# # spec file for package python3-espressomd # # Copyright (c) 2020 SUSE LLC # Copyright (c) 2014 Christoph Junghans # # All modifications and additions to the file contributed by third parties # remain the property of their copyright owners, unless otherwise agreed # upon. The license for this file, and modifications and additions to the # file, is the same license as for the pristine package itself (unless the # license for the pristine package is not an Open Source License, in which # case the license is the MIT License). An "Open Source License" is a # license that conforms to the Open Source Definition (Version 1.9) # published by the Open Source Initiative. # Please submit bugfixes or comments via https://bugs.opensuse.org/ # # Build with OpenMPI %if 0%{?sle_version} == 0 %define mpiver openmpi2 %else %if 0%{?sle_version} <= 120300 %define mpiver openmpi %else %if 0%{?sle_version} <= 150000 %define mpiver openmpi2 %else %define mpiver openmpi3 %endif %endif %endif %define pkgname espresso %define modname %{pkgname}md Name: python3-%{modname} Version: 4.1.2 Release: 0 Summary: Parallel simulation software for soft matter research License: GPL-3.0-or-later Group: Productivity/Scientific/Chemistry URL: http://espressomd.org Source: https://github.com/%{modname}/%{pkgname}/releases/download/%{version}/%{pkgname}-%{version}.tar.gz # PATCH-FIX-UPSTREAM 3427.patch - fix test on 586 - https://github.com/espressomd/espresso/pull/3427 Patch0: 3427.patch BuildRequires: cmake BuildRequires: fftw3-devel BuildRequires: gcc-c++ # Currently libboost_mpi-devel and hdf5 use different mpi versions # BuildRequires: hdf5-devel BuildRequires: %{mpiver}-devel BuildRequires: gsl-devel BuildRequires: python3-Cython BuildRequires: python3-devel BuildRequires: python3-numpy-devel %if 0%{?suse_version} > 1325 BuildRequires: libboost_filesystem-devel BuildRequires: libboost_mpi-devel BuildRequires: libboost_system-devel BuildRequires: libboost_test-devel %else BuildRequires: boost-devel %endif Obsoletes: libEspresso4 BuildRequires: python3-devel %description ESPResSo is a highly versatile software package for performing and analyzing scientific Molecular Dynamics many-particle simulations of coarse-grained atomistic or bead-spring models as they are used in soft-matter research in physics, chemistry and molecular biology. It can be used to simulate systems such as polymers, liquid crystals, colloids, ferrofluids and biological systems, for example DNA and lipid membranes. %prep %setup -q -n %{pkgname} %patch0 -p1 %build source %{_libdir}/mpi/gcc/%{mpiver}/bin/mpivars.sh # gh#espressomd/espresso#3396 %define _lto_cflags %{nil} # overwrite .so linker flags on SUSE distros: drop --no-undefined # we don't install {i,}pypresso scripts as they aren't needed when installing in /usr %cmake \ '-DCMAKE_SHARED_LINKER_FLAGS=-Wl,--as-needed -Wl,-z,now' \ -DLIBDIR=%{_lib} \ -DPYTHON_EXECUTABLE=%{_bindir}/python3 \ -DINSTALL_PYPRESSO=OFF %make_jobs %install %cmake_install # no devel package rm -f %{buildroot}%{_libdir}/lib*.so %check # https://github.com/espressomd/espresso/issues/3315 %ifarch i586 %define testargs ARGS='-E collision_detection' %endif LD_LIBRARY_PATH='%{buildroot}/%{python3_sitearch}/espressomd::%{_libdir}/mpi/gcc/%{mpiver}/%{_lib}' make -C build check CTEST_OUTPUT_ON_FAILURE=1 %{?testargs:%{testargs}} %files %license COPYING %doc README AUTHORS NEWS ChangeLog %{python3_sitearch}/espressomd %changelog