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python-pegasus-wms.api/python-pegasus-wms.api.spec

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#
# spec file for package python-pegasus-wms.api
#
Accepting request 1147126 from home:bnavigator:branches:science - Update to 5.0.6 * Improve stash integration to be osdf:// aware * Handle dagman no longer inheriting user environment for the dagman job * Add support for Arm 64 architecture (aarch64) * Enable host-wide metrics collection * File dependencies between sub workflow and compute jobs broken * Planner container mount point parsing breaks on . in the dir name * request_disk is incorrectly set to MBs instead of KBs * +DAGNodeRetry for attrib=value assigment breaks on HTondor 10.0.x when direct submission is disabled * Data management between parent compute job and a sub workflow job broken * Inplace cleanup broken when a sub workflow job and a parent compute job has a data dependency - Release Notes for Pegasus 5.0.5 []Incomplete clean between ant targets - Release Notes for Pegasus 5.0.4 * Support for HTCondor 10.2 series * Improved sub workflow file handling * pegasus-analyzer should show failing jobs * pegasus-analyzer should traverse all sub workflows * File dependencies for sub workflow jobs - differentiate inputs for planner use and those for sub workflow * update python api and json schema to expose forPlanning boolean attribute with files in uses section * update java wf api to support forPlanner attribute for files * handle condor_submit updated way of specifying environment in the .dag.condor.sub file OBS-URL: https://build.opensuse.org/request/show/1147126 OBS-URL: https://build.opensuse.org/package/show/science/python-pegasus-wms.api?expand=0&rev=5
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# Copyright (c) 2024 SUSE LLC
#
# All modifications and additions to the file contributed by third parties
# remain the property of their copyright owners, unless otherwise agreed
# upon. The license for this file, and modifications and additions to the
# file, is the same license as for the pristine package itself (unless the
# license for the pristine package is not an Open Source License, in which
# case the license is the MIT License). An "Open Source License" is a
# license that conforms to the Open Source Definition (Version 1.9)
# published by the Open Source Initiative.
# Please submit bugfixes or comments via https://bugs.opensuse.org/
#
Name: python-pegasus-wms.api
Accepting request 1147126 from home:bnavigator:branches:science - Update to 5.0.6 * Improve stash integration to be osdf:// aware * Handle dagman no longer inheriting user environment for the dagman job * Add support for Arm 64 architecture (aarch64) * Enable host-wide metrics collection * File dependencies between sub workflow and compute jobs broken * Planner container mount point parsing breaks on . in the dir name * request_disk is incorrectly set to MBs instead of KBs * +DAGNodeRetry for attrib=value assigment breaks on HTondor 10.0.x when direct submission is disabled * Data management between parent compute job and a sub workflow job broken * Inplace cleanup broken when a sub workflow job and a parent compute job has a data dependency - Release Notes for Pegasus 5.0.5 []Incomplete clean between ant targets - Release Notes for Pegasus 5.0.4 * Support for HTCondor 10.2 series * Improved sub workflow file handling * pegasus-analyzer should show failing jobs * pegasus-analyzer should traverse all sub workflows * File dependencies for sub workflow jobs - differentiate inputs for planner use and those for sub workflow * update python api and json schema to expose forPlanning boolean attribute with files in uses section * update java wf api to support forPlanner attribute for files * handle condor_submit updated way of specifying environment in the .dag.condor.sub file OBS-URL: https://build.opensuse.org/request/show/1147126 OBS-URL: https://build.opensuse.org/package/show/science/python-pegasus-wms.api?expand=0&rev=5
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Version: 5.0.6
Release: 0
Summary: Pegasus Workflow Management System Python API
License: Apache-2.0
URL: http://pegasus.isi.edu
Source0: pegasus-wms.api-gh-%{version}.tar.xz
Source1: pegasus-schema-yaml-%{version}.tar.xz
Accepting request 1147126 from home:bnavigator:branches:science - Update to 5.0.6 * Improve stash integration to be osdf:// aware * Handle dagman no longer inheriting user environment for the dagman job * Add support for Arm 64 architecture (aarch64) * Enable host-wide metrics collection * File dependencies between sub workflow and compute jobs broken * Planner container mount point parsing breaks on . in the dir name * request_disk is incorrectly set to MBs instead of KBs * +DAGNodeRetry for attrib=value assigment breaks on HTondor 10.0.x when direct submission is disabled * Data management between parent compute job and a sub workflow job broken * Inplace cleanup broken when a sub workflow job and a parent compute job has a data dependency - Release Notes for Pegasus 5.0.5 []Incomplete clean between ant targets - Release Notes for Pegasus 5.0.4 * Support for HTCondor 10.2 series * Improved sub workflow file handling * pegasus-analyzer should show failing jobs * pegasus-analyzer should traverse all sub workflows * File dependencies for sub workflow jobs - differentiate inputs for planner use and those for sub workflow * update python api and json schema to expose forPlanning boolean attribute with files in uses section * update java wf api to support forPlanner attribute for files * handle condor_submit updated way of specifying environment in the .dag.condor.sub file OBS-URL: https://build.opensuse.org/request/show/1147126 OBS-URL: https://build.opensuse.org/package/show/science/python-pegasus-wms.api?expand=0&rev=5
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BuildRequires: %{python_module pip}
BuildRequires: %{python_module setuptools}
Accepting request 1147126 from home:bnavigator:branches:science - Update to 5.0.6 * Improve stash integration to be osdf:// aware * Handle dagman no longer inheriting user environment for the dagman job * Add support for Arm 64 architecture (aarch64) * Enable host-wide metrics collection * File dependencies between sub workflow and compute jobs broken * Planner container mount point parsing breaks on . in the dir name * request_disk is incorrectly set to MBs instead of KBs * +DAGNodeRetry for attrib=value assigment breaks on HTondor 10.0.x when direct submission is disabled * Data management between parent compute job and a sub workflow job broken * Inplace cleanup broken when a sub workflow job and a parent compute job has a data dependency - Release Notes for Pegasus 5.0.5 []Incomplete clean between ant targets - Release Notes for Pegasus 5.0.4 * Support for HTCondor 10.2 series * Improved sub workflow file handling * pegasus-analyzer should show failing jobs * pegasus-analyzer should traverse all sub workflows * File dependencies for sub workflow jobs - differentiate inputs for planner use and those for sub workflow * update python api and json schema to expose forPlanning boolean attribute with files in uses section * update java wf api to support forPlanner attribute for files * handle condor_submit updated way of specifying environment in the .dag.condor.sub file OBS-URL: https://build.opensuse.org/request/show/1147126 OBS-URL: https://build.opensuse.org/package/show/science/python-pegasus-wms.api?expand=0&rev=5
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BuildRequires: %{python_module wheel}
BuildRequires: python-rpm-macros
# SECTION test requirements
Accepting request 1147126 from home:bnavigator:branches:science - Update to 5.0.6 * Improve stash integration to be osdf:// aware * Handle dagman no longer inheriting user environment for the dagman job * Add support for Arm 64 architecture (aarch64) * Enable host-wide metrics collection * File dependencies between sub workflow and compute jobs broken * Planner container mount point parsing breaks on . in the dir name * request_disk is incorrectly set to MBs instead of KBs * +DAGNodeRetry for attrib=value assigment breaks on HTondor 10.0.x when direct submission is disabled * Data management between parent compute job and a sub workflow job broken * Inplace cleanup broken when a sub workflow job and a parent compute job has a data dependency - Release Notes for Pegasus 5.0.5 []Incomplete clean between ant targets - Release Notes for Pegasus 5.0.4 * Support for HTCondor 10.2 series * Improved sub workflow file handling * pegasus-analyzer should show failing jobs * pegasus-analyzer should traverse all sub workflows * File dependencies for sub workflow jobs - differentiate inputs for planner use and those for sub workflow * update python api and json schema to expose forPlanning boolean attribute with files in uses section * update java wf api to support forPlanner attribute for files * handle condor_submit updated way of specifying environment in the .dag.condor.sub file OBS-URL: https://build.opensuse.org/request/show/1147126 OBS-URL: https://build.opensuse.org/package/show/science/python-pegasus-wms.api?expand=0&rev=5
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BuildRequires: %{python_module pegasus-wms.common}
BuildRequires: %{python_module jsonschema}
BuildRequires: %{python_module pytest-mock}
BuildRequires: %{python_module pytest}
# /SECTION
BuildRequires: fdupes
Accepting request 1147126 from home:bnavigator:branches:science - Update to 5.0.6 * Improve stash integration to be osdf:// aware * Handle dagman no longer inheriting user environment for the dagman job * Add support for Arm 64 architecture (aarch64) * Enable host-wide metrics collection * File dependencies between sub workflow and compute jobs broken * Planner container mount point parsing breaks on . in the dir name * request_disk is incorrectly set to MBs instead of KBs * +DAGNodeRetry for attrib=value assigment breaks on HTondor 10.0.x when direct submission is disabled * Data management between parent compute job and a sub workflow job broken * Inplace cleanup broken when a sub workflow job and a parent compute job has a data dependency - Release Notes for Pegasus 5.0.5 []Incomplete clean between ant targets - Release Notes for Pegasus 5.0.4 * Support for HTCondor 10.2 series * Improved sub workflow file handling * pegasus-analyzer should show failing jobs * pegasus-analyzer should traverse all sub workflows * File dependencies for sub workflow jobs - differentiate inputs for planner use and those for sub workflow * update python api and json schema to expose forPlanning boolean attribute with files in uses section * update java wf api to support forPlanner attribute for files * handle condor_submit updated way of specifying environment in the .dag.condor.sub file OBS-URL: https://build.opensuse.org/request/show/1147126 OBS-URL: https://build.opensuse.org/package/show/science/python-pegasus-wms.api?expand=0&rev=5
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Requires: python-pegasus-wms.common
BuildArch: noarch
%python_subpackages
%description
This package contains the Python APIs for Pegasus WMS, including:
The DAX API (Versions 2 and 3)
The PDAX API (Version 2)
The monitoring API
The Stampede database API
The Pegasus statistics API
The Pegasus plots API
Misc. Pegasus utilities
The pegasus service, including the ensemble manager and dashboard
%prep
%setup -q -n pegasus-wms.api-gh-%{version} -b1
# replace ties to global git repository with our limited package subset
sed -i 's|version=read_version(),|version="%{version}",|' setup.py
# replaces paths in two lines
sed -i test/api/conftest.py \
-e 's|"packages/pegasus-api/test/api"|"pegasus-wms.api-gh-%{version}/test/api"|' \
-e 's|"share/pegasus/schema/yaml"|"pegasus-schema-yaml-%{version}"|'
%build
Accepting request 1147126 from home:bnavigator:branches:science - Update to 5.0.6 * Improve stash integration to be osdf:// aware * Handle dagman no longer inheriting user environment for the dagman job * Add support for Arm 64 architecture (aarch64) * Enable host-wide metrics collection * File dependencies between sub workflow and compute jobs broken * Planner container mount point parsing breaks on . in the dir name * request_disk is incorrectly set to MBs instead of KBs * +DAGNodeRetry for attrib=value assigment breaks on HTondor 10.0.x when direct submission is disabled * Data management between parent compute job and a sub workflow job broken * Inplace cleanup broken when a sub workflow job and a parent compute job has a data dependency - Release Notes for Pegasus 5.0.5 []Incomplete clean between ant targets - Release Notes for Pegasus 5.0.4 * Support for HTCondor 10.2 series * Improved sub workflow file handling * pegasus-analyzer should show failing jobs * pegasus-analyzer should traverse all sub workflows * File dependencies for sub workflow jobs - differentiate inputs for planner use and those for sub workflow * update python api and json schema to expose forPlanning boolean attribute with files in uses section * update java wf api to support forPlanner attribute for files * handle condor_submit updated way of specifying environment in the .dag.condor.sub file OBS-URL: https://build.opensuse.org/request/show/1147126 OBS-URL: https://build.opensuse.org/package/show/science/python-pegasus-wms.api?expand=0&rev=5
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%pyproject_wheel
%install
Accepting request 1147126 from home:bnavigator:branches:science - Update to 5.0.6 * Improve stash integration to be osdf:// aware * Handle dagman no longer inheriting user environment for the dagman job * Add support for Arm 64 architecture (aarch64) * Enable host-wide metrics collection * File dependencies between sub workflow and compute jobs broken * Planner container mount point parsing breaks on . in the dir name * request_disk is incorrectly set to MBs instead of KBs * +DAGNodeRetry for attrib=value assigment breaks on HTondor 10.0.x when direct submission is disabled * Data management between parent compute job and a sub workflow job broken * Inplace cleanup broken when a sub workflow job and a parent compute job has a data dependency - Release Notes for Pegasus 5.0.5 []Incomplete clean between ant targets - Release Notes for Pegasus 5.0.4 * Support for HTCondor 10.2 series * Improved sub workflow file handling * pegasus-analyzer should show failing jobs * pegasus-analyzer should traverse all sub workflows * File dependencies for sub workflow jobs - differentiate inputs for planner use and those for sub workflow * update python api and json schema to expose forPlanning boolean attribute with files in uses section * update java wf api to support forPlanner attribute for files * handle condor_submit updated way of specifying environment in the .dag.condor.sub file OBS-URL: https://build.opensuse.org/request/show/1147126 OBS-URL: https://build.opensuse.org/package/show/science/python-pegasus-wms.api?expand=0&rev=5
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%pyproject_install
%python_expand %fdupes %{buildroot}%{$python_sitelib}
%check
Accepting request 1147126 from home:bnavigator:branches:science - Update to 5.0.6 * Improve stash integration to be osdf:// aware * Handle dagman no longer inheriting user environment for the dagman job * Add support for Arm 64 architecture (aarch64) * Enable host-wide metrics collection * File dependencies between sub workflow and compute jobs broken * Planner container mount point parsing breaks on . in the dir name * request_disk is incorrectly set to MBs instead of KBs * +DAGNodeRetry for attrib=value assigment breaks on HTondor 10.0.x when direct submission is disabled * Data management between parent compute job and a sub workflow job broken * Inplace cleanup broken when a sub workflow job and a parent compute job has a data dependency - Release Notes for Pegasus 5.0.5 []Incomplete clean between ant targets - Release Notes for Pegasus 5.0.4 * Support for HTCondor 10.2 series * Improved sub workflow file handling * pegasus-analyzer should show failing jobs * pegasus-analyzer should traverse all sub workflows * File dependencies for sub workflow jobs - differentiate inputs for planner use and those for sub workflow * update python api and json schema to expose forPlanning boolean attribute with files in uses section * update java wf api to support forPlanner attribute for files * handle condor_submit updated way of specifying environment in the .dag.condor.sub file OBS-URL: https://build.opensuse.org/request/show/1147126 OBS-URL: https://build.opensuse.org/package/show/science/python-pegasus-wms.api?expand=0&rev=5
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# same output but different order in 'uses' field (full name in one string is not excluded on Leap)
donttest="test_workflow and to_subworkflow_conversion_in_write"
%pytest -v -k "not ($donttest)"
%files %{python_files}
%doc README.md
%license LICENSE
%dir %{python_sitelib}/Pegasus
%{python_sitelib}/Pegasus/api
Accepting request 1147126 from home:bnavigator:branches:science - Update to 5.0.6 * Improve stash integration to be osdf:// aware * Handle dagman no longer inheriting user environment for the dagman job * Add support for Arm 64 architecture (aarch64) * Enable host-wide metrics collection * File dependencies between sub workflow and compute jobs broken * Planner container mount point parsing breaks on . in the dir name * request_disk is incorrectly set to MBs instead of KBs * +DAGNodeRetry for attrib=value assigment breaks on HTondor 10.0.x when direct submission is disabled * Data management between parent compute job and a sub workflow job broken * Inplace cleanup broken when a sub workflow job and a parent compute job has a data dependency - Release Notes for Pegasus 5.0.5 []Incomplete clean between ant targets - Release Notes for Pegasus 5.0.4 * Support for HTCondor 10.2 series * Improved sub workflow file handling * pegasus-analyzer should show failing jobs * pegasus-analyzer should traverse all sub workflows * File dependencies for sub workflow jobs - differentiate inputs for planner use and those for sub workflow * update python api and json schema to expose forPlanning boolean attribute with files in uses section * update java wf api to support forPlanner attribute for files * handle condor_submit updated way of specifying environment in the .dag.condor.sub file OBS-URL: https://build.opensuse.org/request/show/1147126 OBS-URL: https://build.opensuse.org/package/show/science/python-pegasus-wms.api?expand=0&rev=5
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%{python_sitelib}/pegasus_wms.api-%{version}.dist-info
%changelog