Accepting request 951934 from devel:languages:python:numeric

OBS-URL: https://build.opensuse.org/request/show/951934
OBS-URL: https://build.opensuse.org/package/show/openSUSE:Factory/python-openTSNE?expand=0&rev=3

openTSNE-0.5.1-gh.tar.gz

@@ -1,3 +0,0 @@
-version https://git-lfs.github.com/spec/v1
-oid sha256:d10aa350fe041d6cbac0c4c93e16a9b0f4163f97acad78c05acc59aba9434773
-size 25650859

openTSNE-0.6.1-gh.tar.gz

@@ -0,0 +1,3 @@
+version https://git-lfs.github.com/spec/v1
+oid sha256:020caa3b210e01476c029d9faa9d1a905b8adb123a2010f5c2b91f95a25f8b37
+size 23306737

python-openTSNE.changes

@@ -1,3 +1,23 @@
+-------------------------------------------------------------------
+Fri Feb  4 16:10:13 UTC 2022 - Ben Greiner <code@bnavigator.de>
+
+- Update to 0.6.1
+  * Remove affinites from TSNE construction, allow custom
+    affinities and initialization in .fit method. This improves the
+    API when dealing with non-tabular data. This is not backwards
+    compatible.
+  * Add metric="precomputed". This includes the addition of
+    openTSNE.nearest_neighbors.PrecomputedDistanceMatrix and
+    openTSNE.nearest_neighbors.PrecomputedNeighbors.
+  * Add knn_index parameter to openTSNE.affinity classes.
+  * Add (less-than-ideal) workaround for pickling Annoy objects.
+  * Extend the range of recommended FFTW boxes up to 1000.
+  * Remove deprecated openTSNE.nearest_neighbors.BallTree.
+  * Remove deprecated openTSNE.callbacks.ErrorLogger.
+  * Remove deprecated TSNE.neighbors_method property.
+  * Add and set as default negative_gradient_method="auto".
+- Skip building on python310: gh#pavlin-policar/openTSNE#205
+
 -------------------------------------------------------------------
 Thu Apr  1 07:36:31 UTC 2021 - Bernhard Wiedemann <bwiedemann@suse.com>
 

python-openTSNE.spec

@@ -1,7 +1,7 @@
 #
 # spec file for package python-openTSNE
 #
-# Copyright (c) 2021 SUSE LLC
+# Copyright (c) 2022 SUSE LLC
 #
 # All modifications and additions to the file contributed by third parties
 # remain the property of their copyright owners, unless otherwise agreed
@@ -16,12 +16,12 @@
 #
 
 
-%{?!python_module:%define python_module() python-%{**} python3-%{**}}
+%{?!python_module:%define python_module() python3-%{**}}
 %define skip_python2 1
-# No python36-scipy in Tumbleweed
+# not compatile with Python 3.10 API: https://github.com/pavlin-policar/openTSNE/issues/205
-%define skip_python36 1
+%define skip_python310 1
 Name:           python-openTSNE
-Version:        0.5.1
+Version:        0.6.1
 Release:        0
 Summary:        Extensible, parallel implementations of t-SNE
 License:        BSD-3-Clause
@@ -29,13 +29,14 @@ URL:            https://github.com/pavlin-policar/openTSNE
 # tests are not packaged in the PyPI sdist, use GitHub instead
 Source:         %{url}/archive/v%{version}.tar.gz#/openTSNE-%{version}-gh.tar.gz
 Patch0:         python-openTSNE-disable-CPU-autodetection.patch
-BuildRequires:  python-rpm-macros
+BuildRequires:  %{python_module devel >= 3.7}
-BuildRequires:  %{python_module setuptools}
-BuildRequires:  %{python_module devel}
 BuildRequires:  %{python_module numpy-devel >= 1.16.6}
 BuildRequires:  %{python_module scikit-learn >= 0.20}
 BuildRequires:  %{python_module scipy}
+BuildRequires:  %{python_module setuptools}
 BuildRequires:  c++_compiler
+BuildRequires:  fftw3-devel
+BuildRequires:  python-rpm-macros
 # SECTION test requirements
 BuildRequires:  %{python_module pytest}
 # /SECTION