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Accepting request 910367 from home:bnavigator:branches:devel:languages:python:numeric

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- Update to version 4.3.post1
  Astropy 4.3 is a major release that adds significant new
  functionality since the 4.2.x series of releases.
  * Transformations to AltAz are now much more precise (and faster)
  * Improvements in making Astropy thread-safe
  * Performance improvements to sigma clipping
  * Changes in the Time and IERS leap second handling
  * Support for multidimensional and object columns in ECSV
  * Support for reading and writing tables to QDP format
  * Append table to existing FITS file
  * General masked class for Quantity and other ndarray subclasses
  * Configuration file improvements
  * Support for different solvers and bracket option in z_at_value
  * Full changelog:
    https://docs.astropy.org/en/stable/changelog.html
- Drop patch and files merged upstream:
  * astropy-pr11260+pr11549-wcs76.patch
  * dss.14.29.56-62.41.05.fits.gz
  * tab-time-last-axis.fits
- Use bundled cfitsio for s390x, Power and ARM
- Increase Hypothesis test deadline to 5s

OBS-URL: https://build.opensuse.org/request/show/910367
OBS-URL: https://build.opensuse.org/package/show/devel:languages:python:numeric/python-astropy?expand=0&rev=56
This commit is contained in:
Benjamin Greiner 2021-08-05 19:04:41 +00:00 committed by Git OBS Bridge
parent 5a1bf286e8
commit d78775aa48
8 changed files with 79 additions and 41140 deletions
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2
.gitattributes vendored
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@ -21,5 +21,3 @@
*.xz filter=lfs diff=lfs merge=lfs -text *.xz filter=lfs diff=lfs merge=lfs -text
*.zip filter=lfs diff=lfs merge=lfs -text *.zip filter=lfs diff=lfs merge=lfs -text
*.zst filter=lfs diff=lfs merge=lfs -text *.zst filter=lfs diff=lfs merge=lfs -text
## Specific LFS patterns
tab-time-last-axis.fits filter=lfs diff=lfs merge=lfs -text

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astropy-4.2.1.tar.gz
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41103
astropy-pr11260+pr11549-wcs76.patch
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size 13277

25
python-astropy.changes
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@ -1,3 +1,28 @@
-------------------------------------------------------------------
Thu Aug 5 14:04:16 UTC 2021 - Ben Greiner <code@bnavigator.de>
- Update to version 4.3.post1
Astropy 4.3 is a major release that adds significant new
functionality since the 4.2.x series of releases.
* Transformations to AltAz are now much more precise (and faster)
* Improvements in making Astropy thread-safe
* Performance improvements to sigma clipping
* Changes in the Time and IERS leap second handling
* Support for multidimensional and object columns in ECSV
* Support for reading and writing tables to QDP format
* Append table to existing FITS file
* General masked class for Quantity and other ndarray subclasses
* Configuration file improvements
* Support for different solvers and bracket option in z_at_value
* Full changelog:
https://docs.astropy.org/en/stable/changelog.html
- Drop patch and files merged upstream:
* astropy-pr11260+pr11549-wcs76.patch
* dss.14.29.56-62.41.05.fits.gz
* tab-time-last-axis.fits
- Use bundled cfitsio for s390x, Power and ARM
- Increase Hypothesis test deadline to 5s
------------------------------------------------------------------- -------------------------------------------------------------------
Sun Jul 4 13:26:14 UTC 2021 - Ben Greiner <code@bnavigator.de> Sun Jul 4 13:26:14 UTC 2021 - Ben Greiner <code@bnavigator.de>

77
python-astropy.spec
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@ -27,45 +27,59 @@
%define binaries fitsdiff fitsheader fitscheck fitsinfo fits2bitmap samp_hub showtable volint wcslint %define binaries fitsdiff fitsheader fitscheck fitsinfo fits2bitmap samp_hub showtable volint wcslint
%if 0%{suse_version} <= 1500 # backwards compatibility for --without systemlibs
# Use the bundled libraries for Leap 15.X, because the versions in the repos are too old
%bcond_with systemlibs
%else
%bcond_without systemlibs %bcond_without systemlibs
%if 0%{suse_version} <= 1500 || ! %{with systemlibs}
# Use the bundled libraries for Leap 15.X, because the versions in the repos are too old
%bcond_with system_cfitsio
%bcond_with system_expat
%bcond_with system_wcslib
%else
%ifarch s390x %power64 %arm32 %arm64
# cfitsio 4 not compatible on these platforms (?)
%bcond_with system_cfitsio
%else
%bcond_without system_cfitsio
%endif %endif
%if %{with systemlibs} %bcond_without system_expat
%define unbundle_libs export ASTROPY_USE_SYSTEM_CFITSIO=1 \ %bcond_without system_wcslib
export ASTROPY_USE_SYSTEM_EXPAT=1 \
export ASTROPY_USE_SYSTEM_WCSLIB=1
%endif %endif
%if %{with system_cfitsio}
%define unbundle_cfitsio export ASTROPY_USE_SYSTEM_CFITSIO=1
%endif
%if %{with system_expat}
%define unbundle_expat export ASTROPY_USE_SYSTEM_EXPAT=1
%endif
%if %{with system_wcslib}
%define unbundle_wcs export ASTROPY_USE_SYSTEM_WCSLIB=1
%endif
%define unbundle_libs %{?unbundle_cfitsio} \
%{?unbundle_expat} \
%{?unbundle_wcs}
%{?!python_module:%define python_module() python3-%{**}} %{?!python_module:%define python_module() python3-%{**}}
%define skip_python2 1 %define skip_python2 1
# upcoming python3 multiflavor: minimum supported python is 3.7 # upcoming python3 multiflavor: minimum supported python is 3.7
%define skip_python36 1 %define skip_python36 1
Name: python-astropy%{psuffix} Name: python-astropy%{psuffix}
Version: 4.2.1 Version: 4.3.post1
Release: 0 Release: 0
Summary: Community-developed python astronomy tools Summary: Community-developed python astronomy tools
License: BSD-3-Clause License: BSD-3-Clause
URL: https://astropy.org URL: https://astropy.org
Source: https://files.pythonhosted.org/packages/source/a/astropy/astropy-%{version}.tar.gz Source: https://files.pythonhosted.org/packages/source/a/astropy/astropy-%{version}.tar.gz
# belongs to Patch1 -- gh/astropy/astropy#11260
Source1: https://github.com/dhomeier/astropy/raw/wcs-distortion-headers/astropy/wcs/tests/data/dss.14.29.56-62.41.05.fits.gz
# belongs to Patch1 -- gh/astropy/astropy#11549
Source2: https://github.com/mcara/astropy/raw/wcslib7p6/astropy/wcs/tests/data/tab-time-last-axis.fits
# Mark wcs headers as false positives for devel-file-in-non-devel-package # Mark wcs headers as false positives for devel-file-in-non-devel-package
# These are used by the python files so they must be available. # These are used by the python files so they must be available.
Source100: python-astropy-rpmlintrc Source100: python-astropy-rpmlintrc
# PATCH-FIX-UPSTREAM astropy-pr11260+pr11549-wcs76.patch -- gh/astropy/astropy#11260 + gh/astropy/astropy#11549 # https://docs.astropy.org/en/v4.3post1/install.html#requirements
Patch1: astropy-pr11260+pr11549-wcs76.patch BuildRequires: %{python_module Cython >= 0.29.22}
# https://docs.astropy.org/en/v4.1/install.html#requirements
BuildRequires: %{python_module Cython >= 0.21}
BuildRequires: %{python_module Jinja2} BuildRequires: %{python_module Jinja2}
BuildRequires: %{python_module devel >= 3.7} BuildRequires: %{python_module devel >= 3.7}
BuildRequires: %{python_module extension-helpers} BuildRequires: %{python_module extension-helpers}
BuildRequires: %{python_module numpy-devel >= 1.17} BuildRequires: %{python_module numpy-devel >= 1.17}
BuildRequires: %{python_module pyerfa} BuildRequires: %{python_module pyerfa >= 1.7.3}
BuildRequires: %{python_module setuptools_scm} BuildRequires: %{python_module setuptools_scm}
BuildRequires: %{python_module setuptools} BuildRequires: %{python_module setuptools}
BuildRequires: fdupes BuildRequires: fdupes
@ -74,7 +88,7 @@ BuildRequires: pkgconfig
BuildRequires: python-rpm-macros BuildRequires: python-rpm-macros
Requires: python-dbm Requires: python-dbm
Requires: python-numpy >= 1.17 Requires: python-numpy >= 1.17
Requires: python-pyerfa Requires: python-pyerfa >= 1.7.3
Requires(post): update-alternatives Requires(post): update-alternatives
Requires(postun):update-alternatives Requires(postun):update-alternatives
Recommends: libxml2-tools Recommends: libxml2-tools
@ -93,9 +107,13 @@ Recommends: python-scipy >= 1.1
Recommends: python-setuptools Recommends: python-setuptools
Recommends: python-sortedcontainers Recommends: python-sortedcontainers
Conflicts: perl-Data-ShowTable Conflicts: perl-Data-ShowTable
%if %{with systemlibs} %if %{with system_cfitsio}
BuildRequires: pkgconfig(cfitsio) BuildRequires: pkgconfig(cfitsio)
%endif
%if %{with system_expat}
BuildRequires: pkgconfig(expat) BuildRequires: pkgconfig(expat)
%endif
%if %{with system_wcslib}
BuildRequires: pkgconfig(wcslib) >= 7 BuildRequires: pkgconfig(wcslib) >= 7
%endif %endif
%if %{with test} %if %{with test}
@ -118,8 +136,9 @@ BuildRequires: libxml2-tools
# SECTION test requirements # SECTION test requirements
# We need the compiled package for testing # We need the compiled package for testing
BuildRequires: %{python_module astropy = %{version}} BuildRequires: %{python_module astropy = %{version}}
BuildRequires: %{python_module ipython} BuildRequires: %{python_module ipython >= 4.2}
BuildRequires: %{python_module objgraph} BuildRequires: %{python_module objgraph}
BuildRequires: %{python_module packaging}
BuildRequires: %{python_module pytest-astropy} BuildRequires: %{python_module pytest-astropy}
BuildRequires: %{python_module pytest-mpl} BuildRequires: %{python_module pytest-mpl}
BuildRequires: %{python_module pytest-xdist} BuildRequires: %{python_module pytest-xdist}
@ -139,14 +158,16 @@ managing them.
%prep %prep
%autosetup -p1 -n astropy-%{version} %autosetup -p1 -n astropy-%{version}
cp %{SOURCE1} %{SOURCE2} astropy/wcs/tests/data/
%if %{with systemlibs}
# Make sure bundled libs are not used # Make sure bundled libs are not used
%if %{with system_cfitsio}
rm -rf cextern/cfitsio rm -rf cextern/cfitsio
%endif
%if %{with system_expat}
rm -rf cextern/expat rm -rf cextern/expat
rm -rf cextern/wcslib
rm licenses/EXPAT_LICENSE.rst rm licenses/EXPAT_LICENSE.rst
%endif
%if %{with system_wcslib}
rm -rf cextern/wcslib
rm licenses/WCSLIB_LICENSE.rst rm licenses/WCSLIB_LICENSE.rst
%endif %endif
@ -155,7 +176,7 @@ sed -i "/enable_deprecations_as_exceptions(/,/)/ d" astropy/conftest.py
# increase test deadline for slow obs executions (e.g. on s390x) # increase test deadline for slow obs executions (e.g. on s390x)
echo " echo "
import hypothesis import hypothesis
hypothesis.settings.register_profile('obs', deadline=2000) hypothesis.settings.register_profile('obs', deadline=5000)
" >> astropy/conftest.py " >> astropy/conftest.py
%build %build
@ -178,6 +199,10 @@ done
# doctest failure because of precision errors # doctest failure because of precision errors
donttest+=" or bayesian_info_criterion_lsq" donttest+=" or bayesian_info_criterion_lsq"
%endif %endif
%ifarch %arm32
# gh#astropy/astropy#12017
donttest+=" or test_stats"
%endif
testselect_expr="${donttest:+-k \"not (${donttest# or })\"}" testselect_expr="${donttest:+-k \"not (${donttest# or })\"}"
# http://docs.astropy.org/en/latest/development/testguide.html#running-tests # http://docs.astropy.org/en/latest/development/testguide.html#running-tests
# running pytest directly would require building the extensions inplace # running pytest directly would require building the extensions inplace

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tab-time-last-axis.fits
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@ -1,3 +0,0 @@
version https://git-lfs.github.com/spec/v1
oid sha256:d2913b3cc917dcec8f9566c20b06acdfa610acca2087578d2097f69f6d710561
size 14400