Files
mafft/mafft.changes
Atri Bhattacharya 3ce11d248d Accepting request 1193442 from home:vojtaeus
- Removed extensions due to license.
- Removed empty %check section.
- Main changes from version 7.273:
  - Various bug fixes.
  - Improved --localpair, --globalpair and --genafpair options.
  - Modified a subprogram to estimate the direction of nucleotide
    sequences in the --adjustdirection and --adjustdirectionaccurately
    options, to apply them to a larger number of sequences.
  - Improved handling of degenerated nucleotides.
  - Changed thresholds when working with --auto.
  - Enhanced the --text mode for non-biological data.
  - When the --adjustdirections flag is applied to RNA sequences
    (incl. u), a is flipped to u, instead of t. 
  - Improved iterative addition of sequences.
  - Added a new option, --compactmapout, for handling a large
    number of sequences in the --addfragments option.
- Updated to version 7.525.
- Added %check section to spec file.
- Updated to version 7.505.
- Used version with extensions.
- Added test data.
- Corrected pointer to ruby interpreter.
- Added readme.
- MIT license. 
- Updated to version 7.490.
- Spec file cleaned according to spec-cleaner.

OBS-URL: https://build.opensuse.org/request/show/1193442
OBS-URL: https://build.opensuse.org/package/show/science/mafft?expand=0&rev=3
2024-08-17 04:20:25 +00:00

61 lines
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-------------------------------------------------------------------
Fri Aug 2 09:19:02 UTC 2024 - Vojtech Zeisek <Vojtech.Zeisek@opensuse.org>
- Removed extensions due to license.
- Removed empty %check section.
- Main changes from version 7.273:
- Various bug fixes.
- Improved --localpair, --globalpair and --genafpair options.
- Modified a subprogram to estimate the direction of nucleotide
sequences in the --adjustdirection and --adjustdirectionaccurately
options, to apply them to a larger number of sequences.
- Improved handling of degenerated nucleotides.
- Changed thresholds when working with --auto.
- Enhanced the --text mode for non-biological data.
- When the --adjustdirections flag is applied to RNA sequences
(incl. u), a is flipped to u, instead of t.
- Improved iterative addition of sequences.
- Added a new option, --compactmapout, for handling a large
number of sequences in the --addfragments option.
-------------------------------------------------------------------
Tue Jul 16 12:07:50 UTC 2024 - Vojtech Zeisek <Vojtech.Zeisek@opensuse.org>
- Updated to version 7.525.
- Added %check section to spec file.
-------------------------------------------------------------------
Mon Dec 5 14:06:36 UTC 2022 - Vojtech Zeisek <Vojtech.Zeisek@opensuse.org>
- Updated to version 7.505.
-------------------------------------------------------------------
Fri Feb 25 13:55:15 UTC 2022 - Vojtech Zeisek <Vojtech.Zeisek@opensuse.org>
- Used version with extensions.
- Added test data.
- Corrected pointer to ruby interpreter.
-------------------------------------------------------------------
Fri Feb 25 13:12:45 UTC 2022 - Vojtech Zeisek <Vojtech.Zeisek@opensuse.org>
- Added readme.
- MIT license.
-------------------------------------------------------------------
Fri Feb 25 12:52:44 UTC 2022 - Vojtech Zeisek <Vojtech.Zeisek@opensuse.org>
- Updated to version 7.490.
- Spec file cleaned according to spec-cleaner.
-------------------------------------------------------------------
Sun Mar 20 09:13:58 UTC 2016 - mailaender@opensuse.org
- update to version 7.273
-------------------------------------------------------------------
Fri Aug 31 21:46:31 UTC 2012 - scorot@free.fr
- first package of version 6.935