.org/request/show/351328 OBS-URL: https://build.opensuse.org/package/show/Application:Geo/insighttoolkit?expand=0&rev=1 diff --git a/.gitattributes b/.gitattributes new file mode 100644 index 0000000..9b03811 --- /dev/null +++ b/.gitattributes @@ -0,0 +1,23 @@ +## Default LFS +*.7z filter=lfs diff=lfs merge=lfs -text +*.bsp filter=lfs diff=lfs merge=lfs -text +*.bz2 filter=lfs diff=lfs merge=lfs -text +*.gem filter=lfs diff=lfs merge=lfs -text +*.gz filter=lfs diff=lfs merge=lfs -text +*.jar filter=lfs diff=lfs merge=lfs -text +*.lz filter=lfs diff=lfs merge=lfs -text +*.lzma filter=lfs diff=lfs merge=lfs -text +*.obscpio filter=lfs diff=lfs merge=lfs -text +*.oxt filter=lfs diff=lfs merge=lfs -text +*.pdf filter=lfs diff=lfs merge=lfs -text +*.png filter=lfs diff=lfs merge=lfs -text +*.rpm filter=lfs diff=lfs merge=lfs -text +*.tbz filter=lfs diff=lfs merge=lfs -text +*.tbz2 filter=lfs diff=lfs merge=lfs -text +*.tgz filter=lfs diff=lfs merge=lfs -text +*.ttf filter=lfs diff=lfs merge=lfs -text +*.txz filter=lfs diff=lfs merge=lfs -text +*.whl filter=lfs diff=lfs merge=lfs -text +*.xz filter=lfs diff=lfs merge=lfs -text +*.zip filter=lfs diff=lfs merge=lfs -text +*.zst filter=lfs diff=lfs merge=lfs -text diff --git a/.gitignore b/.gitignore new file mode 100644 index 0000000..57affb6 --- /dev/null +++ b/.gitignore @@ -0,0 +1 @@ +.osc diff --git a/InsightToolkit-4.8.2.tar.gz b/InsightToolkit-4.8.2.tar.gz new file mode 100644 index 0000000..56937cc --- /dev/null +++ b/InsightToolkit-4.8.2.tar.gz @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:d8d5e3aea700588c60b01418c440b2d95b517ea18dd4c834c5164354e53596af +size 17400381 diff --git a/doubleconv.patch b/doubleconv.patch new file mode 100644 index 0000000..28204f6 --- /dev/null +++ b/doubleconv.patch @@ -0,0 +1,16 @@ +Description: Upstream provides an option to build against + a system installed double conversion but it appears as + broken at least on Debian +Author: Mathieu Malaterre +Bug-Debian: http://bugs.debian.org/733629 + +--- insighttoolkit4-4.5.0.orig/Modules/Core/Common/src/CMakeLists.txt ++++ insighttoolkit4-4.5.0/Modules/Core/Common/src/CMakeLists.txt +@@ -108,6 +108,7 @@ endif() + ### generating libraries + add_library( ITKCommon ${ITK_LIBRARY_BUILD_TYPE} ${ITKCommon_SRCS}) + ++include_directories( /usr/include/double-conversion ) + target_link_libraries(ITKCommon + itksys + ITKVNLInstantiation diff --git a/insighttoolkit.changes b/insighttoolkit.changes new file mode 100644 index 0000000..d420f6a --- /dev/null +++ b/insighttoolkit.changes @@ -0,0 +1,24 @@ +---------------------------------------------------------------------------- +* Sat Dec 26 15:34:00 UTC 2015 Angelos Tzotsos - 4.8.2 + +- Update to 4.8.2 + +---------------------------------------------------------------------------- +* Fri Aug 14 00:40:00 UTC 2015 Angelos Tzotsos - 4.7.2 + +- Update to 4.7.2 + +---------------------------------------------------------------------------- +* Fri Feb 27 21:24:00 UTC 2015 Angelos Tzotsos + +- Renamed package to insighttoolkit + +---------------------------------------------------------------------------- +* Wed Jan 14 01:14:00 UTC 2015 Angelos Tzotsos - 4.6.0 + +- Update to 4.6.0 + +---------------------------------------------------------------------------- +* Sat Mar 01 23:03:00 UTC 2014 Angelos Tzotsos - 4.5.1 + +- Initial build diff --git a/insighttoolkit.spec b/insighttoolkit.spec new file mode 100644 index 0000000..5986f02 --- /dev/null +++ b/insighttoolkit.spec @@ -0,0 +1,175 @@ +# +# spec file for package insighttoolkit +# +# Copyright (c) 2015 Angelos Tzotsos . +# +# All modifications and additions to the file contributed by third parties +# remain the property of their copyright owners, unless otherwise agreed +# upon. The license for this file, and modifications and additions to the +# file, is the same license as for the pristine package itself (unless the +# license for the pristine package is not an Open Source License, in which +# case the license is the MIT License). An "Open Source License" is a +# license that conforms to the Open Source Definition (Version 1.9) +# published by the Open Source Initiative. + +# Please submit bugfixes or comments via http://bugs.opensuse.org/ + +# norootforbuild + +%define tarname InsightToolkit + +Name: insighttoolkit +Version: 4.8.2 +Release: 1 +Summary: Insight Segmentation and Registration Toolkit +Group: Development/Libraries +License: Apache-2 +URL: http://www.itk.org +Source0: %{tarname}-%{version}.tar.gz +Patch0: nrrdio-linking.patch +Patch1: doubleconv.patch +BuildRoot: %{_tmppath}/%{name}-%{version}-build + +BuildRequires: cmake >= 2.8.0 +BuildRequires: gcc-c++ +BuildRequires: gcc +BuildRequires: swig +BuildRequires: zlib-devel +BuildRequires: libpng-devel +BuildRequires: libtiff-devel +BuildRequires: fftw3-devel +BuildRequires: fftw3-threads-devel +BuildRequires: dcmtk-devel +# BuildRequires: gdcm-devel +BuildRequires: hdf5-devel +BuildRequires: python-devel +BuildRequires: vtk-devel +BuildRequires: python-vtk +BuildRequires: libjpeg-devel +BuildRequires: libexpat-devel +BuildRequires: sed +BuildRequires: fdupes + + +%description +ITK is an open-source, cross-platform system that provides developers with an extensive suite of software tools for image analysis + +%package devel +Summary: Development files for ITK +Group: Development/Libraries +Requires: lib%{name}4 = %{version} +Requires: zlib-devel +Requires: libpng-devel +Requires: libtiff-devel +Requires: fftw3-devel +Requires: fftw3-threads-devel +Requires: dcmtk-devel +Requires: hdf5-devel +Requires: vtk-devel +Requires: libjpeg-devel +Requires: libexpat-devel +Provides: lib%{name}-devel + +%description devel +Development files for the ITK library. ITK is an open-source, cross-platform system that provides developers with an extensive suite of software tools for image analysis + +%package -n lib%{name}4 +Summary: ITK static libraries +Group: System/Libraries + +%description -n lib%{name}4 +Shared ITK library. ITK is an open-source, cross-platform system that provides developers with an extensive suite of software tools for image analysis. + +%prep +%setup -q -n %{tarname}-%{version} +%patch0 -p1 +%patch1 -p1 + +%build +cd .. +mkdir temp +cd temp +cmake -DBUILD_EXAMPLES:BOOL=ON \ + -DBUILD_SHARED_LIBS:BOOL=ON \ + -DBUILD_TESTING:BOOL=OFF \ + -DCMAKE_VERBOSE_MAKEFILE:BOOL=ON \ + -DCMAKE_EXPORT_COMPILE_COMMANDS:BOOL=ON \ + -DCMAKE_SKIP_RPATH:BOOL=ON \ + -DUSE_FFTWF=ON \ + -DITK_USE_FFTWD:BOOL=ON \ + -DITK_USE_FFTWF:BOOL=ON \ + -DITK_USE_SYSTEM_FFTW:BOOL=ON \ + -DITK_USE_STRICT_CONCEPT_CHECKING:BOOL=ON \ + -DITK_USE_SYSTEM_DOUBLECONVERSION:BOOL=OFF \ + -DITK_USE_SYSTEM_DCMTK:BOOL=ON \ + -DITK_USE_SYSTEM_GDCM:BOOL=OFF \ + -DITK_USE_SYSTEM_HDF5:BOOL=ON \ + -DITK_USE_SYSTEM_JPEG:BOOL=ON \ + -DITK_USE_SYSTEM_PNG:BOOL=ON \ + -DITK_USE_SYSTEM_TIFF:BOOL=ON \ + -DITK_USE_SYSTEM_VXL:BOOL=OFF \ + -DITK_USE_SYSTEM_ZLIB:BOOL=ON \ + -DITK_USE_SYSTEM_GCCXML:BOOL=OFF \ + -DITK_USE_SYSTEM_SWIG:BOOL=ON \ + -DITK_USE_SYSTEM_EXPAT:BOOL=ON \ + -DModule_ITKDCMTK:BOOL=ON \ + -DModule_ITKIOPhilipsREC:BOOL=OFF \ + -DModule_ITKLevelSetsv4Visualization:BOOL=OFF \ + -DModule_ITKReview:BOOL=OFF \ + -DModule_ITKVideoBridgeOpenCV:BOOL=OFF \ + -DModule_ITKVideoBridgeVXL:BOOL=OFF \ + -DModule_ITKVtkGlue:BOOL=OFF \ + -DModule_ITKDeprecated:BOOL=OFF \ + -DITKV3_COMPATIBILITY:BOOL=ON \ + -DVCL_INCLUDE_CXX_0X:BOOL=ON \ + -DITK_WRAP_DIMS="2;3;4" \ + -DITK_WRAP_double:BOOL=ON \ + -DITK_WRAP_vector_double:BOOL=ON \ + -DITK_WRAP_covariant_vector_double:BOOL=ON \ + -DITK_WRAP_complex_double:BOOL=ON \ + -DITK_WRAPPING:BOOL=OFF \ + -DITK_WRAP_PYTHON:BOOL=OFF \ + -DCMAKE_INSTALL_PREFIX:PATH=/usr \ + -DCMAKE_BUILD_TYPE:STRING="Release" ../%{tarname}-%{version}/ + +make VERBOSE=1 %{?_smp_mflags} + + +%install +cd ../temp +make install DESTDIR=%{buildroot} + +%if "%{_lib}" == "lib64" +mkdir -p %{buildroot}/usr/lib64 +mv %{buildroot}/usr/lib/* %{buildroot}/usr/lib64/ +sed -i 's|/lib/|/lib64/|g' %{buildroot}/usr/lib64/cmake/ITK-4.8/ITKConfig.cmake +sed -i 's|/lib/|/lib64/|g' %{buildroot}/usr/lib64/cmake/ITK-4.8/ITKTargets.cmake +sed -i 's|/lib/|/lib64/|g' %{buildroot}/usr/lib64/cmake/ITK-4.8/ITKTargets-release.cmake +%endif +rm -rf %{buildroot}/usr/lib/debug + +%fdupes %{buildroot} + + +%clean +rm -rf %{buildroot} + +%post -n lib%{name}4 -p /sbin/ldconfig + +%postun -n lib%{name}4 -p /sbin/ldconfig + +%files -n lib%{name}4 +%defattr(644,root,root,755) +# %dir %{_libdir}/ +%{_libdir}/*.so.1 + + +%files devel +%defattr(-,root,root,-) +%{_includedir}/* +%{_libdir}/lib*.so +%{_libdir}/cmake/ +%{_bindir}/itkTestDriver +%{_datadir}/* + +%changelog diff --git a/nrrdio-linking.patch b/nrrdio-linking.patch new file mode 100644 index 0000000..b4348af --- /dev/null +++ b/nrrdio-linking.patch @@ -0,0 +1,15 @@ +Description: Link libITKNrrdIO with -lm (needed for sqrt) +Author: Steve Robbins +Forwarded: no + +--- insighttoolkit4-4.5.0.orig/Modules/ThirdParty/NrrdIO/src/NrrdIO/CMakeLists.txt ++++ insighttoolkit4-4.5.0/Modules/ThirdParty/NrrdIO/src/NrrdIO/CMakeLists.txt +@@ -64,7 +64,7 @@ + ADD_DEFINITIONS(-DTEEM_ZLIB=1) + + ADD_LIBRARY(ITKNrrdIO ${nrrdio_SRCS} ) +-TARGET_LINK_LIBRARIES(ITKNrrdIO ${ITKZLIB_LIBRARIES}) ++TARGET_LINK_LIBRARIES(ITKNrrdIO ${ITKZLIB_LIBRARIES} -lm) + + IF(ITK_LIBRARY_PROPERTIES) + SET_TARGET_PROPERTIES(ITKNrrdIO PROPERTIES ${ITK_LIBRARY_PROPERTIES})