Accepting request 1160837 from devel:languages:python:numeric

- update to 1.0.1:
  * setup.py maintenance
  * drop Python 3.6 support
  * correctly implement dof parameter in exact BH implementation
- drop get-numpy-include.patch (upstream)

  * Given the longtime stability of openTSNE, it is only fitting

OBS-URL: https://build.opensuse.org/request/show/1160837
OBS-URL: https://build.opensuse.org/package/show/openSUSE:Factory/python-openTSNE?expand=0&rev=6

get-numpy-include.patch

@@ -1,33 +0,0 @@
-From 07d8ad1f89356dc77a503071a16516873f4d4e30 Mon Sep 17 00:00:00 2001
-From: =?UTF-8?q?Pavlin=20Poli=C4=8Dar?= <pavlin.g.p@gmail.com>
-Date: Sat, 19 Aug 2023 11:29:35 +0200
-Subject: [PATCH] Fix #248: get_numpy_include class error in new pip
-
----
- setup.py | 13 +++----------
- 1 file changed, 3 insertions(+), 10 deletions(-)
-
-diff --git a/setup.py b/setup.py
-index 0f6a3d5..e44111c 100644
---- a/setup.py
-+++ b/setup.py
-@@ -55,16 +55,9 @@ def run(self):
-             writer.write(body, resources, nb_name)
- 
- 
--class get_numpy_include:
--    """Helper class to determine the numpy include path
--
--    The purpose of this class is to postpone importing numpy until it is
--    actually installed, so that the ``get_include()`` method can be invoked.
--
--    """
--    def __str__(self):
--        import numpy
--        return numpy.get_include()
-+def get_numpy_include():
-+    import numpy
-+    return numpy.get_include()
- 
- 
- def get_include_dirs():

openTSNE-1.0.0-gh.tar.gz

@@ -1,3 +0,0 @@
-version https://git-lfs.github.com/spec/v1
-oid sha256:31de08ea24dbfccec756535d5b9c3aa72cdcaad1bad2f505de6993328743f4f0
-size 22643133

openTSNE-1.0.1-gh.tar.gz

@@ -0,0 +1,3 @@
+version https://git-lfs.github.com/spec/v1
+oid sha256:525b3e33716b67c577a3c4567627ab6388ea61d5dd0b230c87e434f3c7268e1d
+size 22107255

python-openTSNE-disable-CPU-autodetection.patch

@@ -8,11 +8,11 @@ to allow people to run it on >50% of systems,
 but also to use CPU instructions available since 10+ years
 to speed up processing.
 
-diff --git a/setup.py b/setup.py
-index c00d331..35542b6 100644
---- a/setup.py
-+++ b/setup.py
-@@ -168,9 +168,9 @@ class CythonBuildExt(build_ext):
+Index: openTSNE-1.0.1/setup.py
+===================================================================
+--- openTSNE-1.0.1.orig/setup.py
++++ openTSNE-1.0.1/setup.py
+@@ -155,9 +155,9 @@ class CythonBuildExt(build_ext):
          # package is being built locally, this is desired
          if not ("AZURE_BUILD" in os.environ or "CONDA_BUILD" in os.environ):
              if platform.machine() == "ppc64le":
@@ -22,5 +22,5 @@ index c00d331..35542b6 100644
 -                extra_compile_args += ["-march=native"]
 +                extra_compile_args += ["-march=corei7"]
  
-         # We will disable openmp flags if the compiler doesn"t support it. This
+         # We will disable openmp flags if the compiler doesn't support it. This
          # is only really an issue with OSX clang

python-openTSNE.changes

@@ -1,3 +1,12 @@
+-------------------------------------------------------------------
+Fri Mar 22 20:48:51 UTC 2024 - Dirk Müller <dmueller@suse.com>
+
+- update to 1.0.1:
+  * setup.py maintenance
+  * drop Python 3.6 support
+  * correctly implement dof parameter in exact BH implementation
+- drop get-numpy-include.patch (upstream)
+
 -------------------------------------------------------------------
 Thu Sep 14 13:26:03 UTC 2023 - Markéta Machová <mmachova@suse.com>
 

python-openTSNE.spec

@@ -1,7 +1,7 @@
 #
 # spec file for package python-openTSNE
 #
-# Copyright (c) 2023 SUSE LLC
+# Copyright (c) 2024 SUSE LLC
 #
 # All modifications and additions to the file contributed by third parties
 # remain the property of their copyright owners, unless otherwise agreed
@@ -16,10 +16,9 @@
 #
 
 
-%{?!python_module:%define python_module() python3-%{**}}
-%define skip_python2 1
+%{?sle15_python_module_pythons}
 Name:           python-openTSNE
-Version:        1.0.0
+Version:        1.0.1
 Release:        0
 Summary:        Extensible, parallel implementations of t-SNE
 License:        BSD-3-Clause
@@ -27,8 +26,6 @@ URL:            https://github.com/pavlin-policar/openTSNE
 # tests are not packaged in the PyPI sdist, use GitHub instead
 Source:         %{url}/archive/v%{version}.tar.gz#/openTSNE-%{version}-gh.tar.gz
 Patch0:         python-openTSNE-disable-CPU-autodetection.patch
-# PATCH-FIX-UPSTREAM https://github.com/pavlin-policar/openTSNE/commit/07d8ad1f89356dc77a503071a16516873f4d4e30 Fix #248: get_numpy_include class error in new pip
-Patch1:         get-numpy-include.patch
 BuildRequires:  %{python_module Cython}
 BuildRequires:  %{python_module devel >= 3.7}
 BuildRequires:  %{python_module numpy-devel >= 1.16.6}