diff --git a/openTSNE-0.5.1-gh.tar.gz b/openTSNE-0.5.1-gh.tar.gz deleted file mode 100644 index 46c6363..0000000 --- a/openTSNE-0.5.1-gh.tar.gz +++ /dev/null @@ -1,3 +0,0 @@ -version https://git-lfs.github.com/spec/v1 -oid sha256:d10aa350fe041d6cbac0c4c93e16a9b0f4163f97acad78c05acc59aba9434773 -size 25650859 diff --git a/openTSNE-0.6.1-gh.tar.gz b/openTSNE-0.6.1-gh.tar.gz new file mode 100644 index 0000000..e74b258 --- /dev/null +++ b/openTSNE-0.6.1-gh.tar.gz @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:020caa3b210e01476c029d9faa9d1a905b8adb123a2010f5c2b91f95a25f8b37 +size 23306737 diff --git a/python-openTSNE.changes b/python-openTSNE.changes index ccca8ba..31d1b9c 100644 --- a/python-openTSNE.changes +++ b/python-openTSNE.changes @@ -1,3 +1,23 @@ +------------------------------------------------------------------- +Fri Feb 4 16:10:13 UTC 2022 - Ben Greiner + +- Update to 0.6.1 + * Remove affinites from TSNE construction, allow custom + affinities and initialization in .fit method. This improves the + API when dealing with non-tabular data. This is not backwards + compatible. + * Add metric="precomputed". This includes the addition of + openTSNE.nearest_neighbors.PrecomputedDistanceMatrix and + openTSNE.nearest_neighbors.PrecomputedNeighbors. + * Add knn_index parameter to openTSNE.affinity classes. + * Add (less-than-ideal) workaround for pickling Annoy objects. + * Extend the range of recommended FFTW boxes up to 1000. + * Remove deprecated openTSNE.nearest_neighbors.BallTree. + * Remove deprecated openTSNE.callbacks.ErrorLogger. + * Remove deprecated TSNE.neighbors_method property. + * Add and set as default negative_gradient_method="auto". +- Skip building on python310: gh#pavlin-policar/openTSNE#205 + ------------------------------------------------------------------- Thu Apr 1 07:36:31 UTC 2021 - Bernhard Wiedemann diff --git a/python-openTSNE.spec b/python-openTSNE.spec index fdc931f..c60156a 100644 --- a/python-openTSNE.spec +++ b/python-openTSNE.spec @@ -1,7 +1,7 @@ # # spec file for package python-openTSNE # -# Copyright (c) 2021 SUSE LLC +# Copyright (c) 2022 SUSE LLC # # All modifications and additions to the file contributed by third parties # remain the property of their copyright owners, unless otherwise agreed @@ -16,12 +16,12 @@ # -%{?!python_module:%define python_module() python-%{**} python3-%{**}} +%{?!python_module:%define python_module() python3-%{**}} %define skip_python2 1 -# No python36-scipy in Tumbleweed -%define skip_python36 1 +# not compatile with Python 3.10 API: https://github.com/pavlin-policar/openTSNE/issues/205 +%define skip_python310 1 Name: python-openTSNE -Version: 0.5.1 +Version: 0.6.1 Release: 0 Summary: Extensible, parallel implementations of t-SNE License: BSD-3-Clause @@ -29,13 +29,14 @@ URL: https://github.com/pavlin-policar/openTSNE # tests are not packaged in the PyPI sdist, use GitHub instead Source: %{url}/archive/v%{version}.tar.gz#/openTSNE-%{version}-gh.tar.gz Patch0: python-openTSNE-disable-CPU-autodetection.patch -BuildRequires: python-rpm-macros -BuildRequires: %{python_module setuptools} -BuildRequires: %{python_module devel} +BuildRequires: %{python_module devel >= 3.7} BuildRequires: %{python_module numpy-devel >= 1.16.6} BuildRequires: %{python_module scikit-learn >= 0.20} BuildRequires: %{python_module scipy} +BuildRequires: %{python_module setuptools} BuildRequires: c++_compiler +BuildRequires: fftw3-devel +BuildRequires: python-rpm-macros # SECTION test requirements BuildRequires: %{python_module pytest} # /SECTION