forked from pool/python-xarray
6654bf4c0c
- This release brings a major upgrade to :py:func:`xarray.concat`, many bug fixes,:
- and a bump in supported dependency versions. Thanks to our 11 contributors:
- Aron Gergely, Deepak Cherian, Illviljan, James Bourbeau, Joe Hamman,:
- Justus Magin, Hauke Schulz, Kai Mühlbauer, Ken Mankoff, Spencer Clark, Tom Nicholas.:
- Breaking changes:
- Support for ``python 3.8`` has been dropped and the minimum versions of some
dependencies were changed (:pull:`7461`):
===================== ========= ========
Package Old New
===================== ========= ========
python 3.8 3.9
numpy 1.20 1.21
pandas 1.3 1.4
dask 2021.11 2022.1
distributed 2021.11 2022.1
h5netcdf 0.11 0.13
lxml 4.6 4.7
numba 5.4 5.5
===================== ========= ========
- Deprecations:
- Following pandas, the `closed` parameters of :py:func:`cftime_range` and
:py:func:`date_range` are deprecated in favor of the `inclusive` parameters,
and will be removed in a future version of xarray (:issue:`6985`:,
:pull:`7373`).
- Bug fixes:
- :py:func:`xarray.concat` can now concatenate variables present in some datasets but
not others (:issue:`508`, :pull:`7400`).
- Handle ``keep_attrs`` option in binary operators of :py:meth:`Dataset` (:issue:`7390`, :pull:`7391`).
- Improve error message when using dask in :py:func:`apply_ufunc` with ``output_sizes`` not supplied. (:pull:`7509`)
OBS-URL: https://build.opensuse.org/package/show/devel:languages:python:numeric/python-xarray?expand=0&rev=78
127 lines
4.2 KiB
RPMSpec
127 lines
4.2 KiB
RPMSpec
#
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# spec file for package python-xarray
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#
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# Copyright (c) 2023 SUSE LLC
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#
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# All modifications and additions to the file contributed by third parties
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# remain the property of their copyright owners, unless otherwise agreed
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# upon. The license for this file, and modifications and additions to the
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# file, is the same license as for the pristine package itself (unless the
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# license for the pristine package is not an Open Source License, in which
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# case the license is the MIT License). An "Open Source License" is a
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# license that conforms to the Open Source Definition (Version 1.9)
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# published by the Open Source Initiative.
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# Please submit bugfixes or comments via https://bugs.opensuse.org/
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#
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%define skip_python38 1
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Name: python-xarray
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Version: 2023.2.0
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Release: 0
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Summary: N-D labeled arrays and datasets in Python
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License: Apache-2.0
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URL: https://github.com/pydata/xarray
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Source: https://files.pythonhosted.org/packages/source/x/xarray/xarray-%{version}.tar.gz
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# PATCH-FEATURE-UPSTREAM local_dataset.patch gh#pydata/xarray#5377 mcepl@suse.com
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# fix xr.tutorial.open_dataset to work with the preloaded cache.
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Patch0: local_dataset.patch
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BuildRequires: %{python_module base >= 3.9}
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BuildRequires: %{python_module numpy-devel >= 1.20}
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BuildRequires: %{python_module packaging >= 21.3}
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BuildRequires: %{python_module pandas >= 1.3}
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BuildRequires: %{python_module setuptools_scm}
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BuildRequires: %{python_module setuptools}
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BuildRequires: fdupes
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BuildRequires: python-rpm-macros
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Requires: python-numpy >= 1.21
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Requires: python-packaging >= 21.3
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Requires: python-pandas >= 1.4
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Provides: python-xray = %{version}
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Obsoletes: python-xray < %{version}
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BuildArch: noarch
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# SECTION extras accel
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Recommends: python-scipy
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Recommends: python-bottleneck
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Recommends: python-flox
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Recommends: python-numbagg
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# /SECTION
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# SECTION extras parallalel
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Suggests: python-dask-complete
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# /SECTION
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# SECTION extras viz
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Suggests: python-matplotlib
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Suggests: python-seaborn
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Suggests: python-nc-time-axis
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#/SECTION
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# SECTION extras io
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Suggests: python-netCDF4
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Suggests: python-h5netcdf
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Suggests: (python-pydap if python-base < 3.10)
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Suggests: python-zarr
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Suggests: python-fsspec
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Suggests: python-cftime
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Suggests: python-rasterio
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Suggests: python-cfgrib
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Suggests: python-pooch
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#/SECTION
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# SECTION tests
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BuildRequires: %{python_module Bottleneck}
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# not available on python 3.11
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#BuildRequires: %%{python_module dask-dataframe}
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#BuildRequires: %%{python_module dask-diagnostics}
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BuildRequires: %{python_module h5netcdf}
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BuildRequires: %{python_module matplotlib}
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BuildRequires: %{python_module netCDF4}
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BuildRequires: %{python_module pooch}
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BuildRequires: %{python_module pytest-xdist}
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BuildRequires: %{python_module pytest}
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BuildRequires: %{python_module scipy}
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BuildRequires: %{python_module zarr}
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# /SECTION
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%python_subpackages
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%description
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xarray (formerly xray) is a python-pandas-like and pandas-compatible
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toolkit for analytics on multi-dimensional arrays. It provides
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N-dimensional variants of the python-pandas labeled data structures,
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rather than the tabular data that pandas uses.
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The Common Data Model for self-describing scientific data is used.
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The dataset is an in-memory representation of a netCDF file.
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%prep
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%autosetup -p1 -n xarray-%{version}
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chmod -x xarray/util/print_versions.py
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%build
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%python_build
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%install
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%python_install
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%python_expand %fdupes %{buildroot}%{$python_sitelib}
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%check
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# OOM crashes the whole vm or even the local host running osc: https://github.com/pydata/xarray/issues/6854
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donttest="nczarr"
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if [ $(getconf LONG_BIT) -eq 32 ]; then
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# https://github.com/pydata/xarray/issues/5341
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# https://github.com/pydata/xarray/issues/5375
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# still precision problems in 2022.11.0
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donttest="$donttest or (test_interpolate_chunk_advanced and linear)"
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# tests for 64bit types
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donttest="$donttest or TestZarrDictStore or TestZarrDirectoryStore"
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fi
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%pytest -n auto -rsEf -k "not ($donttest)" xarray
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%files %{python_files}
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%doc README.md
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%license LICENSE licenses/
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%{python_sitelib}/xarray
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%exclude %{python_sitelib}/xarray/tests
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%{python_sitelib}/xarray-%{version}*-info
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%changelog
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