diff --git a/_service b/_service index 3b72400..e34b008 100644 --- a/_service +++ b/_service @@ -8,7 +8,7 @@ @PARENT_TAG@.@TAG_OFFSET@.%h v(.*) \1 - 88d8972a4085f6492dc38786c925f9dec446d49e + 9ac5471035b9066462506bc4d92be7a340a8058e openmpi*.tar diff --git a/openmpi-4.0.5.0.88d8972a4085.tar.bz2 b/openmpi-4.0.5.0.88d8972a4085.tar.bz2 deleted file mode 100644 index 3c7ffd9..0000000 --- a/openmpi-4.0.5.0.88d8972a4085.tar.bz2 +++ /dev/null @@ -1,3 +0,0 @@ -version https://git-lfs.github.com/spec/v1 -oid sha256:96c05d6b25fb8781c41a6c2cda9cf069e265738557ce4c3dfdc35587fa1b88e7 -size 6301925 diff --git a/openmpi-4.1.0.0.9ac5471035.tar.bz2 b/openmpi-4.1.0.0.9ac5471035.tar.bz2 new file mode 100644 index 0000000..3051b22 --- /dev/null +++ b/openmpi-4.1.0.0.9ac5471035.tar.bz2 @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:c6b9013b8fc5788371477d68b8a3273781c36b57600b4957af705aa70dc0688e +size 6418922 diff --git a/openmpi4.changes b/openmpi4.changes index 9f71c9d..b591b69 100644 --- a/openmpi4.changes +++ b/openmpi4.changes @@ -1,3 +1,46 @@ +------------------------------------------------------------------- +Wed Mar 24 08:01:35 UTC 2021 - Egbert Eich + +- Update to version 4.1.0 + * collectives: Add HAN and ADAPT adaptive collectives components. + Both components are off by default and can be enabled by specifying + "mpirun --mca coll_adapt_priority 100 --mca coll_han_priority 100 ...". + We intend to enable both by default in Open MPI 5.0. + * OMPIO is now the default for MPI-IO on all filesystems, including + Lustre (prior to this, ROMIO was the default for Lustre). Many + thanks to Mark Dixon for identifying MPI I/O issues and providing + access to Lustre systems for testing. + * Minor MPI one-sided RDMA performance improvements. + * Fix hcoll MPI_SCATTERV with MPI_IN_PLACE. + * Add AVX support for MPI collectives. + * Updates to mpirun(1) about "slots" and PE=x values. + * Fix buffer allocation for large environment variables. Thanks to + @zrss for reporting the issue. + * Upgrade the embedded OpenPMIx to v3.2.2. + * Fix issue with extra-long values in MCA files. Thanks to GitHub + user @zrss for bringing the issue to our attention. + * UCX: Fix zero-sized datatype transfers. + * Fix --cpu-list for non-uniform modes. + * Fix issue in PMIx callback caused by missing memory barrier on Arm platforms. + * OFI MTL: Various bug fixes. + * Fixed issue where MPI_TYPE_CREATE_RESIZED would create a datatype + with unexpected extent on oddly-aligned datatypes. + * collectives: Adjust default tuning thresholds for many collective + algorithms + * runtime: fix situation where rank-by argument does not work + * Portals4: Clean up error handling corner cases + * runtime: Remove --enable-install-libpmix option, which has not + worked since it was added + * UCX: Allow UCX 1.8 to be used with the btl uct + * UCX: Replace usage of the deprecated NB API of UCX with NBX + * OMPIO: Add support for the IME file system + * OFI/libfabric: Added support for multiple NICs + * OFI/libfabric: Added support for Scalable Endpoints + * OFI/libfabric: Added btl for one-sided support + * OFI/libfabric: Multiple small bugfixes + * libnbc: Adding numerous performance-improving algorithms +- Removed: reproducible.patch - replaced by spec file settings. + ------------------------------------------------------------------- Tue Sep 8 18:35:17 UTC 2020 - Nicolas Morey-Chaisemartin diff --git a/openmpi4.spec b/openmpi4.spec index 9b7ad2d..3f2517b 100644 --- a/openmpi4.spec +++ b/openmpi4.spec @@ -1,7 +1,7 @@ # -# spec file for package openmpi4 +# spec file for package %{package_name}%{?testsuite:-testsuite} # -# Copyright (c) 2020 SUSE LLC +# Copyright (c) 2021 SUSE LLC # Copyright (c) 2004-2005 The Trustees of Indiana University and Indiana # University Research and Technology # Corporation. All rights reserved. @@ -42,8 +42,8 @@ # % define build_static_devel 1 %define pname openmpi -%define vers 4.0.5 -%define _vers 4_0_5 +%define vers 4.1.0 +%define _vers 4_1_0 %define m_f_ver 4 %bcond_with ringdisabled @@ -115,7 +115,7 @@ ExclusiveArch: do_not_build %global hpc_openmpi_pack_version %{hpc_openmpi_dep_version} %endif -%define git_ver .0.88d8972a4085 +%define git_ver .0.9ac5471035 ############################################################################# # @@ -135,7 +135,6 @@ Source2: openmpi4-rpmlintrc Source3: macros.hpc-openmpi Source4: mpivars.sh Source5: mpivars.csh -Patch0: reproducible.patch Provides: mpi BuildRoot: %{_tmppath}/%{name}-%{version}-build BuildRequires: autoconf @@ -163,7 +162,7 @@ BuildRequires: gcc-c++ BuildRequires: gcc-fortran BuildRequires: mpi-selector Requires: mpi-selector -Requires(preun): mpi-selector +Requires(preun):mpi-selector Requires: %{package_name}-libs = %{version} %else BuildRequires: %{compiler_family}%{?c_f_ver}-compilers-hpc-macros-devel @@ -210,7 +209,7 @@ Requires: openssh %define mpi_bindir %hpc_bindir %define mpi_libdir %hpc_libdir %define mpi_datadir %hpc_datadir -%define mpi_helpdir %{mpi_datadir}/openmpi +%define mpi_helpdir %{mpi_datadir}/openmpi %define mpi_includedir %hpc_includedir %define mpi_mandir %hpc_mandir @@ -289,7 +288,7 @@ programming API, which is a Partitioned Global Address Space (PGAS) abstraction layer providing inter-process communication using one-sided communication techniques. -This package provides the development files for Open MPI/OpenSHMEM +This package provides the development files for Open MPI/OpenSHMEM version %{m_f_ver}, such as wrapper compilers and header files for MPI/OpenSHMEM development. @@ -401,8 +400,6 @@ openmpi%{m_f_ver}-libs EOF %endif -%patch0 -p1 - # Live patch the VERSION file sed -i -e 's/^greek=.*$/greek=%{git_ver}/' -e 's/^repo_rev=.*$/repo_rev=%{version}%{git_ver}/' \ -e 's/^date=.*$/date="OpenMPI %{version} Distribution for SUSE"/' VERSION @@ -414,8 +411,10 @@ sed -i -e 's/^greek=.*$/greek=%{git_ver}/' -e 's/^repo_rev=.*$/repo_rev=%{versio ############################################################################# %build +# make build reproducible export USER=OBS export HOSTNAME=OBS +# OBS sets SOURCE_DATE_EPOCH %global _lto_cflags %{_lto_cflags} -ffat-lto-objects %{?with_hpc:%hpc_debug} ./autogen.pl --force diff --git a/reproducible.patch b/reproducible.patch deleted file mode 100644 index 40afb69..0000000 --- a/reproducible.patch +++ /dev/null @@ -1,126 +0,0 @@ -Author: Bernhard M. Wiedemann -Date: 2017-06-29 - -make package build reproducible -by using fixed date + hostname - -https://github.com/open-mpi/ompi/issues/3759 -https://bugzilla.opensuse.org/show_bug.cgi?id=1047218 packages do not build reproducibly from including build time -https://bugzilla.opensuse.org/show_bug.cgi?id=1084909 +hostname - -Index: openmpi-4.0.0/autogen.pl -=================================================================== ---- openmpi-4.0.0.orig/autogen.pl -+++ openmpi-4.0.0/autogen.pl -@@ -85,7 +85,7 @@ if ($^O eq "solaris") { - } - - $username = getpwuid($>); --$full_hostname = `hostname`; -+$full_hostname = "openSUSEnohostname"; - chomp($full_hostname); - $hostname = $full_hostname; - $hostname =~ s/^([\w\-]+)\..+/\1/; -@@ -1190,7 +1190,7 @@ if (-e "orcm") { - - #--------------------------------------------------------------------------- - --$full_hostname = `hostname`; -+$full_hostname = "openSUSEnohostname"; - chomp($full_hostname); - - $m4 = "dnl -Index: openmpi-4.0.0/config/opal_functions.m4 -=================================================================== ---- openmpi-4.0.0.orig/config/opal_functions.m4 -+++ openmpi-4.0.0/config/opal_functions.m4 -@@ -94,9 +94,9 @@ EOF - # Save some stats about this build - # - --OPAL_CONFIGURE_USER="`whoami`" --OPAL_CONFIGURE_HOST="`(hostname || uname -n) 2> /dev/null | sed 1q`" --OPAL_CONFIGURE_DATE="`date`" -+OPAL_CONFIGURE_USER="openSUSEnowhoami" -+OPAL_CONFIGURE_HOST="openSUSEnohostname" -+OPAL_CONFIGURE_DATE="openSUSEnodate" - - OPAL_LIBNL_SANITY_INIT - -@@ -116,9 +116,9 @@ AC_DEFUN([OPAL_BASIC_SETUP],[ - # Save some stats about this build - # - --OPAL_CONFIGURE_USER="`whoami`" --OPAL_CONFIGURE_HOST="`(hostname || uname -n) 2> /dev/null | sed 1q`" --OPAL_CONFIGURE_DATE="`date`" -+OPAL_CONFIGURE_USER="openSUSEnowhoami" -+OPAL_CONFIGURE_HOST="openSUSEnohostname" -+OPAL_CONFIGURE_DATE="openSUSEnodate" - - # - # Make automake clean emacs ~ files for "make clean" -Index: openmpi-4.0.0/config/opal_get_version.m4 -=================================================================== ---- openmpi-4.0.0.orig/config/opal_get_version.m4 -+++ openmpi-4.0.0/config/opal_get_version.m4 -@@ -91,7 +91,7 @@ m4_define([OPAL_GET_VERSION],[ - $2_REPO_REV=`git describe --tags --always` - fi - else -- $2_REPO_REV="date`date '+%Y-%m-%d'`" -+ $2_REPO_REV="date" - fi - fi - -Index: openmpi-4.0.0/ompi/tools/ompi_info/Makefile.am -=================================================================== ---- openmpi-4.0.0.orig/ompi/tools/ompi_info/Makefile.am -+++ openmpi-4.0.0/ompi/tools/ompi_info/Makefile.am -@@ -27,9 +27,9 @@ AM_CFLAGS = \ - -DOPAL_CONFIGURE_USER="\"@OPAL_CONFIGURE_USER@\"" \ - -DOPAL_CONFIGURE_HOST="\"@OPAL_CONFIGURE_HOST@\"" \ - -DOPAL_CONFIGURE_DATE="\"@OPAL_CONFIGURE_DATE@\"" \ -- -DOMPI_BUILD_USER="\"$$USER\"" \ -- -DOMPI_BUILD_HOST="\"`(hostname || uname -n) 2> /dev/null | sed 1q`\"" \ -- -DOMPI_BUILD_DATE="\"`date`\"" \ -+ -DOMPI_BUILD_USER="\"USER\"" \ -+ -DOMPI_BUILD_HOST="\"openSUSEnohostname\"" \ -+ -DOMPI_BUILD_DATE="\"`date -u -r ../../../NEWS`\"" \ - -DOMPI_BUILD_CFLAGS="\"@CFLAGS@\"" \ - -DOMPI_BUILD_CPPFLAGS="\"@CPPFLAGS@\"" \ - -DOMPI_BUILD_CXXFLAGS="\"@CXXFLAGS@\"" \ -Index: openmpi-4.0.0/orte/tools/orte-info/Makefile.am -=================================================================== ---- openmpi-4.0.0.orig/orte/tools/orte-info/Makefile.am -+++ openmpi-4.0.0/orte/tools/orte-info/Makefile.am -@@ -24,9 +24,9 @@ AM_CFLAGS = \ - -DOPAL_CONFIGURE_USER="\"@OPAL_CONFIGURE_USER@\"" \ - -DOPAL_CONFIGURE_HOST="\"@OPAL_CONFIGURE_HOST@\"" \ - -DOPAL_CONFIGURE_DATE="\"@OPAL_CONFIGURE_DATE@\"" \ -- -DOMPI_BUILD_USER="\"$$USER\"" \ -- -DOMPI_BUILD_HOST="\"`(hostname || uname -n) | sed 1q`\"" \ -- -DOMPI_BUILD_DATE="\"`date`\"" \ -+ -DOMPI_BUILD_USER="\"USER\"" \ -+ -DOMPI_BUILD_HOST="\"openSUSEnohostname\"" \ -+ -DOMPI_BUILD_DATE="\"`date -u -r ../../../NEWS`\"" \ - -DOMPI_BUILD_CFLAGS="\"@CFLAGS@\"" \ - -DOMPI_BUILD_CPPFLAGS="\"@CPPFLAGS@\"" \ - -DOMPI_BUILD_CXXFLAGS="\"@CXXFLAGS@\"" \ -Index: openmpi-4.0.0/oshmem/tools/oshmem_info/Makefile.am -=================================================================== ---- openmpi-4.0.0.orig/oshmem/tools/oshmem_info/Makefile.am -+++ openmpi-4.0.0/oshmem/tools/oshmem_info/Makefile.am -@@ -16,9 +16,9 @@ AM_CPPFLAGS = \ - -DOPAL_CONFIGURE_USER="\"@OPAL_CONFIGURE_USER@\"" \ - -DOPAL_CONFIGURE_HOST="\"@OPAL_CONFIGURE_HOST@\"" \ - -DOPAL_CONFIGURE_DATE="\"@OPAL_CONFIGURE_DATE@\"" \ -- -DOMPI_BUILD_USER="\"$$USER\"" \ -- -DOMPI_BUILD_HOST="\"`(hostname || uname -n) 2> /dev/null | sed 1q`\"" \ -- -DOMPI_BUILD_DATE="\"`date`\"" \ -+ -DOMPI_BUILD_USER="\"USER\"" \ -+ -DOMPI_BUILD_HOST="\"openSUSEnohostname\"" \ -+ -DOMPI_BUILD_DATE="\"`date -u -r ../../../NEWS`\"" \ - -DOMPI_BUILD_CFLAGS="\"@CFLAGS@\"" \ - -DOMPI_BUILD_CPPFLAGS="\"@CPPFLAGS@\"" \ - -DOMPI_BUILD_CXXFLAGS="\"@CXXFLAGS@\"" \