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mpich/mpich.spec
Nicolas Morey 5734d84e32 - Update to 4.2.2
-  Update embedded libfabric to v1.20.1 and fix compilation with GCC 14.
  -  Fix dataloop support for MPIX_Type_iov routines
  -  Fix crash in Hydra when system has many local ip addresses
  -  Fix RMA fallback check in ch4:ofi netmod
  -  Fix MPI_UNDEFINED handling in mpi_f08 module
  -  Fix Slurm environment variable inheritance in Hydra
  -  Fix multiple issues with large count support in ROMIO
  -  Fix potential hang in init using PMIx client and nonstandard keys
  -  Fix crash if PMIx client cannot get appnum from server during init
  -  Fix other build errors and warnings
  -  Disable flat_namespace to build libmpifort on macOS by default
  -  Prefix warning messages with "MPICH"
  -  Add --disable-doc configure option
  -  Fix support for building MPICH Fortran support with Xcode 15 on macOS
  -  Fix bug in MPI_WIN_SHARED_QUERY when window is not shared
  -  Fix bug in ch4/ofi gpu pipelining
  -  Fixes for Intel GPU support
  -  Fix memory leak in ch4/shm collectives
  -  Fix bug in MPI_COMM_SPLIT with intercommunicators and non-zero root
  -  Fix bug in DAOS ROMIO driver
  -  Fix bug in cycling error code array
  -  Return an error if there is failure to create a datatype in mpi_f08
     module for noncontiguous user data
  -  Return an error when shared memory segment creation fails
  -  Complete support MPI 4.1 specification
  -  Experimental thread communicator feature (e.g. MPIX_Threadcomm_init).
     See paper "Frustrated With MPI+Threads? Try MPIxThreads!",
     https://doi.org/10.1145/3615318.3615320.
  -  Experimental datatype functions MPIX_Type_iov_len and MPIX_Type_Iov

OBS-URL: https://build.opensuse.org/package/show/science:HPC/mpich?expand=0&rev=74
2024-08-12 16:29:03 +00:00

631 lines
16 KiB
RPMSpec

#
# spec file
#
# Copyright (c) 2024 SUSE LLC
#
# All modifications and additions to the file contributed by third parties
# remain the property of their copyright owners, unless otherwise agreed
# upon. The license for this file, and modifications and additions to the
# file, is the same license as for the pristine package itself (unless the
# license for the pristine package is not an Open Source License, in which
# case the license is the MIT License). An "Open Source License" is a
# license that conforms to the Open Source Definition (Version 1.9)
# published by the Open Source Initiative.
# Please submit bugfixes or comments via https://bugs.opensuse.org/
#
%global flavor @BUILD_FLAVOR@%nil
# Static libraries are disabled by default
# for non HPC builds
# To enable them, simply uncomment:
# % define build_static_devel 1
%define pname mpich
%define vers 4.2.2
%define _vers 4_2_2
%if "%{flavor}" == ""
ExclusiveArch: do_not_build
%{bcond_with hpc}
%endif
%if "%{flavor}" == "standard"
%define build_flavor ucx
%{bcond_with hpc}
%endif
%if "%{flavor}" == "testsuite"
%define build_flavor ucx
%define testsuite 1
%{bcond_with hpc}
%endif
%if "%{flavor}" == "ofi"
%define build_flavor ofi
%{bcond_with hpc}
%endif
%if "%{flavor}" == "ofi-testsuite"
%define build_flavor ofi
%define testsuite 1
%{bcond_with hpc}
%endif
%if "%flavor" == "gnu-hpc"
%define compiler_family gnu
%undefine c_f_ver
%define build_flavor ucx
%define build_static_devel 1
%{bcond_without hpc}
%endif
%if "%flavor" == "gnu-hpc-testsuite"
%define compiler_family gnu
%undefine c_f_ver
%define testsuite 1
%define build_flavor ucx
%{bcond_without hpc}
%endif
%if "%flavor" == "gnu-hpc-ofi"
%define compiler_family gnu
%undefine c_f_ver
%define build_flavor ofi
%define build_static_devel 1
%{bcond_without hpc}
%endif
%if "%flavor" == "gnu-hpc-ofi-testsuite"
%define compiler_family gnu
%undefine c_f_ver
%define testsuite 1
%define build_flavor ofi
%{bcond_without hpc}
%endif
%if "%flavor" == "gnu7-hpc"
%define compiler_family gnu
%define c_f_ver 7
%define build_flavor ucx
%define build_static_devel 1
%{bcond_without hpc}
%endif
%if "%flavor" == "gnu7-hpc-testsuite"
%define compiler_family gnu
%define c_f_ver 7
%define testsuite 1
%define build_flavor ucx
%{bcond_without hpc}
%endif
%if "%flavor" == "gnu7-hpc-ofi"
%define compiler_family gnu
%define c_f_ver 7
%define build_flavor ofi
%define build_static_devel 1
%{bcond_without hpc}
%endif
%if "%flavor" == "gnu7-hpc-ofi-testsuite"
%define compiler_family gnu
%define c_f_ver 7
%define testsuite 1
%define build_flavor ofi
%{bcond_without hpc}
%endif
%if "%flavor" == "gnu8-hpc"
%define compiler_family gnu
%define c_f_ver 8
%define build_flavor ucx
%define build_static_devel 1
%{bcond_without hpc}
%endif
%if "%flavor" == "gnu8-hpc-testsuite"
%define compiler_family gnu
%define c_f_ver 8
%define testsuite 1
%define build_flavor ucx
%{bcond_without hpc}
%endif
%if "%flavor" == "gnu8-hpc-ofi"
%define compiler_family gnu
%define c_f_ver 8
%define build_flavor ofi
%define build_static_devel 1
%{bcond_without hpc}
%endif
%if "%flavor" == "gnu8-hpc-ofi-testsuite"
%define compiler_family gnu
%define c_f_ver 8
%define testsuite 1
%define build_flavor ofi
%{bcond_without hpc}
%endif
%if "%flavor" == "gnu9-hpc"
%define compiler_family gnu
%define c_f_ver 9
%define build_flavor ucx
%define build_static_devel 1
%{bcond_without hpc}
%endif
%if "%flavor" == "gnu9-hpc-testsuite"
%define compiler_family gnu
%define c_f_ver 9
%define testsuite 1
%define build_flavor ucx
%{bcond_without hpc}
%endif
%if "%flavor" == "gnu9-hpc-ofi"
%define compiler_family gnu
%define c_f_ver 9
%define build_flavor ofi
%define build_static_devel 1
%{bcond_without hpc}
%endif
%if "%flavor" == "gnu9-hpc-ofi-testsuite"
%define compiler_family gnu
%define c_f_ver 9
%define testsuite 1
%define build_flavor ofi
%{bcond_without hpc}
%endif
%if "%flavor" == "gnu10-hpc"
%define compiler_family gnu
%define c_f_ver 10
%define build_flavor ucx
%define build_static_devel 1
%{bcond_without hpc}
%endif
%if "%flavor" == "gnu10-hpc-testsuite"
%define compiler_family gnu
%define c_f_ver 10
%define testsuite 1
%define build_flavor ucx
%{bcond_without hpc}
%endif
%if "%flavor" == "gnu10-hpc-ofi"
%define compiler_family gnu
%define c_f_ver 10
%define build_flavor ofi
%define build_static_devel 1
%{bcond_without hpc}
%endif
%if "%flavor" == "gnu10-hpc-ofi-testsuite"
%define compiler_family gnu
%define c_f_ver 10
%define testsuite 1
%define build_flavor ofi
%{bcond_without hpc}
%endif
%if "%{build_flavor}" != "ucx"
%define pack_suff %{?build_flavor:-%{build_flavor}}
%endif
%if "%{build_flavor}" == "ucx"
%ifarch %ix86 %arm
# UCX is not available on 32b system so silently fallback
# on ch4:ofi
%define build_flavor ofi
%endif
%endif
%if %{without hpc}
%define module_name mpich%{?pack_suff}
%define p_prefix /usr/%_lib/mpi/gcc/%{module_name}
%define p_bindir %{p_prefix}/bin
%define p_datadir %{p_prefix}/share
%define p_includedir %{p_prefix}/include
%define p_mandir %{p_datadir}/man
%define p_libdir %{p_prefix}/%{_lib}
%define p_libexecdir %{p_prefix}/%{_lib}
%define _moduledir /usr/share/modules/gnu-%{module_name}
%define package_name %{pname}%{?pack_suff}
%else
%{hpc_init -M -c %compiler_family %{?c_f_ver:-v %{c_f_ver}} -m mpich %{?pack_suff:-e %{build_flavor}} %{?mpi_f_ver:-V %{mpi_f_ver}}}
%define p_prefix %{hpc_prefix}
%define p_bindir %{hpc_bindir}
%define p_datadir %{hpc_datadir}
%define p_includedir %{hpc_includedir}
%define p_mandir %{hpc_mandir}
%define p_libdir %{hpc_libdir}
%define p_libexecdir %{hpc_libexecdir}
%define package_name %{pname}%{?pack_suff}_%{_vers}-%{compiler_family}%{?c_f_ver}-hpc
%global hpc_mpich_dep_version %(VER=%{?m_f_ver}; echo -n ${VER})
%global hpc_mpich_dir mpich
%global hpc_mpich_pack_version %{hpc_mpich_dep_version}
ExcludeArch: i586 %arm s390
%endif
Name: %{package_name}%{?testsuite:-testsuite}
Version: %{vers}
Release: 0
Summary: High-performance and widely portable implementation of MPI
License: MIT
Group: Development/Libraries/Parallel
URL: http://www.mpich.org/
Source0: http://www.mpich.org/static/downloads/%{version}/mpich-%{vers}.tar.gz
Source1: mpivars.sh
Source2: mpivars.csh
Source3: macros.hpc-mpich
Source100: _multibuild
Patch1: autogen-only-deal-with-json-yaksa-if-enabled.patch
Patch2: autoconf-pull-dynamic-and-not-static-libs-from-pkg-config.patch
BuildRoot: %{_tmppath}/%{name}-%{version}-build
BuildRequires: fdupes
BuildRequires: libjson-c-devel
BuildRequires: libtool
BuildRequires: pkg-config
%ifnarch s390 s390x %{arm} ppc64
BuildRequires: valgrind-devel
%endif
%ifnarch s390 s390x armv7hl
BuildRequires: libnuma-devel
%endif
BuildRequires: libtool
BuildRequires: libtool
BuildRequires: mpi-selector
BuildRequires: python3-devel
%if "%{build_flavor}" == "ofi"
BuildRequires: libfabric-devel
%endif
%if "%{build_flavor}" == "ucx"
BuildRequires: libucm-devel >= 1.7.0
BuildRequires: libucp-devel >= 1.7.0
BuildRequires: libucs-devel >= 1.7.0
BuildRequires: libuct-devel >= 1.7.0
# UCX is only available for 64b archs
ExcludeArch: %ix86 %arm
%endif
Provides: mpi
%if %{without hpc}
BuildRequires: Modules
BuildRequires: gcc-c++
BuildRequires: gcc-fortran
BuildRequires: mpi-selector
Requires: mpi-selector
Requires(preun):mpi-selector
%else
BuildRequires: %{compiler_family}%{?c_f_ver}-compilers-hpc-macros-devel
BuildRequires: lua-lmod
BuildRequires: suse-hpc
%hpc_requires
%endif
%if 0%{?testsuite}
BuildRequires: %package_name = %{version}
%endif
%description
MPICH is a high performance and widely portable implementation of the Message
Passing Interface (MPI) standard.
The goals of MPICH are:
* to provide an MPI implementation that efficiently supports different
computation and communication platforms including commodity clusters
(desktop systems, shared-memory systems, multicore architectures),
high-speed networks and proprietary high-end computing systems
(Blue Gene, Cray)
* to enable cutting-edge research in MPI through an easy-to-extend modular
framework for other derived implementations
%if 0%{!?testsuite:1}
%package devel
Summary: SDK for MPICH %{?with_hpc:HPC} version %{version}
Group: Development/Libraries/Parallel
Requires: %{name} = %{version}
%if %{without hpc}
Requires: libstdc++-devel
%else
%hpc_requires_devel
%endif
Requires: %{name} = %{version}
%description devel
MPICH is a freely available, portable implementation of MPI, the
Standard for message-passing libraries. This package contains manpages,
headers and libraries needed for developing MPI applications.
This RPM contains all the wrappers necessary to compile, link, and run
Open MPI jobs.
%if %{with hpc}
%package macros-devel
Summary: HPC Macros for MPICH version %{version}
Group: Development/Libraries/Parallel
Requires: %{name}-devel = %{version}
Provides: %{pname}-hpc-macros-devel = %{version}
Conflicts: otherproviders(%{pname}-hpc-macros-devel)
%description macros-devel
HPC Macros for building RPM packages for MPICH version %{version}.
%endif
%if 0%{?build_static_devel}
%package devel-static
Summary: Static libraries for MPICH %{?with_hpc:HPC} version %{version}
Group: Development/Libraries/Parallel
Requires: %{name}-devel = %{version}
%description devel-static
MPICH is a freely available, portable implementation of MPI, the
Standard for message-passing libraries. This package contains manpages,
headers and libraries needed for developing MPI applications.
This RPM contains the static library files, which are packaged separately from
the dynamic library and headers.
%endif
%if %{with hpc}
%{hpc_master_package -L -a}
%{hpc_master_package -a devel}
%{hpc_master_package macros-devel}
%{hpc_master_package -a devel-static}
%endif # ?with_hpc
%endif # ! testsuite
%prep
echo FLAVOR %{flavor}
%if %{with hpc}
echo with HPC
%endif
%if %{without hpc}
echo without HPC
%endif
%autosetup -p0 -n mpich-%{version}%{?rc_ver}
# Make sure prebuilt dependencies are used and not mpich submodules
rm -R modules/{ucx,libfabric,json-c}
%build
%global _lto_cflags %{_lto_cflags} -ffat-lto-objects
# GCC10 needs an extra flag to allow badly passed parameters
%if 0%{?suse_version} > 1500 || 0%{?hpc_gnu_dep_version} >= 10
export FFLAGS="-fallow-argument-mismatch $FFLAGS"
export FCFLAGS="-fallow-argument-mismatch $FCFLAGS"
%endif
./autogen.sh --without-ucx --without-ofi --without-json
%{?with_hpc:%hpc_debug}
%if %{with hpc}
%{hpc_setup}
%{hpc_configure} \
%else
%configure \
--prefix=%{p_prefix} \
--exec-prefix=%{p_prefix} \
--datadir=%{p_datadir} \
--bindir=%{p_bindir} \
--includedir=%{p_includedir} \
--libdir=%{p_libdir} \
--libexecdir=%{p_libexecdir} \
--mandir=%{p_mandir} \
%endif
--docdir=%{_datadir}/doc/%{name} \
--disable-rpath \
--disable-wrapper-rpath \
%if "%{build_flavor}" == "ofi"
--with-ofi \
--with-device=ch4:ofi \
%endif
%if "%{build_flavor}" == "ucx"
--with-ucx \
--with-device=ch4:ucx \
%endif
CFLAGS="%optflags -fPIC" \
CXXLAGS="%optflags -fPIC" \
MPICHLIB_CFLAGS="%{optflags}" \
MPICHLIB_CXXFLAGS="%{optflags}"
make %{?_smp_mflags} VERBOSE=1
%install
make DESTDIR=%{buildroot} install
# sanitize .la files
list="$(find %{buildroot} -name "*.la" -printf "%%h\n" | sort | uniq)"
for dir in ${list}
do
deps="${deps} -L${dir##%{buildroot}}"
done
for dir in ${list}
do
%if !0%{?build_static_devel}
rm -f ${dir}/*.la
%else
for file in ${dir}/*.la
do
sed -i -e "s@ [^[:space:]]*home[^[:space:]\']*@${deps}@" \
-e "s@ [^[:space:]]*home[^[:space:]\']*@@g" \
-e "s@-L.*.libs @@g" ${file}
done
%endif
done
# sanitize .la files
%if !0%{?build_static_devel}
find %{buildroot} -name "*.a" -delete
%endif
%fdupes %{buildroot}%{p_mandir}
%fdupes %{buildroot}%{p_datadir}
%fdupes %{buildroot}%{p_libdir}/pkgconfig
%if 0%{?testsuite}
# Remove everything from testsuite package
# It is all contained by mpich packages
rm -rf %{buildroot}/*
%check
make check
%else
%if %{without hpc}
# make and install mpivars files
install -m 0755 -d %{buildroot}%{_bindir}
sed -e 's,prefix,%p_prefix,g' -e 's,libdir,%{p_libdir},g' %{S:1} > %{buildroot}%{p_bindir}/mpivars.sh
sed -e 's,prefix,%p_prefix,g' -e 's,libdir,%{p_libdir},g' %{S:2} > %{buildroot}%{p_bindir}/mpivars.csh
mkdir -p %{buildroot}%{_moduledir}
cat << EOF > %{buildroot}%{_moduledir}/%{version}
#%%Module
proc ModulesHelp { } {
global dotversion
puts stderr "\tLoads the gnu - mpich %{version} Environment"
}
module-whatis "Loads the gnu mpich %{version} Environment."
conflict gnu-mpich
prepend-path PATH %{%p_bindir}
prepend-path INCLUDE %{p_includedir}
prepend-path INCLUDE %{p_libdir}
prepend-path MANPATH %{p_mandir}
prepend-path LD_LIBRARY_PATH %{p_libdir}
EOF
cat << EOF > %{buildroot}%{_moduledir}/.version
#%%Module1.0
set ModulesVersion "%{version}"
EOF
%else # with hpc
install -d -m 755 %{buildroot}%{_rpmmacrodir}
cp %{S:3} %{buildroot}%{_rpmmacrodir}
%hpc_write_modules_files
#%%Module1.0#####################################################################
proc ModulesHelp { } {
puts stderr " "
puts stderr "This module loads the %{pname} library built with the %{compiler_family} toolchain."
puts stderr "\nVersion %{version}\n"
}
module-whatis "Name: %{pname} built with %{compiler_family} toolchain"
module-whatis "Version: %{version}"
module-whatis "Category: runtime library"
module-whatis "Description: %{SUMMARY:0}"
module-whatis "URL: %{url}"
set version %{version}
prepend-path PATH %{hpc_bindir}
prepend-path MANPATH %{hpc_mandir}
prepend-path LD_LIBRARY_PATH %{hpc_libdir}
prepend-path MODULEPATH %{hpc_modulepath}
prepend-path MPI_DIR %{hpc_prefix}
%{hpc_modulefile_add_pkgconfig_path}
family "MPI"
EOF
cat <<EOF > %{buildroot}/%{p_bindir}/mpivars.sh
%hpc_setup_compiler
module load %{hpc_mpi_family}%{?pack_suff}/%{version}
EOF
sed -e "s/export/setenv/" -e "s/=/ /" \
%{buildroot}/%{p_bindir}/mpivars.sh > \
%{buildroot}/%{p_bindir}/mpivars.csh
mkdir -p %{buildroot}%{_sysconfdir}/rpm
%endif # with hpc
find %{buildroot} -type f -name "*.la" -exec rm -f {} ';'
%fdupes -s %{buildroot}
%post
/sbin/ldconfig
%if %{without hpc}
# Always register. We might be already registered in the case of an udate
# but mpi-selector handles it fine
/usr/bin/mpi-selector \
--register %{name}%{?pack_suff} \
--source-dir %{p_bindir} \
--yes
%endif
%postun
/sbin/ldconfig
%if %{without hpc}
# Only unregister when uninstalling
if [ "$1" = "0" ]; then
/usr/bin/mpi-selector --unregister %{name}%{?pack_suff} --yes
# Deregister the default if we are uninstalling it
if [ "$(/usr/bin/mpi-selector --system --query)" = "%{name}%{?pack_suff}" ]; then
/usr/bin/mpi-selector --system --unset --yes
fi
fi
%else
%hpc_module_delete_if_default
%endif
%files
%defattr(-,root,root)
%doc CHANGES COPYRIGHT README README.envvar RELEASE_NOTES
%if %{without hpc}
%dir /usr/%_lib/mpi
%dir /usr/%_lib/mpi/gcc
%dir /usr/share/modules
%dir %{_moduledir}
%{_moduledir}
%else
%hpc_mpi_dirs
%hpc_modules_files
%endif
%doc %{_datadir}/doc/*
%dir %{p_prefix}
%dir %{p_bindir}
%dir %{p_datadir}
%dir %{p_includedir}
%dir %{p_mandir}
%dir %{p_mandir}/man1
%dir %{p_mandir}/man3
%dir %{p_libdir}
%{p_bindir}/*
%{p_mandir}/man1/*
%{p_libdir}/*.so.*
%files devel
%defattr(-,root,root)
%dir %{p_libdir}/pkgconfig
%{p_mandir}/man3/*
%{p_includedir}
%{p_libdir}/*.so
%{p_libdir}/pkgconfig/mpich.pc
%if 0%{?build_static_devel}
%files devel-static
%defattr(-,root,root)
%{p_libdir}/*.a
%endif
%if %{with hpc}
%files macros-devel
%defattr(-,root,root)
%config %{_rpmmacrodir}/macros.hpc-mpich
%endif # with hpc
%endif # !testsuite
%changelog